SNP Profiles matching GU 144 /C

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTGGGGAATTGGTTTTAAGGCCTTGG
1._GU_249_/H___
AATTGGGGAATTGGTT__AAGGCCTTGG
2._GU_123_/V___
AATTGGGGAATTGGTTTTAAGGCCTTGG
3._GU_221_/C___
AATTGGGGAATTGGTT__AAGTCCTTGG
4._GU_221_/C___
AATTGGGGAATTGGTTTTAAGTCCTTGG
5._GU_310_/P___
AATTGGGGAATTGGTT__AAGGCCTTGG
6._GU_226_/V___
AATTGGGGAATTGGTTTTAATTCCTTGG
7._GU_136_/H___
AATTGGGGAATTGGTT__AAGGCCTTGG
8._GU_123_/V___
AATTGGGGAATTGGTT__AA__CCTTGG
9._GU_133_/C___
AATTCGGGAATTGGTTTTAAGGCCTTGG
10._GU_144_/C___
AATTGGGGAATTGGTTTTAAGGCCCTGG
11._GU_171_/C___
AATTGGGGAA__GGTT__AATTCCTTGG
12._GU_125_/C___
AATTCGGGAATTGGTTTTAAGGCCCTGG
13._GU_195_/V___
AATTGGGGAATTGGTTTTAAGGCCTTGG
14._GU_207_/H___
AATTGGGGAATTGGTTTTAATTCCTTGG
15._GU_296_/H___
AATTCGGGAATTGGTTTTAATTCCTTGG
16._GU_114_/P___
AATTCCGGAGTTGGTT__AAGGCCTTGG
17._GU_322_/P___
AATTCGGGAATTGGTT__AATTCCTTGG
18._GU_147_/H___
AATTCCGGAGTTGGTTTTAAGGCCTTGG
19._GU_341_/H___
AATTCCGGAGTTGGTTTTAAGGCCTTGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAACCCCAACCGGGGCCAAAATTTTAA
1._GU_249_/H___
CCAACCCCAACCGGGGCCAAAATTTTAA
2._GU_123_/V___
CCAACCCCAACCGGGGCCAAAATTCCAA
3._GU_221_/C___
CTAACCCCAACCGGGGCCAAAATTTTAA
4._GU_221_/C___
CTAACCCCAACCGGGGCCAAAATTTTAA
5._GU_310_/P___
CTAACTCCAACCGGGGCTAAAATTCTAA
6._GU_226_/V___
CTAACCCCGGCCGGGGCCAAAATTTTAA
7._GU_136_/H___
CCAATTCCAACCGGGGCCAAAATTTTAA
8._GU_123_/V___
CCAA__CC__CCGGGGCCAAAATTCTAA
9._GU_133_/C___
CCAACCCCGGCCGGGGCCAAAATTTTAA
10._GU_144_/C___
CTAACTCCAACCGGGGCTAAAATTCTAA
11._GU_171_/C___
__AACCCCAACCGGGGCCAAAATTCTAA
12._GU_125_/C___
CCAACCCCAGCCGGGGCTAAAATTTTAA
13._GU_195_/V___
TTAACCCCAACCGGGGCCAAAATTCTAA
14._GU_207_/H___
CCAACCCCGGCCGGGGCCAAAATTTTAA
15._GU_296_/H___
CCAACTCCGGCCGGGGCCAAAATTCTAA
16._GU_114_/P___
CCAACCCCAGCCGGGGCCAAAATTTTAA
17._GU_322_/P___
CCAACTCCGGCCGGGGCCAAAATTCTAA
18._GU_147_/H___
CCAACCCCGGCCGGGGCTAAAATTTTAA
19._GU_341_/H___
CCAACTCCGGCCGGGGCCAAAATTCTAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCCCAACCGGCTCCCCATCCAAAACC
1._GU_249_/H___
GGCCCCAACCGGCTCCCCATCCAAAACC
2._GU_123_/V___
GGCCCCAACCGGCTCCCCATCCAGAACC
3._GU_221_/C___
GGCCCCAACCAGCTCCACATCCAGAACT
4._GU_221_/C___
GGCC__AACCAGCTCCACATCCAGAACT
5._GU_310_/P___
GGCCCCAACCAACTCCCCATCCAAAACC
6._GU_226_/V___
GGCCCCAACCAGCTCCCCATCCAAAACC
7._GU_136_/H___
GGCCCCAACCGGTTCCCCTTCCGGAACC
8._GU_123_/V___
GGCCCCAACCGGCCCCCCAACCAGAATT
9._GU_133_/C___
GGCCCCAACCAGCTCCACATCCAGAACC
10._GU_144_/C___
GGCCCCAGCCGGCTCCCCATCCAAAACC
11._GU_171_/C___
GGCCCCAACCGGCCCCCCAACCAA__CT
12._GU_125_/C___
GGCCCCAGCCGGCTCCACATCCAGAACC
13._GU_195_/V___
GGCCCCAACCAGTTCCAATTCCAAAACC
14._GU_207_/H___
GGCCCCAACCAGTTCCCCTTCCAAAACC
15._GU_296_/H___
GGCCCCAACCGGCTCCACATCCAAAACT
16._GU_114_/P___
GGCCCCAACCAGCTCCCCATCCAGAACT
17._GU_322_/P___
__CCCCAACCAG__CCACAACCAAAACC
18._GU_147_/H___
GGCCCCAACCGGTTCCAATTCCAGAACC
19._GU_341_/H___
GGCCCCAACCGGTTCCCCTTCCAGAACC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACTTAAGGAACCGGGGGGCCAAAATTGG
1._GU_249_/H___
ACTTAAGGAACCGGGGGGCCAAAATTGG
2._GU_123_/V___
ACTTAAGGAACCGGGGGGCCAAAATTGG
3._GU_221_/C___
ACCTAAGGAACCGGGGGGCCAAAATTGG
4._GU_221_/C___
ACCTAAGGAACCGGGGGGCCAAAATTGG
5._GU_310_/P___
CCTTAAGGAACCGGGGGGCCAAAATTGG
6._GU_226_/V___
ACTTAAAGAACCGGGGGGCCAAAATTGG
7._GU_136_/H___
AATTAAGGAACCGGGGGGCCAAAATTGG
8._GU_123_/V___
CCTT__GGAACCGGGGGGCCAAAATTGG
9._GU_133_/C___
ACCCAAGGAACCGGGGGGCCAAAATTGG
10._GU_144_/C___
AACTAAGGAACCGGGGGGCCAAAATTGG
11._GU_171_/C___
CCCTAAGGAACCGGGGGGCCAAAATTGG
12._GU_125_/C___
AACTAAGGAACCGGGGGGCCAAAATTGG
13._GU_195_/V___
AATTAAGGAACCGGGGGGCCAAAATTGG
14._GU_207_/H___
ACCCAAGGAACCGGGGGGCCAAAATTGG
15._GU_296_/H___
ACCTAAGGAACCGGGGGGCCAAAATTGG
16._GU_114_/P___
CCCTAAGGAACCGGGGGGCCAAAATTGG
17._GU_322_/P___
ACTTAAGGAACCGGGGGGCCAAAATTGG
18._GU_147_/H___
AATTAAGGAACCGGGGGGCCAAAATTGG
19._GU_341_/H___
AACTAAGGAACCGGGGGGCCAAAATTGG
 57 58 59 60           
_Input profile
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._GU_249_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU_123_/V___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_221_/C___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_221_/C___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_310_/P___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_226_/V___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_136_/H___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_123_/V___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_133_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU_144_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._GU_171_/C___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._GU_125_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._GU_195_/V___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._GU_207_/H___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._GU_296_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._GU_114_/P___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._GU_322_/P___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
18._GU_147_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
19._GU_341_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_259_/C RUQ_203

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._GU_249_/H RUQ_228B

identical
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._GU_123_/V RUQ_187

96.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._GU_221_/C RUQ_200

94.1 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

4._GU_221_/C RUQ_200B

94.1 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

5._GU_310_/P RUQ_815

94.1 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

6._GU_226_/V RUQ_1070

93.3 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

7._GU_136_/H RUQ_221

93.2 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

8._GU_123_/V RUQ_1068

92.7 %
55 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

9._GU_133_/C RUQ_190

92.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

10._GU_144_/C RUQ_191

92.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

11._GU_171_/C RUQ_195

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

12._GU_125_/C RUQ_188

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

13._GU_195_/V RUQ_1069

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

14._GU_207_/H RUQ_225

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

15._GU_296_/H RUQ_230

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

16._GU_114_/P RUQ_813

91.5 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

17._GU_322_/P RUQ_816

90.4 %
57 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

18._GU_147_/H RUQ_222

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

19._GU_341_/H RUQ_231

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13