SNP Profiles matching GU 125 /C

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTGGGGAATTGGTTTTAAGTCCTTGG
1._GU_221_/C___
AATTGGGGAATTGGTT__AAGTCCTTGG
2._GU_259_/C___
AATTGGGGAATTGGTTTTAAGGCCTTGG
3._GU_249_/H___
AATTGGGGAATTGGTT__AAGGCCTTGG
4._GU_133_/C___
AATTCGGGAATTGGTTTTAAGGCCTTGG
5._GU_123_/V___
AATTGGGGAATTGGTTTTAAGGCCTTGG
6._GU_226_/V___
AATTGGGGAATTGGTTTTAATTCCTTGG
7._GU_296_/H___
AATTCGGGAATTGGTTTTAATTCCTTGG
8._GU_114_/P___
AATTCCGGAGTTGGTT__AAGGCCTTGG
9._GU_219_/F___
AATTGGGGAATTGGTT__AATTCCCTGG
10._GU_171_/C___
AATTGGGGAA__GGTT__AATTCCTTGG
11._GU_310_/P___
AATTGGGGAATTGGTT__AAGGCCTTGG
12._GU_243_/H___
AATTGGGGAATTGGTT__AATTCCTTGG
13._GU_123_/V___
AATTGGGGAATTGGTT__AA__CCTTGG
14._GU_125_/C___
AATTCGGGAATTGGTTTTAAGGCCCTGG
15._GU_195_/V___
AATTGGGGAATTGGTTTTAAGGCCTTGG
16._GU_207_/H___
AATTGGGGAATTGGTTTTAATTCCTTGG
17._GU_265_/P___
AATTCGGGAATTGGTT__AAGGCCTTGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CTAACCCCAACCGGGGCCAAAATTTTAA
1._GU_221_/C___
CTAACCCCAACCGGGGCCAAAATTTTAA
2._GU_259_/C___
CCAACCCCAACCGGGGCCAAAATTTTAA
3._GU_249_/H___
CCAACCCCAACCGGGGCCAAAATTTTAA
4._GU_133_/C___
CCAACCCCGGCCGGGGCCAAAATTTTAA
5._GU_123_/V___
CCAACCCCAACCGGGGCCAAAATTCCAA
6._GU_226_/V___
CTAACCCCGGCCGGGGCCAAAATTTTAA
7._GU_296_/H___
CCAACTCCGGCCGGGGCCAAAATTCTAA
8._GU_114_/P___
CCAACCCCAGCCGGGGCCAAAATTTTAA
9._GU_219_/F___
TTAACTCCAACCGGGGCCAAAATTCTAA
10._GU_171_/C___
__AACCCCAACCGGGGCCAAAATTCTAA
11._GU_310_/P___
CTAACTCCAACCGGGGCTAAAATTCTAA
12._GU_243_/H___
CTAACCCCGGCCGGGGCCAAAATTCTAA
13._GU_123_/V___
CCAA__CC__CCGGGGCCAAAATTCTAA
14._GU_125_/C___
CCAACCCCAGCCGGGGCTAAAATTTTAA
15._GU_195_/V___
TTAACCCCAACCGGGGCCAAAATTCTAA
16._GU_207_/H___
CCAACCCCGGCCGGGGCCAAAATTTTAA
17._GU_265_/P___
CCAACCCCAGCCGGGGCCAAAATTTTAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCAACCAGCTCCACATCCAGAACTAC
1._GU_221_/C___
GGCCAACCAGCTCCACATCCAGAACTAC
2._GU_259_/C___
GGCCAACCGGCTCCCCATCCAAAACCAC
3._GU_249_/H___
GGCCAACCGGCTCCCCATCCAAAACCAC
4._GU_133_/C___
GGCCAACCAGCTCCACATCCAGAACCAC
5._GU_123_/V___
GGCCAACCGGCTCCCCATCCAGAACCAC
6._GU_226_/V___
GGCCAACCAGCTCCCCATCCAAAACCAC
7._GU_296_/H___
GGCCAACCGGCTCCACATCCAAAACTAC
8._GU_114_/P___
GGCCAACCAGCTCCCCATCCAGAACTCC
9._GU_219_/F___
GGCCAGCCAGCTCCCCATCCAGAACTCC
10._GU_171_/C___
GGCCAACCGGCCCCCCAACCAA__CTCC
11._GU_310_/P___
GGCCAACCAACTCCCCATCCAAAACCCC
12._GU_243_/H___
GGCCAACCAGTTCCAATTCCAAAACCAC
13._GU_123_/V___
GGCCAACCGGCCCCCCAACCAGAATTCC
14._GU_125_/C___
GGCCAGCCGGCTCCACATCCAGAACCAA
15._GU_195_/V___
GGCCAACCAGTTCCAATTCCAAAACCAA
16._GU_207_/H___
GGCCAACCAGTTCCCCTTCCAAAACCAC
17._GU_265_/P___
GGCCAACCAACCCCAAAACCAGAACCAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CTAAGGAACCGGGGGGCCAAAATTGGCC
1._GU_221_/C___
CTAAGGAACCGGGGGGCCAAAATTGGCC
2._GU_259_/C___
TTAAGGAACCGGGGGGCCAAAATTGGCC
3._GU_249_/H___
TTAAGGAACCGGGGGGCCAAAATTGGCC
4._GU_133_/C___
CCAAGGAACCGGGGGGCCAAAATTGGCC
5._GU_123_/V___
TTAAGGAACCGGGGGGCCAAAATTGGCC
6._GU_226_/V___
TTAAAGAACCGGGGGGCCAAAATTGGCC
7._GU_296_/H___
CTAAGGAACCGGGGGGCCAAAATTGGCC
8._GU_114_/P___
CTAAGGAACCGGGGGGCCAAAATTGGCC
9._GU_219_/F___
TTAAGGAACCGGGGGGCCAAAATTGGCC
10._GU_171_/C___
CTAAGGAACCGGGGGGCCAAAATTGGCC
11._GU_310_/P___
TTAAGGAACCGGGGGGCCAAAATTGGCC
12._GU_243_/H___
CTAAGGAACCGGGGGGCC__AATTGGCC
13._GU_123_/V___
TT__GGAACCGGGGGGCCAAAATTGGCC
14._GU_125_/C___
CTAAGGAACCGGGGGGCCAAAATTGGCC
15._GU_195_/V___
TTAAGGAACCGGGGGGCCAAAATTGGCC
16._GU_207_/H___
CCAAGGAACCGGGGGGCCAAAATTGGCC
17._GU_265_/P___
CTAAGGAACCGGGGGGCCAAAATTGGCC
 57 58 59            
_Input profile
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._GU_221_/C___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU_259_/C___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_249_/H___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_133_/C___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_123_/V___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_226_/V___
TTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_296_/H___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_114_/P___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_219_/F___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU_171_/C___
TTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._GU_310_/P___
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._GU_243_/H___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._GU_123_/V___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._GU_125_/C___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._GU_195_/V___
TTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._GU_207_/H___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._GU_265_/P___
TTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_221_/C RUQ_200B

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._GU_221_/C RUQ_200

identical
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._GU_259_/C RUQ_203

94.1 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._GU_249_/H RUQ_228B

94 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

4._GU_133_/C RUQ_190

93.2 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

5._GU_123_/V RUQ_187

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

6._GU_226_/V RUQ_1070

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

7._GU_296_/H RUQ_230

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

8._GU_114_/P RUQ_813

92.2 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

9._GU_219_/F RUQ_768

92.2 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

10._GU_171_/C RUQ_195

91.8 %
55 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

11._GU_310_/P RUQ_815

91.4 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

12._GU_243_/H RUQ_814

91.2 %
57 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

13._GU_123_/V RUQ_1068

90.7 %
54 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

14._GU_125_/C RUQ_188

90.7 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

15._GU_195_/V RUQ_1069

90.7 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

16._GU_207_/H RUQ_225

90.7 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

17._GU_265_/P RUQ_890

90.5 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP645 32TcSNP644 33TcSNP642 34TcSNP640 35TcSNP602
36TcSNP591 37TcSNP589 38TcSNP577 39TcSNP546 40TcSNP529
41TcSNP522 42TcSNP519 43TcSNP421 44TcSNP363 45TcSNP329
46TcSNP305 47TcSNP290 48TcSNP230 49TcSNP194 50TcSNP189
51TcSNP176 52TcSNP144 53TcSNP143 54TcSNP131 55TcSNP52
56TcSNP49 57TcSNP33 58TcSNP19 59TcSNP13