SNP Profiles matching CRU 156 (MIS_TTOICGT_GU 175/P)

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCACAGCCAAGGGGCCAAGGGGAAGGAA
1._GU_175___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
2._GU_156_B___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
3._GU_156_B___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
4._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
5._GU_123_/C___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
6._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
7._GU_277_/G___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
8._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
9._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
10._GU_136_/H___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
11._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
12._GU_310___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
13._GU_219_/F___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
14._GU_263_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
15._GU_310_/P___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
16._GU_123_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
17._GU_125_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
18._GU_168_/H___
CCCCAACCAAGGGGCCAAGGGGAAGGAA
19._GU_123_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
20._GU_241___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
21._GU_125_/C___
CCACAACCAAGGGGCCAAGGGGAAGGAA
22._GU_147_/H___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
23._GU_241_/P___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
24._GU_133_/C___
CCACGGCCAAGGGGCCAAGGGGAAGGAA
25._GU_241_/P___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
26._GU_151___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
27._GU_154_/C___
CCACAACCAAGGGGCCAAGGGGAAGGAA
28._GU_249_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
29._GU_133_/C___
CCACGGCCAAGGGGCCAAGGGGAAGGAA
30._GU_144_/C___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
31._GU_335___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
32._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
33._GU_255_/V___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
34._GU_185_/G___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
35._GU_255_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
36._GU_185___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
37._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
38._GU_171_/C___
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
39._GU_296_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
40._GU_195_/V___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
41._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
42._GU_353___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
43._GU_114_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
44._GU_261_/P___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
45._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
46._GU_221_/C___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
47._GU_221_/C___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
48._GU_243_/H___
CCACAGCCAAGGGGCCAAGGGGAAGGAA
49._GU_261___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
50._GU_114___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
51._GU_221_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
52._GU_221_/H___
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
53._GU_183_/G___
CCACGGCCAAGGGGCCAAGGGGAAGGAA
54._KER_3___
CCAAAACCAAGGGGCCAAGGGGAAGGAA
55._GU_147_/H___
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAAAAACCGGAAGGAAGGCCGGAAAA
1._GU_175___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
2._GU_156_B___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
3._GU_156_B___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
4._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
5._GU_123_/C___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
6._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
7._GU_277_/G___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
8._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
9._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
10._GU_136_/H___
AAAAAAAAACGGAAGGAAGGCCGGAAAA
11._GU_144_/C___
AAAAAAAG__GGAAGGAAGGCCGGAAAA
12._GU_310___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
13._GU_219_/F___
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
14._GU_263_/V___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
15._GU_310_/P___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
16._GU_123_/V___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
17._GU_125_/C___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
18._GU_168_/H___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
19._GU_123_/V___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
20._GU_241___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
21._GU_125_/C___
AAAAAAAACCGGAAGGAAGGCGGGAAAA
22._GU_147_/H___
AAAAAAAACCGGAAGGAAGGCCAGAAAA
23._GU_241_/P___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
24._GU_133_/C___
AAAAAAAACCGGAAGGAAGGCGGGAAAA
25._GU_241_/P___
AAAAAAAACCGGAAGGAAGGCGAGAAAA
26._GU_151___
AAAAAAAA__GGAAGGAAGGCCGGAAAA
27._GU_154_/C___
AAAAAAAA__GGAAGGAAGGCGGGAAAA
28._GU_249_/H___
AAAAAAAA__GGAAGGACGGCGGGAAAA
29._GU_133_/C___
AAAAAAAA__GGAAGGAAGGCGGGAAAA
30._GU_144_/C___
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
31._GU_335___
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
32._GU_171_/C___
AAAAAAAACCGGAAGGAAGGCCAAAAAA
33._GU_255_/V___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
34._GU_185_/G___
AAAAAAAACCGGAAGGACGGGGGGAAAA
35._GU_255_/P___
AAAAAAAACCGGAAGGAAGGCCGGAAAA
36._GU_185___
AAAAAAAACCGGAAGGACGGGGGGAAAA
37._GU_171_/C___
AAAAAAAACCGGAAGGAAGGCCAAAAAA
38._GU_171_/C___
AAAAAAAA__GGAAGGAAGGCCAAAAAA
39._GU_296_/H___
AAAAAAAG__GGAAGGAAGGCGGGAAAA
40._GU_195_/V___
AAAAAAGG__GGAAGGAAGGCCGGAAAA
41._GU_261___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
42._GU_353___
AAAAAAGGACGGAAGGAAGGCCGGAAAA
43._GU_114_/P___
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
44._GU_261_/P___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
45._GU_261___
AAAAAAAACCGGAAGGAAGGGGGGAAAA
46._GU_221_/C___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
47._GU_221_/C___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
48._GU_243_/H___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
49._GU_261___
AAAAAAAAACGGAAGGAAGGGGGGAAAA
50._GU_114___
AAAAAAAGACGGAAGGAAGGGGGGAAAA
51._GU_221_/H___
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
52._GU_221_/H___
AAAAAAAG__GGAAGGAAGGCCAGAAAA
53._GU_183_/G___
AAAAAAAG__GGAAGGAAGGCGGGAAAA
54._KER_3___
AAAAAAGG__GGAAGGCCGGCCGGAAAA
55._GU_147_/H___
AAAAAAAA__GGAAGGAAGGGGGGAAAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
1._GU_175___
GGTTGGAAGGGGGGGGGG__TTTTGGGG
2._GU_156_B___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
3._GU_156_B___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
4._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._GU_123_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
6._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
7._GU_277_/G___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
8._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
9._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
10._GU_136_/H___
GGTTGGAAGGGGGGGGGG__TTATGGGG
11._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
12._GU_310___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
13._GU_219_/F___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
14._GU_263_/V___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._GU_310_/P___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
16._GU_123_/V___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
17._GU_125_/C___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
18._GU_168_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
19._GU_123_/V___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
20._GU_241___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
21._GU_125_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
22._GU_147_/H___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._GU_241_/P___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
24._GU_133_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
25._GU_241_/P___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
26._GU_151___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
27._GU_154_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
28._GU_249_/H___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
29._GU_133_/C___
GGTTGGAAGGGGGGGGGG__TTATGGGG
30._GU_144_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
31._GU_335___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
32._GU_171_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
33._GU_255_/V___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._GU_185_/G___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._GU_255_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
36._GU_185___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._GU_171_/C___
GGTTGGAAGGGGGGGGGG__TTTTGGGG
38._GU_171_/C___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
39._GU_296_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
40._GU_195_/V___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
41._GU_261___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
42._GU_353___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
43._GU_114_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
44._GU_261_/P___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
45._GU_261___
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
46._GU_221_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
47._GU_221_/C___
GGTTGGAAGGGGGGGGGGCCTTATGGGG
48._GU_243_/H___
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
49._GU_261___
GGTTGGAAGGGGGGGGGG__TTAAGGGG
50._GU_114___
GGTTGGAAGGGGGGGGGG__TTAAGGGG
51._GU_221_/H___
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
52._GU_221_/H___
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
53._GU_183_/G___
GGTTGGAAGGGGGGGGGGCCTTATAGGG
54._KER_3___
GGTTGGAAGGGGGGGGGGCCTTTTAAGG
55._GU_147_/H___
GGTTGGAAGGGGGGGGGG__TTATGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCAGCC
1._GU_175___
AAAAGGGGGGTTGGAACCAAGGCCAGCC
2._GU_156_B___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
3._GU_156_B___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
4._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
5._GU_123_/C___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
6._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
7._GU_277_/G___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
8._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
9._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
10._GU_136_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
11._GU_144_/C___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
12._GU_310___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
13._GU_219_/F___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
14._GU_263_/V___
AAAAGGGGGGTTGGAACCAAGGCCAGCC
15._GU_310_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
16._GU_123_/V___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
17._GU_125_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
18._GU_168_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._GU_123_/V___
AAGGGGGGGGTTGGAACCAAGGCCAGCC
20._GU_241___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
21._GU_125_/C___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
22._GU_147_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._GU_241_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._GU_133_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
25._GU_241_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._GU_151___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
27._GU_154_/C___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
28._GU_249_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
29._GU_133_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
30._GU_144_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._GU_335___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
32._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
33._GU_255_/V___
AAGGGGGGGGTTGGAACCAAGGCCAACC
34._GU_185_/G___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
35._GU_255_/P___
AAGGGGGGGGTTGGAACCAAGGCCAACC
36._GU_185___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
37._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
38._GU_171_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
39._GU_296_/H___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._GU_195_/V___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
41._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
42._GU_353___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._GU_114_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._GU_261_/P___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._GU_221_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._GU_221_/C___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
48._GU_243_/H___
AAAGGGGGGGTTGGAACCAAGGCCAGCC
49._GU_261___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
50._GU_114___
AAAAGGGGGGTTGGAACCAAGGCCGGCC
51._GU_221_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
52._GU_221_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
53._GU_183_/G___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
54._KER_3___
AAAAGGGGGGAAGGAACCAAGGCCAGCC
55._GU_147_/H___
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCGGGGGGAAAACCAAAACCAAAAAACC
1._GU_175___
CCGGGGGGAAAACCAAAACCAAAAAACC
2._GU_156_B___
CCGGGGGGAAAACCAAAACCAAAAAACC
3._GU_156_B___
CCGGGGGGAAAACCAAAACCAAAAAACC
4._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
5._GU_123_/C___
CCGGGGAAAAAACCAAAACCAAAAAACC
6._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
7._GU_277_/G___
ACGGGGGGAAAACCAAAACCAAAAAACC
8._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
9._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
10._GU_136_/H___
CCGGGGGGGGAACCAAAACCAAAAAACC
11._GU_144_/C___
CCGGGGGGGGAACCAAAACCAAAAAACC
12._GU_310___
CCGGGGGGGGAACCAAAAAAAAAAAACC
13._GU_219_/F___
CCGGGGAGAGAACCAAAACCAAAAAACC
14._GU_263_/V___
CCGGGGAGAAAACCAAAACCAAAAAACC
15._GU_310_/P___
CCGGGGGGGGAACCAAAAAAAAAAAACC
16._GU_123_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
17._GU_125_/C___
CCGGGGGGAAAACCAAAACCAAAAAACC
18._GU_168_/H___
CCGGGGGGAGAACCAAAACCAAAAAACC
19._GU_123_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
20._GU_241___
ACGGGGGGAGAACCAAAAACAAAAAACC
21._GU_125_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
22._GU_147_/H___
CCGGGGGGAGAACCAAAAACAAAAAACC
23._GU_241_/P___
ACGGGGGGAGAACCAAAAACAAAAAACC
24._GU_133_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
25._GU_241_/P___
ACGGGGGGAGAACCAAAAACAAAAAACC
26._GU_151___
CCGGGGGGGGAACCAAAACCAAAAAACC
27._GU_154_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
28._GU_249_/H___
AAGGGGGGAAAACCAAAACCAAAAAACC
29._GU_133_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
30._GU_144_/C___
ACGGGGGGGGAACCAAAACCAAAAAACC
31._GU_335___
CCGGGGGGAGAACCAAAAACAAAAAACC
32._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
33._GU_255_/V___
CCGGGGAAAAAACCAAAACCAAAAAACC
34._GU_185_/G___
ACGGGGAGAAAACCAAAACCAAAAAACC
35._GU_255_/P___
CCGGGGAAAAAACCAAAACCAAAAAACC
36._GU_185___
ACGGGGAGAAAACCAAAACCAAAAAACC
37._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
38._GU_171_/C___
CCGGGGGGGGAACCAAAAACAAAAAACC
39._GU_296_/H___
ACGGGGGGGGAACCAAAACCAAAAAACC
40._GU_195_/V___
AAGGGGGGAAAACCAAAAACAAAAAACC
41._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
42._GU_353___
ACGGGGGGAGAACCAAAAACAAAAAACC
43._GU_114_/P___
CCGGGGAGAGAACCAAAACCAAAAAACC
44._GU_261_/P___
ACGGGGGGAGAACCAAAACCAAAAAACC
45._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
46._GU_221_/C___
ACGGGGGGAGAACCAAAAAAAAAAAACC
47._GU_221_/C___
ACGGGGGGAGAACCAAAAAAAAAAAACC
48._GU_243_/H___
AAGGGGGGGGAACCAAAAACAAAAAACC
49._GU_261___
ACGGGGGGAGAACCAAAACCAAAAAACC
50._GU_114___
CCGGGGAGAGAACCAAAACCAAAAAACC
51._GU_221_/H___
CCGGGGGGAGAACCAAAAAAAAAAAACC
52._GU_221_/H___
CCGGGGGGAGAACCAAAAAAAAAAAACC
53._GU_183_/G___
AAGGGGAGAAAACCAAAAACAAAAAACC
54._KER_3___
CCGGGGGGGGAACCAAAAAAAAAAAACC
55._GU_147_/H___
AAGGGGAGGGAACCAAAACCAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
1._GU_175___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
2._GU_156_B___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
3._GU_156_B___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
4._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
5._GU_123_/C___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
6._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
7._GU_277_/G___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
8._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
9._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
10._GU_136_/H___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
11._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
12._GU_310___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
13._GU_219_/F___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
14._GU_263_/V___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
15._GU_310_/P___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
16._GU_123_/V___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
17._GU_125_/C___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
18._GU_168_/H___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
19._GU_123_/V___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
20._GU_241___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
21._GU_125_/C___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
22._GU_147_/H___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
23._GU_241_/P___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
24._GU_133_/C___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
25._GU_241_/P___
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
26._GU_151___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
27._GU_154_/C___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
28._GU_249_/H___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
29._GU_133_/C___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
30._GU_144_/C___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
31._GU_335___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
32._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
33._GU_255_/V___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
34._GU_185_/G___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
35._GU_255_/P___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
36._GU_185___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
37._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
38._GU_171_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
39._GU_296_/H___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
40._GU_195_/V___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
41._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
42._GU_353___
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
43._GU_114_/P___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
44._GU_261_/P___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
45._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
46._GU_221_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
47._GU_221_/C___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
48._GU_243_/H___
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
49._GU_261___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
50._GU_114___
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
51._GU_221_/H___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
52._GU_221_/H___
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
53._GU_183_/G___
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
54._KER_3___
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
55._GU_147_/H___
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X

Input profile: CRU_156 RUQ_880

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._GU_175 GC-01-100-5-17

identical
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_156_B MITC-000403

96.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

3._GU_156_B GU-156B_Fld#_198_Plt#_2

96.3 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

4._GU_144_/C GC-01-73-4-9

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

5._GU_123_/C GC-01-95-5-12

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._GU_144_/C RUQ_191

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

7._GU_277_/G RUQ_771

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

8._GU_144_/C MITC-000615

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

9._GU_144_/C MITC-000578

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

10._GU_136_/H GC-03-19-2-8

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._GU_144_/C GC-01-73-4-9

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._GU_310 GC-08-268-8-40

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

13._GU_219_/F RUQ_768

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

14._GU_263_/V RUQ_1545

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_310_/P RUQ_815

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

16._GU_123_/V MITC-000597

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

17._GU_125_/C GC-01-138-7-17

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_168_/H GC-03-23-2-12

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_123_/V RUQ_1068

95.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._GU_241 GC-08-266-8-38

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

21._GU_125_/C RUQ_188

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_147_/H RUQ_222

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

23._GU_241_/P RUQ_1431

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._GU_133_/C MITC-000670

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

25._GU_241_/P MITC-000612

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

26._GU_151 GC-08-172-4-15

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._GU_154_/C GC-01-78-4-14

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._GU_249_/H RUQ_228

94.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._GU_133_/C GC-01-116-6-13

94.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._GU_144_/C GC-01-73-4-9

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

31._GU_335 GC-08-052-1-63

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_171_/C RUQ_195

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._GU_255_/V RUQ_1549

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._GU_185_/G MITC-000047

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

35._GU_255_/P MITC-000379

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

36._GU_185 GU_185_Fld#_200_Plt#_1

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

37._GU_171_/C GC-01-94-5-11

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

38._GU_171_/C GC-01-94-5-11

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

39._GU_296_/H GC-01-76-4-12

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

40._GU_195_/V RUQ_1069

93.8 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_261 GC-01-72-4-8

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

42._GU_353 GC-04-23-2-5

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

43._GU_114_/P RUQ_813

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

44._GU_261_/P RUQ_1370

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

45._GU_261 MITC-000581

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

46._GU_221_/C GC-01-75-4-11

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

47._GU_221_/C RUQ_200

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

48._GU_243_/H RUQ_814

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

49._GU_261 GC-01-72-4-8

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_114 GC-08-170-4-13

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_221_/H GU_221_H_Fld#_162_Plt#_1

92.1 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

52._GU_221_/H GC-01-74-4-10

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_183_/G RUQ_1543

91.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

54._KER_3 RUQ_406

91.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

55._GU_147_/H GC-01-80-4-16

91.3 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998