SNP Profiles matching GU 136 /H

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCACGGCCAAGGGGCCAAGGGGAAGGAA
1._GU_133_/C___
CCACGGCCAAGGGGCCAAGGGGAAGGAA
2._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
3._GU_125_/C___
CCACAACCAAGGGGCCAAGGGGAAGGAA
4._GU_261_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
5._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
6._GU_151___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
7._GU_154_/C___
CCACAACCAAGGGGCCAAGGGGAAGGAA
8._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
9._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
10._GU_296_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
11._GU_147_/H___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
12._GU_277_/G___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
13._GU_136_/H___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
14._GU_263_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
15._GU_125_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
16._GU_168_/H___
CCCCAACCAAGGGGCCAAGGGGAAGGAA
17._GU_241___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
18._GU_114_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
19._GU_241_/P___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
20._GU_241_/P___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
21._GU_249_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
22._GU_310___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
23._GU_335___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
24._CRU_156___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
25._GU_310_/P___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
26._GU_156_B___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
27._GU_185_/G___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
28._GU_185___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
29._GU_156_B___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
30._GU_114___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
31._GU_183_/G___
CCACGGCCAAGGGGCCAAGGGGAAGGAA
32._GU_175___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
33._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
34._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
35._GU_147_/H___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
36._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
37._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
38._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
39._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
40._GU_219_/F___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
41._GU_243_/H___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
42._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
43._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
44._GU_353___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
45._GU_221_/C___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
46._GU_221_/C___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
47._GU_255_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
48._GU_123_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
49._GU_255_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
50._GU_123_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
51._GU_195_/V___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
52._GU_123_/C___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
53._GU_221_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
54._GU_221_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAAAAACCGGAAGGAAGGCGGGAAAA
1._GU_133_/C___
AAAAAAAA__GGAAGGAAGGCGGGAAAA
2._GU_261___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
3._GU_125_/C___
AAAAAAAACCGGAAGGAAGGCGGGAAAA
4._GU_261_/P___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
5._GU_261___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
6._GU_151___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
7._GU_154_/C___
AAAAAAAA__GGAAGGAAGGCGGGAAAA
8._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
9._GU_261___
AAAAAAAAACGGAAGGAAGGGGGGAAAA
10._GU_296_/H___
AAAAAAAG__GGAAGGAAGGCGGGAAAA
11._GU_147_/H___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
12._GU_277_/G___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
13._GU_136_/H___
AAAAAAAAACGGAAGGAAGGCCGGAAAA
14._GU_263_/V___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
15._GU_125_/C___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
16._GU_168_/H___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
17._GU_241___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
18._GU_114_/P___
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
19._GU_241_/P___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
20._GU_241_/P___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
21._GU_249_/H___
AAAAAAAA__GGAAGGACGGCGGGAAAA
22._GU_310___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
23._GU_335___
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
24._CRU_156___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
25._GU_310_/P___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
26._GU_156_B___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
27._GU_185_/G___
AAAAAAAACCGGAAGGACGGGGGGAAAA
28._GU_185___
AAAAAAAACCGGAAGGACGGGGGGAAAA
29._GU_156_B___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
30._GU_114___
AAAAAAAGACGGAAGGAAGGGGGGAAAA
31._GU_183_/G___
AAAAAAAG__GGAAGGAAGGCGGGAAAA
32._GU_175___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
33._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
34._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
35._GU_147_/H___
AAAAAAAACCGGAAGGAAGGCCAGAAAA
36._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
37._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
38._GU_144_/C___
AAAAAAAG__GGAAGGAAGGCCGGAAAA
39._GU_171_/C___
AAAAAAAACCGGAAGGAAGGCCAAAAAA
40._GU_219_/F___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
41._GU_243_/H___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
42._GU_171_/C___
AAAAAAAACCGGAAGGAAGGCCAAAAAA
43._GU_171_/C___
AAAAAAAA__GGAAGGAAGGCCAAAAAA
44._GU_353___
AAAAAAGGACGGAAGGAAGGCCGGAAAA
45._GU_221_/C___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
46._GU_221_/C___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
47._GU_255_/V___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
48._GU_123_/V___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
49._GU_255_/P___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
50._GU_123_/V___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
51._GU_195_/V___
AAAAAAGG__GGAAGGAAGGCCGGAAAA
52._GU_123_/C___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
53._GU_221_/H___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
54._GU_221_/H___
AAAAAAAG__GGAAGGAAGGCCAGAAAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGTTGGAAGGGGGGGGGGCCTTATGGGG
1._GU_133_/C___
GGTTGGAAGGGGGGGGGG__TTATGGGG
2._GU_261___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
3._GU_125_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
4._GU_261_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._GU_261___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
6._GU_151___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
7._GU_154_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
8._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
9._GU_261___
GGTTGGAAGGGGGGGGGG__TTAAGGGG
10._GU_296_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
11._GU_147_/H___
GGTTGGAAGGGGGGGGGG__TTATGGGG
12._GU_277_/G___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
13._GU_136_/H___
GGTTGGAAGGGGGGGGGG__TTATGGGG
14._GU_263_/V___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._GU_125_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
16._GU_168_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
17._GU_241___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
18._GU_114_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
19._GU_241_/P___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
20._GU_241_/P___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
21._GU_249_/H___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
22._GU_310___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._GU_335___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
24._CRU_156___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
25._GU_310_/P___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
26._GU_156_B___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
27._GU_185_/G___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
28._GU_185___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
29._GU_156_B___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
30._GU_114___
GGTTGGAAGGGGGGGGGG__TTAAGGGG
31._GU_183_/G___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
32._GU_175___
GGTTGGAAGGGGGGGGGG__TTTTGGGG
33._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._GU_147_/H___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
36._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
38._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
39._GU_171_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
40._GU_219_/F___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
41._GU_243_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
42._GU_171_/C___
GGTTGGAAGGGGGGGGGG__TTTTGGGG
43._GU_171_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
44._GU_353___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
45._GU_221_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
46._GU_221_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
47._GU_255_/V___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
48._GU_123_/V___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
49._GU_255_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
50._GU_123_/V___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
51._GU_195_/V___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
52._GU_123_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
53._GU_221_/H___
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
54._GU_221_/H___
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCGGCC
1._GU_133_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
2._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
3._GU_125_/C___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
4._GU_261_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
5._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
6._GU_151___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
7._GU_154_/C___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
8._GU_144_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
10._GU_296_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
11._GU_147_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
12._GU_277_/G___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
13._GU_136_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
14._GU_263_/V___
AAAAGGGGGGTTGGAACCAAGGCCAGCC
15._GU_125_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
16._GU_168_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
17._GU_241___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
18._GU_114_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._GU_241_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._GU_241_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
21._GU_249_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
22._GU_310___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._GU_335___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._CRU_156___
AAAAGGGGGGTTGGAACCAAGGCCAGCC
25._GU_310_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._GU_156_B___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
27._GU_185_/G___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
28._GU_185___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
29._GU_156_B___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
30._GU_114___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._GU_183_/G___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
32._GU_175___
AAAAGGGGGGTTGGAACCAAGGCCAGCC
33._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
34._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
35._GU_147_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
37._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
38._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
39._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._GU_219_/F___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
41._GU_243_/H___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
42._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._GU_353___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._GU_221_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._GU_221_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._GU_255_/V___
AAGGGGGGGGTTGGAACCAAGGCCAACC
48._GU_123_/V___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
49._GU_255_/P___
AAGGGGGGGGTTGGAACCAAGGCCAACC
50._GU_123_/V___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
51._GU_195_/V___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
52._GU_123_/C___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
53._GU_221_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
54._GU_221_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
ACGGGGGGGGAACCAAAACCAAAAAACC
1._GU_133_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
2._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
3._GU_125_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
4._GU_261_/P___
ACGGGGGGAGAACCAAAACCAAAAAACC
5._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
6._GU_151___
CCGGGGGGGGAACCAAAACCAAAAAACC
7._GU_154_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
8._GU_144_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
9._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
10._GU_296_/H___
ACGGGGGGGGAACCAAAACCAAAAAACC
11._GU_147_/H___
AAGGGGAGGGAACCAAAACCAAAAAACC
12._GU_277_/G___
ACGGGGGGAAAACCAAAACCAAAAAACC
13._GU_136_/H___
CCGGGGGGGGAACCAAAACCAAAAAACC
14._GU_263_/V___
CCGGGGAGAAAACCAAAACCAAAAAACC
15._GU_125_/C___
CCGGGGGGAAAACCAAAACCAAAAAACC
16._GU_168_/H___
CCGGGGGGAGAACCAAAACCAAAAAACC
17._GU_241___
ACGGGGGGAGAACCAAAAACAAAAAACC
18._GU_114_/P___
CCGGGGAGAGAACCAAAACCAAAAAACC
19._GU_241_/P___
ACGGGGGGAGAACCAAAAACAAAAAACC
20._GU_241_/P___
ACGGGGGGAGAACCAAAAACAAAAAACC
21._GU_249_/H___
AAGGGGGGAAAACCAAAACCAAAAAACC
22._GU_310___
CCGGGGGGGGAACCAAAAAAAAAAAACC
23._GU_335___
CCGGGGGGAGAACCAAAAACAAAAAACC
24._CRU_156___
CCGGGGGGAAAACCAAAACCAAAAAACC
25._GU_310_/P___
CCGGGGGGGGAACCAAAAAAAAAAAACC
26._GU_156_B___
CCGGGGGGAAAACCAAAACCAAAAAACC
27._GU_185_/G___
ACGGGGAGAAAACCAAAACCAAAAAACC
28._GU_185___
ACGGGGAGAAAACCAAAACCAAAAAACC
29._GU_156_B___
CCGGGGGGAAAACCAAAACCAAAAAACC
30._GU_114___
CCGGGGAGAGAACCAAAACCAAAAAACC
31._GU_183_/G___
AAGGGGAGAAAACCAAAAACAAAAAACC
32._GU_175___
CCGGGGGGAAAACCAAAACCAAAAAACC
33._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
34._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
35._GU_147_/H___
CCGGGGGGAGAACCAAAAACAAAAAACC
36._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
37._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
38._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
39._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
40._GU_219_/F___
CCGGGGAGAGAACCAAAACCAAAAAACC
41._GU_243_/H___
AAGGGGGGGGAACCAAAAACAAAAAACC
42._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
43._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
44._GU_353___
ACGGGGGGAGAACCAAAAACAAAAAACC
45._GU_221_/C___
ACGGGGGGAGAACCAAAAAAAAAAAACC
46._GU_221_/C___
ACGGGGGGAGAACCAAAAAAAAAAAACC
47._GU_255_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
48._GU_123_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
49._GU_255_/P___
CCGGGGAAAAAACCAAAACCAAAAAACC
50._GU_123_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
51._GU_195_/V___
AAGGGGGGAAAACCAAAAACAAAAAACC
52._GU_123_/C___
CCGGGGAAAAAACCAAAACCAAAAAACC
53._GU_221_/H___
CCGGGGGGAGAACCAAAAAAAAAAAACC
54._GU_221_/H___
CCGGGGGGAGAACCAAAAAAAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
1._GU_133_/C___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
2._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
3._GU_125_/C___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
4._GU_261_/P___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
5._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
6._GU_151___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
7._GU_154_/C___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
8._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
9._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
10._GU_296_/H___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
11._GU_147_/H___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
12._GU_277_/G___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
13._GU_136_/H___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
14._GU_263_/V___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
15._GU_125_/C___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
16._GU_168_/H___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
17._GU_241___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
18._GU_114_/P___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
19._GU_241_/P___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
20._GU_241_/P___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
21._GU_249_/H___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
22._GU_310___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
23._GU_335___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
24._CRU_156___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
25._GU_310_/P___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
26._GU_156_B___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
27._GU_185_/G___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
28._GU_185___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
29._GU_156_B___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
30._GU_114___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
31._GU_183_/G___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
32._GU_175___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
33._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
34._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
35._GU_147_/H___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
36._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
37._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
38._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
39._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
40._GU_219_/F___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
41._GU_243_/H___
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
42._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
43._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
44._GU_353___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
45._GU_221_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
46._GU_221_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
47._GU_255_/V___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
48._GU_123_/V___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
49._GU_255_/P___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
50._GU_123_/V___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
51._GU_195_/V___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
52._GU_123_/C___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
53._GU_221_/H___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._GU_221_/H___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X

Input profile: GU_133_/C MITC-000670

 
USDA-SHRS, United States of America
 Mars, 2018

1._GU_133_/C GC-01-116-6-13

identical
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_261 GC-01-72-4-8

97.6 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

3._GU_125_/C RUQ_188

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._GU_261_/P RUQ_1370

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

5._GU_261 MITC-000581

97.6 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

6._GU_151 GC-08-172-4-15

97.5 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

7._GU_154_/C GC-01-78-4-14

97.5 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._GU_144_/C GC-01-73-4-9

97 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

9._GU_261 GC-01-72-4-8

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

10._GU_296_/H GC-01-76-4-12

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._GU_147_/H GC-01-80-4-16

96.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._GU_277_/G RUQ_771

96.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

13._GU_136_/H GC-03-19-2-8

96.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

14._GU_263_/V RUQ_1545

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_125_/C GC-01-138-7-17

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._GU_168_/H GC-03-23-2-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_241 GC-08-266-8-38

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_114_/P RUQ_813

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._GU_241_/P RUQ_1431

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._GU_241_/P MITC-000612

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

21._GU_249_/H RUQ_228

95.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_310 GC-08-268-8-40

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._GU_335 GC-08-052-1-63

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._CRU_156 RUQ_880

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

25._GU_310_/P RUQ_815

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._GU_156_B MITC-000403

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

27._GU_185_/G MITC-000047

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

28._GU_185 GU_185_Fld#_200_Plt#_1

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

29._GU_156_B GU-156B_Fld#_198_Plt#_2

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

30._GU_114 GC-08-170-4-13

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._GU_183_/G RUQ_1543

94.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._GU_175 GC-01-100-5-17

94.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

33._GU_144_/C GC-01-73-4-9

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

34._GU_144_/C RUQ_191

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

35._GU_147_/H RUQ_222

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._GU_144_/C MITC-000615

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

37._GU_144_/C MITC-000578

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

38._GU_144_/C GC-01-73-4-9

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

39._GU_171_/C RUQ_195

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

40._GU_219_/F RUQ_768

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_243_/H RUQ_814

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

42._GU_171_/C GC-01-94-5-11

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

43._GU_171_/C GC-01-94-5-11

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

44._GU_353 GC-04-23-2-5

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

45._GU_221_/C GC-01-75-4-11

92.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

46._GU_221_/C RUQ_200

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

47._GU_255_/V RUQ_1549

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

48._GU_123_/V MITC-000597

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

49._GU_255_/P MITC-000379

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

50._GU_123_/V RUQ_1068

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_195_/V RUQ_1069

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_123_/C GC-01-95-5-12

91.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_221_/H GU_221_H_Fld#_162_Plt#_1

90.2 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

54._GU_221_/H GC-01-74-4-10

90.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998