SNP Profiles matching LCT_EEN_46

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGGGAAAACC
1._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
2._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
10._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
11._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
12._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
16._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
17._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
18._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
19._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
20._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
21._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
23._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
24._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
25._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
26._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
27._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
29._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
30._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
31._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
32._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
35._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
36._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
37._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
38._CAS_1_Fld#_54_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAAAA
39._RUQ_1719
CCAAAGAAAAGGAACCAAGGAAAAAAAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAGGAAAAGGAAAACCGGCCAAAAGG
1._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
2._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
11._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
14._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
15._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
16._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
17._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
18._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
19._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
20._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
23._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
24._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
25._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
26._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
27._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
29._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
30._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
31._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
32._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
33._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
35._RUQ_683
AAAAGGAAAAGGAAAACCGGCCAAAAGG
36._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
37._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
38._CAS_1_Fld#_54_Plt#_6
AAAAGGAAAAGGAAAGCCGGCCAAACGG
39._RUQ_1719
AAAAGGAAACGGAAAGCCGGCCAAAAAG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
2._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
9._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._RUQ_1159
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
19._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
24._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
27._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
31._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
32._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
33._RUQ_557
AATTGGAAGGAAGGGGGGCCTTTTGGGG
34._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
35._RUQ_683
AATTAGAAGGAAGGGGGGCCTTTTGGGG
36._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
37._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
38._CAS_1_Fld#_54_Plt#_6
AATTGGAAGGAAGGGGGGCCTTAAGGGG
39._RUQ_1719
AATTGGAAGGAAGGGGGGCCTTATGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAACC
1._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
10._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
14._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
15._RUQ_1159
AAAAGGGGGGATGGAACCCCGGAAAACC
16._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
17._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
18._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
20._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
21._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
22._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
23._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
24._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
25._NACIONAL_Fld#_189_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
26._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
27._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
29._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
30._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
31._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
32._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
33._RUQ_557
AAAAGGGGGGAAGGAACCCCGGAAAAGG
34._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
35._RUQ_683
AAAAGGGGGGTTGGAACCCCGGAAAAGG
36._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
37._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
38._CAS_1_Fld#_54_Plt#_6
AAAAGGGGGGATGGAACCCCGGAAAAGG
39._RUQ_1719
AAAAGGGGGGATGGAACCCCAGAAAACG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
2._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
12._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
13._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
14._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
15._RUQ_1159
ACGGAAAAGGAACCGGAGAAAAAAAACC
16._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
17._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
19._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
23._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
24._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
25._NACIONAL_Fld#_189_Plt#_5
AAGGGGAAGGAACCGGAAAAAAAACCCC
26._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
27._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
29._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
30._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
31._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
32._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
33._RUQ_557
AAGGGGAAGGAACCGGAAAAAAAAAACC
34._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
35._RUQ_683
AAAGGGAAGGAACCGGAAAAAAAACCCC
36._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
37._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
38._CAS_1_Fld#_54_Plt#_6
AAGGAGAAGGAACCGGAAAAAAAAAACC
39._RUQ_1719
AAGGAGAAAGAACCGGAAAAAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._RUQ_1159
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
16._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
18._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
19._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
21._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
22._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
24._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._NACIONAL_Fld#_189_Plt#_5
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
26._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
27._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
30._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
31._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
32._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._RUQ_557
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
34._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
35._RUQ_683
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X
36._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
37._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
38._CAS_1_Fld#_54_Plt#_6
GGCGGGGGGGCCGGGGGGAAAAGGX_XX_X
39._RUQ_1719
GGCCGGGGAGCCAAGGGGAAAAGGX_XX_X

Input profile: LCT_EEN_46 MITC-000412

 
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USDA-SHRS, United States of America
 Mars, 2018

1._BE_10 GC-08-90-2-13

identical
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

2._B_12_/2_[POU] RUQ_436

identical
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._SC_9_[UNK] RUQ_44

identical
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._AMELONADO_[VAR] MITC-000366

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

5._UF_273 MITC-000717

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

6._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

identical
82 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

7._SIAL_42 SIAL_42_Fld#_146_Plt#_6

identical
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

8._GU_207 GC-01-56-3-11

identical
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._SIAL_70 GC-01-39-2-16

97.6 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._SIAL_88 GC-01-52-3-7

97 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._MATINA_1_/6 RUQ_1715

96.3 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

12._MATINA_1_/6 MITC-000114

96.3 %
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

13._CC_37 CC_37_Fld#_69B_Plt#_4

96.3 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

14._SIC_7 SIC_7_Fld#_68_Plt#_6

96.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._N_38_[T38] RUQ_1159

95.1 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

16._SIAL_98 SIAL_98_Fld#_84_Plt#_5

95.1 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

17._JA_9_/37_[POU] GC-08-71-1-93

95.1 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._SIC_628 GC-06-15-1-15

95.1 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._SIAL_44 SIAL_44_Fld#_66_Plt#_5

94.5 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

20._FSC_13 RUQ_1535

93.9 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GDL_3 RUQ_553

93.9 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._SIC_1 SIC_1_Fld#_51_Plt#_5

93.9 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._BE_8 RUQ_1694

93.3 %
82 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._EEG_8 RUQ_1726

93.3 %
82 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

25._NACIONAL NACIONAL_Fld#_189_Plt#_5

93.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

26._SIC_2 SIC_2_Fld#_120_Plt#_6

93.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

27._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

92.7 %
82 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

28._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

92.7 %
82 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

29._EEG_27 GC-08-254-8-22

92.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._SIAL_169 GC-01-41-2-18

92.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._SIAL_505 GC-01-48-3-3

92.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_300 GC-08-63-1-85

92.1 %
82 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

33._MAR_9 RUQ_557

92.1 %
82 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._POUND_5_/C GC-01-118-6-15

91.5 %
82 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

35._GS_13 RUQ_683

91.5 %
82 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._CATONGO_1 GC-08-109-3-8

91.4 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

37._CATONGO_1 GC-08-277-8-49

91.4 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

38._CAS_1 CAS_1_Fld#_54_Plt#_6

90.9 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 54, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

39._BE_5 RUQ_1719

90.2 %
82 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998