SNP Profiles matching FSC 13

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CCAAAAAAAAGGAACCAAGGAAAAAACC
1._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
2._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
3._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
4._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
5._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
6._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
9._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
12._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
17._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
18._RUQ_549
CCACAAAAAAGGAACCAAGGAAAAAACC
19._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
20._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
21._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
22._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
23._RUQ_1719
CCAAAGAAAAGGAACCAAGGAAAAAAAC
24._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
25._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
26._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
27._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
28._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
29._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
30._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
31._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
32._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
33._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
34._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
 1516171819202122232425262728
_Input profile
AAAAGGAAAAGGAAAACCGGCCAAAAGG
1._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
2._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._RUQ_683
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
14._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
15._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
16._GC-08-71-1-93
GGAAGGAA_GGAAAACCGGCCAAAAGG
17._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
18._RUQ_549
AAAAGGAGAAGGAAAACCGGCCAAAAGG
19._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
20._GC-08-254-8-22
AGAAGGAA_GGAAAAACAGCCAAAAGG
21._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
22._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
23._RUQ_1719
AAAAGGAAACGGAAAGCCGGCCAAAAAG
24._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
25._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
26._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
27._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
28._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
29._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
30._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
31._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
32._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
33._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
34._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
 2930313233343536373839404142
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
2._RUQ_557
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._RUQ_683
AATTAGAAGGAAGGGGGGCCTTTTGGGG
9._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._GC-01-56-3-11
AATTGGAAGGAAGGGGGG_TTTTGGGG
16._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._RUQ_549
AATTAGAAGGAAGGGGGGCCTTTTGGGG
19._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
22._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._RUQ_1719
AATTGGAAGGAAGGGGGGCCTTATGGGG
24._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT_GGGG
26._GC-01-48-3-3
AATTGGAAGGAAGGGGGG_TTTTGGGG
27._GC-06-15-1-15
AATTGGAAGGAAGGGGGG_TTTTGGGG
28._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
31._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
32._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
33._GC-08-109-3-8
AATTGGAAGGAAGGGGGG_TTTTGGGG
34._GC-08-277-8-49
AATTGGAAGGAAGGGGGG_TTTTGGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAAGG
1._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
2._RUQ_557
AAAAGGGGGGAAGGAACCCCGGAAAAGG
3._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._NACIONAL_Fld#_189_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._RUQ_683
AAAAGGGGGGTTGGAACCCCGGAAAAGG
9._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
14._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
15._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
16._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
18._RUQ_549
AAAAGGGGGGATGGAACCCCGGAAAAGG
19._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
20._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
21._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
22._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
23._RUQ_1719
AAAAGGGGGGATGGAACCCCAGAAAACG
24._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
25._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
26._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
27._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
28._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
29._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
30._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
31._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
32._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
33._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
34._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
 5758596061626364656667686970
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
2._RUQ_557
AAGGGGAAGGAACCGGAAAAAAAAAACC
3._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
4._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
5._NACIONAL_Fld#_189_Plt#_5
AAGGGGAAGGAACCGGAAAAAAAACCCC
6._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._RUQ_683
AAAGGGAAGGAACCGGAAAAAAAACCCC
9._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
12._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
14._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
15._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
16._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
17._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._RUQ_549
AAGGGGAAGGAACCGGAACCAAAAACCC
19._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
20._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
21._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
22._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
23._RUQ_1719
AAGGAGAAAGAACCGGAAAAAAAAAACC
24._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
25._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
26._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
27._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
28._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
29._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
30._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
31._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
32._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
33._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
34._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
1._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
2._RUQ_557
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
3._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._NACIONAL_Fld#_189_Plt#_5
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
6._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._RUQ_683
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X
9._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
17._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._RUQ_549
GGCCGGGGAGACAAGGGGAAAAAAX_XX_X
19._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
21._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
22._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._RUQ_1719
GGCCGGGGAGCCAAGGGGAAAAGGX_XX_X
24._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
26._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
27._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
30._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
31._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
32._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
34._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X

Input profile: FSC_13 RUQ_1535

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._GDL_3 RUQ_553

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._MAR_9 RUQ_557

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._MATINA_1_/6 RUQ_1715

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._MATINA_1_/6 MITC-000114

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

5._NACIONAL NACIONAL_Fld#_189_Plt#_5

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

6._BE_10 GC-08-90-2-13

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

7._B_12_/2_[POU] RUQ_436

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

8._GS_13 RUQ_683

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

9._SC_9_[UNK] RUQ_44

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._AMELONADO_[VAR] MITC-000366

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

11._LCT_EEN_46 MITC-000412

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

12._UF_273 MITC-000717

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

13._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

14._SIAL_42 SIAL_42_Fld#_146_Plt#_6

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._GU_207 GC-01-56-3-11

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._JA_9_/37_[POU] GC-08-71-1-93

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._SIAL_88 GC-01-52-3-7

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._DOM_30 RUQ_549

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._SIAL_70 GC-01-39-2-16

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

20._EEG_27 GC-08-254-8-22

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

21._BE_8 RUQ_1694

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._SIAL_44 SIAL_44_Fld#_66_Plt#_5

92.1 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._BE_5 RUQ_1719

91.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._SIAL_98 SIAL_98_Fld#_84_Plt#_5

91.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

25._SIAL_169 GC-01-41-2-18

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

26._SIAL_505 GC-01-48-3-3

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._SIC_628 GC-06-15-1-15

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._EEG_8 RUQ_1726

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._POUND_5_/C GC-01-118-6-15

90.2 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._CC_37 CC_37_Fld#_69B_Plt#_4

90.2 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

31._SIC_1 SIC_1_Fld#_51_Plt#_5

90.2 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

32._SIC_7 SIC_7_Fld#_68_Plt#_6

90.2 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

33._CATONGO_1 GC-08-109-3-8

90.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

34._CATONGO_1 GC-08-277-8-49

90.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998