SNP Profiles matching EET 233

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
1._GC-05-82-2-33	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
2._GC-05-82-2-33	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
3._RUQ_1056	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
4._IMC_67_Fld#_152A_Plt#_1	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
5._GC-05-149-4-2	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
6._RUQ_1590	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
7._RUQ_1678	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC
8._RUQ_1666	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	AG	CC
9._RUQ_861	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC
10._RUQ_985	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC
11._RUQ_734	AC	AA	AA	AC	AA	GG	GG	CC	AA	GG	GG	AA	GG	CC
12._MITC-000417	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC
13._GC-08-64-1-86	CC	AA	AA	CC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
14._RUQ_1449	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC
15._RUQ_874	CC	AA	AA	CC	AA	GG	GG	CC	AA	GG	GG	AA	AG	CC
16._MITC-000001	AC	AA	AA	AC	AA	AG	GG	CC	AA	GG	GG	AA	GG	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
1._GC-05-82-2-33	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
2._GC-05-82-2-33	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
3._RUQ_1056	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
4._IMC_67_Fld#_152A_Plt#_1	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
5._GC-05-149-4-2	AA	AC	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AC	AG
6._RUQ_1590	AA	AA	AA	AA	CC	GG	AG	GG	CC	AA	CC	AG	AA	AG
7._RUQ_1678	AA	AA	AA	AG	CC	GG	AA	GG	CC	AA	CC	AG	AC	GG
8._RUQ_1666	AA	AC	AA	AA	CC	GG	AG	GG	AC	AA	CC	AG	AC	AG
9._RUQ_861	AA	AA	AA	AG	CC	GG	AG	GG	CC	AA	CG	AG	AC	AG
10._RUQ_985	AA	AA	AA	AG	CC	GG	AG	GG	AC	AA	CC	AG	AC	AG
11._RUQ_734	AA	AA	AA	AG	CC	GG	AA	GG	AC	AA	CC	AG	AC	AG
12._MITC-000417	AA	AA	AA	AG	CC	GG	AG	GG	AC	AA	CC	AG	AC	AG
13._GC-08-64-1-86	AA	AC	AA	AA	CC	GG	AG	GG	AC	AA	CG	AA	AC	AG
14._RUQ_1449	AA	AA	AA	AG	CC	GG	AG	GG	AC	AA	CC	AG	AA	AG
15._RUQ_874	AA	AC	AA	AA	CC	GG	AG	GG	AC	AA	CG	AA	AC	AG
16._MITC-000001	AA	AA	AA	AG	CC	GG	AG	GG	AC	AA	CC	AG	AA	AG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	AA	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
1._GC-05-82-2-33	GG	AA	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
2._GC-05-82-2-33	GG	AA	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
3._RUQ_1056	GG	AA	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
4._IMC_67_Fld#_152A_Plt#_1	GG	AA	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
5._GC-05-149-4-2	GG	AA	GG	AC	CG	AG	GG	AG	GG	__	TT	TT	AA	GG
6._RUQ_1590	GG	AA	GG	AC	CC	AG	GG	AG	GG	CC	TT	TT	GG	GG
7._RUQ_1678	GG	AA	GG	AC	CG	AG	GG	AA	GG	CC	TT	TT	AA	GG
8._RUQ_1666	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AG	GG
9._RUQ_861	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AA	GG
10._RUQ_985	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	GG	GG
11._RUQ_734	GG	AA	GG	AC	GG	AG	GG	AA	GG	CC	TT	TT	AG	GG
12._MITC-000417	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	GG	GG
13._GC-08-64-1-86	GG	AA	GG	CC	CG	AA	GG	AG	GG	CC	TT	TT	AG	GG
14._RUQ_1449	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AG	GG
15._RUQ_874	GG	AA	GG	CC	CG	AA	GG	AG	GG	CC	TT	TT	AG	GG
16._MITC-000001	GG	AT	GG	AC	CG	AG	GG	AG	GG	CC	TT	TT	AG	GG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
1._GC-05-82-2-33	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
2._GC-05-82-2-33	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
3._RUQ_1056	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
4._IMC_67_Fld#_152A_Plt#_1	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
5._GC-05-149-4-2	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
6._RUQ_1590	AA	AG	AG	GG	GG	AT	GG	AG	AA	AC	AG	AC	GG	CG
7._RUQ_1678	AA	AG	GG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
8._RUQ_1666	AA	AG	AG	GG	GG	AT	GG	AG	AA	CC	AG	CC	GG	CG
9._RUQ_861	AA	AG	GG	GG	GG	AT	GG	GG	AA	CC	AG	AC	GG	GG
10._RUQ_985	AA	AG	AG	GG	GG	AT	GG	AG	AA	AC	AG	CC	GG	CG
11._RUQ_734	AA	AG	AG	GG	GG	AT	GG	GG	AA	AC	AG	CC	GG	GG
12._MITC-000417	AA	AG	AG	GG	GG	AT	GG	AG	AA	AC	AG	CC	GG	CG
13._GC-08-64-1-86	AA	GG	AG	GG	GG	AA	GG	AG	AA	AC	GG	AC	GG	GG
14._RUQ_1449	AA	GG	AG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG
15._RUQ_874	AA	GG	AG	GG	GG	AA	GG	AG	AA	AC	GG	AC	GG	GG
16._MITC-000001	AA	GG	AG	GG	GG	AT	GG	GG	AA	AC	AG	AC	GG	CG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
1._GC-05-82-2-33	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
2._GC-05-82-2-33	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
3._RUQ_1056	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
4._IMC_67_Fld#_152A_Plt#_1	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
5._GC-05-149-4-2	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
6._RUQ_1590	AC	GG	AG	GG	AA	AA	CC	GG	AA	AA	AC	AA	AC	CG
7._RUQ_1678	AC	GG	AG	GG	AA	AA	CC	GG	AA	AA	AC	AA	AC	CC
8._RUQ_1666	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AA	AA	CC	CC
9._RUQ_861	AA	GG	AG	GG	AA	AA	CC	GG	AA	AA	AC	AA	AC	CG
10._RUQ_985	AC	GG	AG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
11._RUQ_734	AC	GG	AG	GG	AA	AA	CC	GG	AA	AA	AA	AA	AC	CG
12._MITC-000417	AC	GG	AG	GG	AA	AA	CC	GG	AA	AA	AC	AA	CC	CG
13._GC-08-64-1-86	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	AC	CG
14._RUQ_1449	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AA	AA	AC	CC
15._RUQ_874	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AC	AA	AC	CG
16._MITC-000001	AC	GG	GG	GG	AA	AA	CC	GG	AA	AA	AA	AA	AC	CC

	71	72	73	74	75	76	77	78	79	80	81	82
_Input profile	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
1._GC-05-82-2-33	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
2._GC-05-82-2-33	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
3._RUQ_1056	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
4._IMC_67_Fld#_152A_Plt#_1	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
5._GC-05-149-4-2	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
6._RUQ_1590	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
7._RUQ_1678	GG	GG	GG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
8._RUQ_1666	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X
9._RUQ_861	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X
10._RUQ_985	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X
11._RUQ_734	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
12._MITC-000417	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X
13._GC-08-64-1-86	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
14._RUQ_1449	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X
15._RUQ_874	GG	GG	AG	GG	GG	CC	GG	GG	GG	AA	AA	AA	X_X	X_X
16._MITC-000001	GG	GG	GG	GG	GG	CC	GG	GG	GG	AT	AA	AA	X_X	X_X

Input profile: EET_233_[ECU] GC-05-149-4-2

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 27, Tree: 2

Notes: Brazil_Selections_Poss_grandparent

Mars, 2018

1._IMC_67 GC-05-82-2-33

identical
82 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 33, Tree: 1 > FP1

Notes: Brazil_Selections_Poss_grandparent

Mars, 2018

2._IMC_67 GC-05-82-2-33

identical
82 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 33, Tree: 1 > FP1

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

3._IMC_67 RUQ_1056

identical
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

4._IMC_67 IMC_67_Fld#_152A_Plt#_1

identical
82 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 152A, Tree: 1

Mars, 2018

5._EET_233_[ECU] GC-05-149-4-2

identical
81 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 27, Tree: 2

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

6._IMC_50 RUQ_1590

94.5 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

7._IMC_78 RUQ_1678

93.3 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

8._IMC_85 RUQ_1666

92.7 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

9._IMC_16 RUQ_861

92.1 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

10._IMC_20 RUQ_985

91.5 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

11._IMC_71 RUQ_734

91.5 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

12._IMC_20 MITC-000417

91.5 %
82 shared markers

View View all Clone Any

USDA-SHRS, United States of America

Mars, 2018

13._POUND_18 GC-08-64-1-86

90.9 %
82 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 8, Block: 1, Rep: 86, Tree: 1

Notes: MCCS_Structure_refs_above_0.9membership

Mars, 2018

14._IMC_31 RUQ_1449

90.9 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

15._POUND_18 RUQ_874

90.9 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

16._IMC_31 MITC-000001

90.9 %
82 shared markers

View View all Clone Any

USDA-SHRS, United States of America

Mars, 2018

Key to SNP Markers

1	Tcm001s00947643	2	Tcm003s01336581	3	Tcm003s07402719	4	Tcm006s26664133	5	TcSNP1034
6	TcSNP1060	7	TcSNP1062	8	TcSNP1063	9	TcSNP1075	10	TcSNP1096
11	TcSNP1111	12	TcSNP1149	13	TcSNP1156	14	TcSNP1175	15	TcSNP122
16	TcSNP1253	17	TcSNP1270	18	TcSNP1309	19	TcSNP1350	20	TcSNP1383
21	TcSNP1414	22	TcSNP1439	23	TcSNP144	24	TcSNP1442	25	TcSNP1458
26	TcSNP1484	27	TcSNP150	28	TcSNP151	29	TcSNP1520	30	TcSNP154
31	TcSNP174	32	TcSNP193	33	TcSNP226	34	TcSNP230	35	TcSNP240
36	TcSNP242	37	TcSNP25	38	TcSNP28	39	TcSNP316	40	TcSNP32
41	TcSNP329	42	TcSNP364	43	TcSNP372	44	TcSNP413	45	TcSNP418
46	TcSNP42	47	TcSNP429	48	TcSNP430	49	TcSNP448	50	TcSNP497
51	TcSNP521	52	TcSNP529	53	TcSNP547	54	TcSNP560	55	TcSNP561
56	TcSNP577	57	TcSNP591	58	TcSNP60	59	TcSNP602	60	TcSNP619
61	TcSNP653	62	TcSNP689	63	TcSNP723	64	TcSNP731	65	TcSNP75
66	TcSNP751	67	TcSNP776	68	TcSNP799	69	TcSNP823	70	TcSNP836
71	TcSNP860	72	TcSNP872	73	TcSNP891	74	TcSNP894	75	TcSNP899
76	TcSNP90	77	TcSNP917	78	TcSNP929	79	TcSNP944	80	TcSNP953
81	TcSNP994	82	TcSNP998

SNP Profiles matching EET 233

Show/Hide Profiles

Input profile: EET_233_[ECU] GC-05-149-4-2

1._IMC_67 GC-05-82-2-33

identical 82 shared markers

2._IMC_67 GC-05-82-2-33

identical 82 shared markers

3._IMC_67 RUQ_1056

identical 82 shared markers

4._IMC_67 IMC_67_Fld#_152A_Plt#_1

identical 82 shared markers

5._EET_233_[ECU] GC-05-149-4-2

identical 81 shared markers

6._IMC_50 RUQ_1590

94.5 % 82 shared markers

7._IMC_78 RUQ_1678

93.3 % 82 shared markers

8._IMC_85 RUQ_1666

92.7 % 82 shared markers

9._IMC_16 RUQ_861

92.1 % 82 shared markers

10._IMC_20 RUQ_985

91.5 % 82 shared markers

11._IMC_71 RUQ_734

91.5 % 82 shared markers

12._IMC_20 MITC-000417

91.5 % 82 shared markers

13._POUND_18 GC-08-64-1-86

90.9 % 82 shared markers

14._IMC_31 RUQ_1449

90.9 % 82 shared markers

15._POUND_18 RUQ_874

90.9 % 82 shared markers

16._IMC_31 MITC-000001

90.9 % 82 shared markers

identical
82 shared markers

identical
82 shared markers

identical
82 shared markers

identical
82 shared markers

identical
81 shared markers

94.5 %
82 shared markers

93.3 %
82 shared markers

92.7 %
82 shared markers

92.1 %
82 shared markers

91.5 %
82 shared markers

91.5 %
82 shared markers

91.5 %
82 shared markers

90.9 %
82 shared markers

90.9 %
82 shared markers

90.9 %
82 shared markers

90.9 %
82 shared markers