SNP Profiles matching GU 296/H

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTCGGGAATTGGTTTTAATTCCTTGG
1._RUQ_816
AATTCGGGAATTGGTT__AATTCCTTGG
2._RUQ_190
AATTCGGGAATTGGTTTTAAGGCCTTGG
3._RUQ_200
AATTGGGGAATTGGTT__AAGTCCTTGG
4._RUQ_200B
AATTGGGGAATTGGTTTTAAGTCCTTGG
5._RUQ_814
AATTGGGGAATTGGTT__AATTCCTTGG
6._RUQ_195
AATTGGGGAA__GGTT__AATTCCTTGG
7._RUQ_1068
AATTGGGGAATTGGTT__AA__CCTTGG
8._RUQ_225
AATTGGGGAATTGGTTTTAATTCCTTGG
9._RUQ_1070
AATTGGGGAATTGGTTTTAATTCCTTGG
10._RUQ_203
AATTGGGGAATTGGTTTTAAGGCCTTGG
11._RUQ_231
AATTCCGGAGTTGGTTTTAAGGCCTTGG
12._RUQ_228B
AATTGGGGAATTGGTT__AAGGCCTTGG
13._RUQ_1543
AATTCGGGAATTGGTT__AAGTCCTTGG
14._RUQ_187
AATTGGGGAATTGGTTTTAAGGCCTTGG
15._RUQ_188
AATTCGGGAATTGGTTTTAAGGCCCTGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAACTCCGGCCGGGGCCAAAATTCTAA
1._RUQ_816
CCAACTCCGGCCGGGGCCAAAATTCTAA
2._RUQ_190
CCAACCCCGGCCGGGGCCAAAATTTTAA
3._RUQ_200
CTAACCCCAACCGGGGCCAAAATTTTAA
4._RUQ_200B
CTAACCCCAACCGGGGCCAAAATTTTAA
5._RUQ_814
CTAACCCCGGCCGGGGCCAAAATTCTAA
6._RUQ_195
__AACCCCAACCGGGGCCAAAATTCTAA
7._RUQ_1068
CCAA__CC__CCGGGGCCAAAATTCTAA
8._RUQ_225
CCAACCCCGGCCGGGGCCAAAATTTTAA
9._RUQ_1070
CTAACCCCGGCCGGGGCCAAAATTTTAA
10._RUQ_203
CCAACCCCAACCGGGGCCAAAATTTTAA
11._RUQ_231
CCAACTCCGGCCGGGGCCAAAATTCTAA
12._RUQ_228B
CCAACCCCAACCGGGGCCAAAATTTTAA
13._RUQ_1543
__AACCCCGGCCGGGGTTAAAATTTTAA
14._RUQ_187
CCAACCCCAACCGGGGCCAAAATTCCAA
15._RUQ_188
CCAACCCCAGCCGGGGCTAAAATTTTAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCCCAACCGGCTCCACATCCAAAACT
1._RUQ_816
__CCCCAACCAG__CCACAACCAAAACC
2._RUQ_190
GGCCCCAACCAGCTCCACATCCAGAACC
3._RUQ_200
GGCCCCAACCAGCTCCACATCCAGAACT
4._RUQ_200B
GGCC__AACCAGCTCCACATCCAGAACT
5._RUQ_814
GGCCCCAACCAGTTCCAATTCCAAAACC
6._RUQ_195
GGCCCCAACCGGCCCCCCAACCAA__CT
7._RUQ_1068
GGCCCCAACCGGCCCCCCAACCAGAATT
8._RUQ_225
GGCCCCAACCAGTTCCCCTTCCAAAACC
9._RUQ_1070
GGCCCCAACCAGCTCCCCATCCAAAACC
10._RUQ_203
GGCCCCAACCGGCTCCCCATCCAAAACC
11._RUQ_231
GGCCCCAACCGGTTCCCCTTCCAGAACC
12._RUQ_228B
GGCCCCAACCGGCTCCCCATCCAAAACC
13._RUQ_1543
GGCCCCAACCGGCC__ACAACCAAAACC
14._RUQ_187
GGCCCCAACCGGCTCCCCATCCAGAACC
15._RUQ_188
GGCCCCAGCCGGCTCCACATCCAGAACC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACCTAAGGAACCGGGGGGCCAAAATTGG
1._RUQ_816
ACTTAAGGAACCGGGGGGCCAAAATTGG
2._RUQ_190
ACCCAAGGAACCGGGGGGCCAAAATTGG
3._RUQ_200
ACCTAAGGAACCGGGGGGCCAAAATTGG
4._RUQ_200B
ACCTAAGGAACCGGGGGGCCAAAATTGG
5._RUQ_814
ACCTAAGGAACCGGGGGGCC__AATTGG
6._RUQ_195
CCCTAAGGAACCGGGGGGCCAAAATTGG
7._RUQ_1068
CCTT__GGAACCGGGGGGCCAAAATTGG
8._RUQ_225
ACCCAAGGAACCGGGGGGCCAAAATTGG
9._RUQ_1070
ACTTAAAGAACCGGGGGGCCAAAATTGG
10._RUQ_203
ACTTAAGGAACCGGGGGGCCAAAATTGG
11._RUQ_231
AACTAAGGAACCGGGGGGCCAAAATTGG
12._RUQ_228B
ACTTAAGGAACCGGGGGGCCAAAATTGG
13._RUQ_1543
CCCTAAAGAACCGGGGGGCCAAAATTGG
14._RUQ_187
ACTTAAGGAACCGGGGGGCCAAAATTGG
15._RUQ_188
AACTAAGGAACCGGGGGGCCAAAATTGG
 57 58 59 60           
_Input profile
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_816
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_190
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_200
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._RUQ_200B
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._RUQ_814
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._RUQ_195
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._RUQ_1068
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._RUQ_225
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_1070
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._RUQ_203
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._RUQ_231
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._RUQ_228B
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._RUQ_1543
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._RUQ_187
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._RUQ_188
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_296_/H RUQ_230

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._GU_322_/P RUQ_816

95.6 %
57 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._GU_133_/C RUQ_190

92.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._GU_221_/C RUQ_200

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

4._GU_221_/C RUQ_200B

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

5._GU_243_/H RUQ_814

92.2 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

6._GU_171_/C RUQ_195

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

7._GU_123_/V RUQ_1068

91.8 %
55 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

8._GU_207_/H RUQ_225

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

9._GU_226_/V RUQ_1070

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

10._GU_259_/C RUQ_203

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

11._GU_341_/H RUQ_231

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

12._GU_249_/H RUQ_228B

91.5 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

13._GU_183_/G RUQ_1543

90.4 %
57 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

14._GU_123_/V RUQ_187

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

15._GU_125_/C RUQ_188

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13