SNP Profiles matching GU 322 /P

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	CG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
1._RUQ_230	AA	TT	CG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
2._RUQ_1070	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CT
3._RUQ_814	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CT
4._RUQ_228	AA	TT	CG	GG	AA	TT	GG	TT	AA	GT	CC	TT	GG	CT
5._RUQ_1543	AA	TT	CG	GG	AA	TT	GG	TT	AA	GT	CC	TT	GG	__
6._RUQ_195	AA	TT	GG	GG	AA	__	GG	TT	AA	TT	CC	TT	GG	__
7._RUQ_1068	AA	TT	GG	GG	AA	TT	GG	TT	AA	__	CC	TT	GG	CC
8._RUQ_190	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
9._RUQ_225	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
10._RUQ_223	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	TT
11._RUQ_228B	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
12._RUQ_203	AA	TT	GG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
1._RUQ_230	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
2._RUQ_1070	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	CC
3._RUQ_814	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
4._RUQ_228	AA	CT	CC	AG	CC	GG	GG	CT	AA	AA	TT	TT	AA	CC
5._RUQ_1543	AA	CC	CC	GG	CC	GG	GG	TT	AA	AA	TT	TT	AA	CC
6._RUQ_195	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
7._RUQ_1068	AA	__	CC	__	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
8._RUQ_190	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	CC
9._RUQ_225	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	CC
10._RUQ_223	AA	TT	CC	AG	CC	GG	GG	CC	AA	AA	TT	CT	AA	CC
11._RUQ_228B	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	CC
12._RUQ_203	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	AA	CC	AG	CC	AC	AA	CC	AA	AA	CC	AC	TT	AA
1._RUQ_230	CC	AA	CC	GG	CC	AC	AT	CC	AA	AA	CT	AC	CT	AA
2._RUQ_1070	CC	AA	CC	AG	CC	CC	AT	CC	AA	AA	CC	AC	TT	AA
3._RUQ_814	CC	AA	CC	AG	CC	AA	TT	CC	AA	AA	CC	AC	CT	AA
4._RUQ_228	CC	AA	CC	AG	CC	AA	AA	CC	AA	AA	CC	CC	TT	AA
5._RUQ_1543	CC	AA	CC	GG	__	AC	AA	CC	AA	AA	CC	CC	CT	AA
6._RUQ_195	CC	AA	CC	GG	CC	CC	AA	CC	AA	__	CT	CC	CT	AA
7._RUQ_1068	CC	AA	CC	GG	CC	CC	AA	CC	AG	AA	TT	CC	TT	__
8._RUQ_190	CC	AA	CC	AG	CC	AC	AT	CC	AG	AA	CC	AC	CC	AA
9._RUQ_225	CC	AA	CC	AG	CC	CC	TT	CC	AA	AA	CC	AC	CC	AA
10._RUQ_223	CC	AA	CC	GG	CC	CC	TT	CC	AG	AA	CC	CC	TT	AA
11._RUQ_228B	CC	AA	CC	GG	CC	CC	AT	CC	AA	AA	CC	AC	TT	AA
12._RUQ_203	CC	AA	CC	GG	CC	CC	AT	CC	AA	AA	CC	AC	TT	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AA
1._RUQ_230	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AC
2._RUQ_1070	AG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AA
3._RUQ_814	GG	AA	CC	GG	GG	GG	CC	__	AA	TT	GG	CC	TT	CC
4._RUQ_228	GG	AA	CC	GG	GG	__	CC	AC	AA	TT	GG	CC	TT	AC
5._RUQ_1543	AG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AA
6._RUQ_195	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AA
7._RUQ_1068	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	CC
8._RUQ_190	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	CC
9._RUQ_225	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	CC
10._RUQ_223	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AA
11._RUQ_228B	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AC
12._RUQ_203	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	AC

	57
_Input profile	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_230	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1070	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_814	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._RUQ_228	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._RUQ_1543	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._RUQ_195	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._RUQ_1068	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._RUQ_190	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._RUQ_225	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._RUQ_223	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_228B	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_203	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GU_322_/P RUQ_816

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

1._GU_296_/H RUQ_230

95.6 %
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.993

2._GU_226_/V RUQ_1070

93.9 %
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

3._GU_243_/H RUQ_814

92 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

4._GU_249_/H RUQ_228

92 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.996

5._GU_183_/G RUQ_1543

91.8 %
55 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

6._GU_171_/C RUQ_195

91.7 %
54 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.996

7._GU_123_/V RUQ_1068

91.5 %
53 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

8._GU_133_/C RUQ_190

91.2 %
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

9._GU_207_/H RUQ_225

91.2 %
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

10._GU_168_/H RUQ_223

90.4 %
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

11._GU_249_/H RUQ_228B

90.4 %
57 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

12._GU_259_/C RUQ_203

90.4 %
57 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP702	29	TcSNP660	30	TcSNP645
31	TcSNP644	32	TcSNP642	33	TcSNP602	34	TcSNP591	35	TcSNP589
36	TcSNP577	37	TcSNP546	38	TcSNP529	39	TcSNP522	40	TcSNP519
41	TcSNP421	42	TcSNP363	43	TcSNP329	44	TcSNP305	45	TcSNP290
46	TcSNP230	47	TcSNP194	48	TcSNP189	49	TcSNP176	50	TcSNP144
51	TcSNP143	52	TcSNP131	53	TcSNP52	54	TcSNP49	55	TcSNP33
56	TcSNP19	57	TcSNP13