SNP Profiles matching GU-300

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCACAAAAAAGGAACCAAGGAAAAAACC
1._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
2._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
3._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
4._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
5._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
6._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
7._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
10._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
11._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
12._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
13._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
14._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
16._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
17._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
18._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
19._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
20._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
22._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
24._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
25._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
26._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
27._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
28._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
29._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
30._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
1._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
2._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
3._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
4._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
5._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
6._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
7._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
8._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
9._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
10._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
11._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
12._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
14._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
15._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
16._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
17._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
18._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
19._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
20._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
24._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
25._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
26._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
27._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
28._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
29._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
30._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
2._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
3._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
5._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
9._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
10._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
24._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
27._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
29._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
30._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGGGGGGGTTGGAGCCCCGGAAAACC
1._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
2._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
3._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
6._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
8._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
9._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
12._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
14._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
15._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
16._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
18._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
20._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
22._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
24._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
25._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
26._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
27._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
28._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
29._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
30._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AAGGAAAAGGAACCGGAAAAACAAAACC
1._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
2._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
3._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
5._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
6._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
8._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
9._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
12._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
13._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
14._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
15._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
16._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
17._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
19._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
22._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
24._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
25._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
26._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
27._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
28._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
29._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
30._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
2._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
3._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
7._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
10._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
11._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
19._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
22._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
24._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
26._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
27._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
28._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
30._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X

Input profile: GU_300 GC-08-63-1-85

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2