SNP Profiles matching JA-937

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAAAAAAAAGGAACCAAGGAAAAAACC
1._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
2._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
3._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
4._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
5._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
6._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
8._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
12._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
17._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
18._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
19._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
20._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
21._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
22._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
23._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
24._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
25._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
26._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
27._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
28._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
29._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
30._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
31._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
32._RUQ_1719
CCAAAGAAAAGGAACCAAGGAAAAAAAC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
35._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
36._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
37._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAAGGAAAACCGGCCAAAAGGAA
1._GC-01-118-6-15
GGAAGGAAGGAAAAAAGGCCGGAAGGAA
2._RUQ_1715
AAAAGGAAGGAAAACCGGCCAAAAGGAA
3._MITC-000114
AAAAGGAAGGAAAACCGGCCAAAAGGAA
4._GC-08-109-3-8
GGAAGGAAGGAAAAAAGGCCGGAAGGAA
5._GC-01-52-3-7
AGAAGGAAGGAAAAAAGGCCAAAAGGAA
6._GC-08-90-2-13
AAAAGGAAGGAAAACCGGCCAAAAGGAA
7._GC-08-254-8-22
AGAAGGAAGGAAAAACAGCCAAAAGGAA
8._RUQ_436
AAAAGGAAGGAAAACCGGCCAAAAGGAA
9._RUQ_44
AAAAGGAAGGAAAACCGGCCAAAAGGAA
10._MITC-000366
AAAAGGAAGGAAAACCGGCCAAAAGGAA
11._MITC-000412
AAAAGGAAGGAAAACCGGCCAAAAGGAA
12._MITC-000717
AAAAGGAAGGAAAACCGGCCAAAAGGAA
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAGGAAAACCGGCCAAAAGGAA
14._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAGGAAAACCGGCCAAAAGGAA
15._GC-01-56-3-11
AAAAGGAAGGAAAACCGGCCAAAAGGAA
16._GC-06-15-1-15
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
17._GC-01-39-2-16
AAAAGGAAGGAAAACCGGCCAAAAGGAA
18._RUQ_1535
AAAAGGAAGGAAAACCGGCCAAAAGGAA
19._RUQ_553
AAAAGGAAGGAAAACCGGCCAAAAGGAA
20._SIC_1_Fld#_51_Plt#_5
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
21._GC-08-277-8-49
AAAAGGAAGGAAAAACAACCGGAAGGAA
22._GC-01-41-2-18
AGAAGGAAGGAAAAACGGCCAGAAGGAA
23._GC-01-48-3-3
AGAAGGAAGGAAAAACGGCCAGAAGGAA
24._GC-08-63-1-85
GGAAGGAAGGAAAAAAAGCCAGAAGGAA
25._RUQ_1694
AAAAGGAAGGAAAGCCGGCCAAAAAGAA
26._CC_37_Fld#_69B_Plt#_4
AGAAGGAAGGAAAAACGGCCAAAAGGAA
27._SIC_2_Fld#_120_Plt#_6
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
28._SIC_7_Fld#_68_Plt#_6
AGAAGGAAGGAAAAACGGCCAAAAGGAA
29._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAGGAAAACCAGCCAGAAGGAA
30._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAGGAAAACCGGCCAAAAGGAA
31._RUQ_1726
AAAAAGAAGGAAAACCGGCCAAAAGGAA
32._RUQ_1719
AAAAGGAAGGAAAGCCGGCCAAAAAGAA
33._RUQ_557
AGAAGGAAGGAAAACCGGCCAAAAGGAA
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAGGAAAACCGGCCAAAAGGAA
35._RUQ_683
AAAAGGAAGGAAAACCGGCCAAAAGGAA
36._RUQ_1159
AAAAGGAAGGAAAAACGGCCAAAAGGAA
37._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAGGAAAAAAGGCCGGAAGGAA
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAGGAAAAAAGGCCGGAAGGAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
1._GC-01-118-6-15
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
2._RUQ_1715
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
3._MITC-000114
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
4._GC-08-109-3-8
TTGGAAGGAAGGGGGG__TTTTGGGGAA
5._GC-01-52-3-7
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
6._GC-08-90-2-13
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
7._GC-08-254-8-22
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
8._RUQ_436
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
9._RUQ_44
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
10._MITC-000366
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
11._MITC-000412
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
12._MITC-000717
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
14._SIAL_42_Fld#_146_Plt#_6
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
15._GC-01-56-3-11
TTGGAAGGAAGGGGGG__TTTTGGGGAA
16._GC-06-15-1-15
TTGGAAGGAAGGGGGG__TTTTGGGGAA
17._GC-01-39-2-16
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
18._RUQ_1535
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
19._RUQ_553
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
20._SIC_1_Fld#_51_Plt#_5
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
21._GC-08-277-8-49
TTGGAAGGAAGGGGGG__TTTTGGGGAA
22._GC-01-41-2-18
TTGGAAGGAAGGGGGGCCTT__GGGGAA
23._GC-01-48-3-3
TTGGAAGGAAGGGGGG__TTTTGGGGAA
24._GC-08-63-1-85
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
25._RUQ_1694
TTGGAAGGAGGGGGGGCCTTATGGGGAA
26._CC_37_Fld#_69B_Plt#_4
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
27._SIC_2_Fld#_120_Plt#_6
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
28._SIC_7_Fld#_68_Plt#_6
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
29._SIAL_44_Fld#_66_Plt#_5
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
30._SIAL_98_Fld#_84_Plt#_5
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
31._RUQ_1726
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
32._RUQ_1719
TTGGAAGGAAGGGGGGCCTTATGGGGAA
33._RUQ_557
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
34._NACIONAL_Fld#_189_Plt#_5
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
35._RUQ_683
TTAGAAGGAAGGGGGGCCTTTTGGGGAA
36._RUQ_1159
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
37._ROUND_LEAF_Fld#_203_Plt#_1
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGGGGGTTGGAACCCCGGAAAACCAA
1._GC-01-118-6-15
AAGGGGGGTTGGAACCCCGGAAAACCAA
2._RUQ_1715
AAGGGGGGTTGGAACCCCGGAAAACCAA
3._MITC-000114
AAGGGGGGTTGGAACCCCGGAAAACCAA
4._GC-08-109-3-8
AAGGGGGGTTGGAACCCCGGAAAACCAA
5._GC-01-52-3-7
AAGGGGGGTTGGAACCCCGGAAAACCAA
6._GC-08-90-2-13
AAGGGGGGTTGGAACCCCGGAAAACCAA
7._GC-08-254-8-22
AAGGGGGGTTGGAACCACGGAAAACGAC
8._RUQ_436
AAGGGGGGTTGGAACCCCGGAAAACCAA
9._RUQ_44
AAGGGGGGTTGGAACCCCGGAAAACCAA
10._MITC-000366
AAGGGGGGTTGGAACCCCGGAAAACCAA
11._MITC-000412
AAGGGGGGTTGGAACCCCGGAAAACCAA
12._MITC-000717
AAGGGGGGTTGGAACCCCGGAAAACCAA
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGGGGGTTGGAACCCCGGAAAACCAA
14._SIAL_42_Fld#_146_Plt#_6
AAGGGGGGTTGGAACCCCGGAAAACCAA
15._GC-01-56-3-11
AAGGGGGGTTGGAACCCCGGAAAACCAA
16._GC-06-15-1-15
AAGGGGGGTTGGAACCCCGGAAAACCCC
17._GC-01-39-2-16
AAGGGGGGTTGGGGCCCCGGAAAACCAC
18._RUQ_1535
AAGGGGGGTTGGAACCCCGGAAAAGGAA
19._RUQ_553
AAGGGGGGTTGGAACCCCGGAAAAGGAA
20._SIC_1_Fld#_51_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
21._GC-08-277-8-49
AGGGGGGGTTGGAACCCCGGAAAACCAA
22._GC-01-41-2-18
AGGGGGGGTTGGAGCCCCGGAAAACGAC
23._GC-01-48-3-3
AGGGGGGGTTGGAGCCCCGGAAAACGAC
24._GC-08-63-1-85
GGGGGGGGTTGGAGCCCCGGAAAACCAA
25._RUQ_1694
AAGGGGGGTTGGAGCCCCGGAAAACCAA
26._CC_37_Fld#_69B_Plt#_4
AGGGGGGGTTGGAACCCCGGAAAACCAC
27._SIC_2_Fld#_120_Plt#_6
GGGGGGGGTTGGAACCAAGGAAAACCAC
28._SIC_7_Fld#_68_Plt#_6
AGGGGGGGTTGGAACCCCGGAAAACCAC
29._SIAL_44_Fld#_66_Plt#_5
AAGGGGGGTTGGAGCCCCGGAAAACGAA
30._SIAL_98_Fld#_84_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
31._RUQ_1726
AGGGGGGGATGGAACCCCGGAAAACGAA
32._RUQ_1719
AAGGGGGGATGGAACCCCAGAAAACGAA
33._RUQ_557
AAGGGGGGAAGGAACCCCGGAAAAGGAA
34._NACIONAL_Fld#_189_Plt#_5
AAGGGGGGTTGGAACCCCGGAAAACCAA
35._RUQ_683
AAGGGGGGTTGGAACCCCGGAAAAGGAA
36._RUQ_1159
AAGGGGGGATGGAACCCCGGAAAACCAC
37._ROUND_LEAF_Fld#_203_Plt#_1
AAGGGGGGTTGGGGCCCCGGAAAACCAA
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGGGGGTTGGGGCCCCGGAAAACCAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGAAAAGGAACCGGAAAAAAAAAACCGG
1._GC-01-118-6-15
GGAAAAGGAACCGGAAAAAAAAAACCGG
2._RUQ_1715
GGGGAAGGAACCGGAAAAAAAAAACCGG
3._MITC-000114
GGGGAAGGAACCGGAAAAAAAAAACCGG
4._GC-08-109-3-8
GGAAAAGGAACCGGAAAAAAAAAACCGG
5._GC-01-52-3-7
GGAAAAGGAACCGGAAAAAAAAAACCGG
6._GC-08-90-2-13
GGAAAAGGAACCGGAAAAAAAAAACCGG
7._GC-08-254-8-22
GGAAAAGGAACCGGAAAAAAAAAACCGG
8._RUQ_436
GGAAAAGGAACCGGAAAAAAAAAACCGG
9._RUQ_44
GGAAAAGGAACCGGAAAAAAAAAACCGG
10._MITC-000366
GGAAAAGGAACCGGAAAAAAAAAACCGG
11._MITC-000412
GGAAAAGGAACCGGAAAAAAAAAACCGG
12._MITC-000717
GGAAAAGGAACCGGAAAAAAAAAACCGG
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
14._SIAL_42_Fld#_146_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
15._GC-01-56-3-11
GGAAAAGGAACCGGAAAAAAAAAACCGG
16._GC-06-15-1-15
GGAAAAGGAACCGGAAAAAAAAAACCGG
17._GC-01-39-2-16
GGAAAAGGAACCGGAAAAAAAAAACCGG
18._RUQ_1535
GGAAAAGGAACCGGAAAAAAAAAACCGG
19._RUQ_553
GGAAAAGGAACCGGAAAAAAAAAACCGG
20._SIC_1_Fld#_51_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
21._GC-08-277-8-49
GGAAAAGGAACCGGAAAAAAAAAACCGG
22._GC-01-41-2-18
GGAAAAGGAACCGGAAAAACAAAACCGG
23._GC-01-48-3-3
GGAAAAGGAACCGGAAAAACAAAACCGG
24._GC-08-63-1-85
GGAAAAGGAACCGGAAAAACAAAACCGG
25._RUQ_1694
GGAAAAGGAACCGGAAAAACAAAACCGG
26._CC_37_Fld#_69B_Plt#_4
GGAAAAGGAACCGGAAAAACAAAACCGG
27._SIC_2_Fld#_120_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
28._SIC_7_Fld#_68_Plt#_6
GGAAAAGGAACCGGAAAAACAAAACCGG
29._SIAL_44_Fld#_66_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
30._SIAL_98_Fld#_84_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
31._RUQ_1726
GGAAAAAGAAACGGAAAAACAAAACCGG
32._RUQ_1719
GGAGAAAGAACCGGAAAAAAAAAACCGG
33._RUQ_557
GGGGAAGGAACCGGAAAAAAAAAACCGG
34._NACIONAL_Fld#_189_Plt#_5
GGGGAAGGAACCGGAAAAAAAACCCCGG
35._RUQ_683
AGGGAAGGAACCGGAAAAAAAACCCCGG
36._RUQ_1159
GGAAAAGGAACCGGAGAAAAAAAACCAG
37._ROUND_LEAF_Fld#_203_Plt#_1
GGAAAAGGAACCGGAAAAAAAAAACCGG
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGAAAAGGAACCGGAAAAAAAAAACCGG
 71 72 73 74 75 76 77 78 79 80 81    
_Input profile
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
1._GC-01-118-6-15
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
2._RUQ_1715
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
3._MITC-000114
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
4._GC-08-109-3-8
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
5._GC-01-52-3-7
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
6._GC-08-90-2-13
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
7._GC-08-254-8-22
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
8._RUQ_436
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
9._RUQ_44
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
10._MITC-000366
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
11._MITC-000412
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
12._MITC-000717
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
13._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
14._SIAL_42_Fld#_146_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
15._GC-01-56-3-11
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
16._GC-06-15-1-15
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
17._GC-01-39-2-16
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
18._RUQ_1535
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
19._RUQ_553
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
20._SIC_1_Fld#_51_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
21._GC-08-277-8-49
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
22._GC-01-41-2-18
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
23._GC-01-48-3-3
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
24._GC-08-63-1-85
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
25._RUQ_1694
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
26._CC_37_Fld#_69B_Plt#_4
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
27._SIC_2_Fld#_120_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
28._SIC_7_Fld#_68_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
29._SIAL_44_Fld#_66_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
30._SIAL_98_Fld#_84_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
31._RUQ_1726
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
32._RUQ_1719
CCGGGGAGCCAAGGGGAAAAGGX_XX_XX_X
33._RUQ_557
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
34._NACIONAL_Fld#_189_Plt#_5
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
35._RUQ_683
CGGGGGAACCAAGGGGAAAAAAX_XX_XX_X
36._RUQ_1159
CCGGGGAAACAAGGAGAAAAGGX_XX_XX_X
37._ROUND_LEAF_Fld#_203_Plt#_1
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
38._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X

Input profile: JA_9_/37_[POU] GC-08-71-1-93

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._POUND_5_/C GC-01-118-6-15

96.3 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._MATINA_1_/6 RUQ_1715

96.3 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._MATINA_1_/6 MITC-000114

96.3 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

4._CATONGO_1 GC-08-109-3-8

96.3 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

5._SIAL_88 GC-01-52-3-7

95.7 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._BE_10 GC-08-90-2-13

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

7._EEG_27 GC-08-254-8-22

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._B_12_/2_[POU] RUQ_436

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

9._SC_9_[UNK] RUQ_44

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._AMELONADO_[VAR] MITC-000366

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

11._LCT_EEN_46 MITC-000412

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

12._UF_273 MITC-000717

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

13._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

95.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

14._SIAL_42 SIAL_42_Fld#_146_Plt#_6

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._GU_207 GC-01-56-3-11

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._SIC_628 GC-06-15-1-15

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._SIAL_70 GC-01-39-2-16

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._FSC_13 RUQ_1535

93.8 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._GDL_3 RUQ_553

93.8 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._SIC_1 SIC_1_Fld#_51_Plt#_5

93.8 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

21._CATONGO_1 GC-08-277-8-49

93.8 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

22._SIAL_169 GC-01-41-2-18

93.8 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._SIAL_505 GC-01-48-3-3

93.8 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._GU_300 GC-08-63-1-85

93.2 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._BE_8 RUQ_1694

93.2 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._CC_37 CC_37_Fld#_69B_Plt#_4

93.2 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

27._SIC_2 SIC_2_Fld#_120_Plt#_6

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

28._SIC_7 SIC_7_Fld#_68_Plt#_6

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

29._SIAL_44 SIAL_44_Fld#_66_Plt#_5

92.6 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

30._SIAL_98 SIAL_98_Fld#_84_Plt#_5

92.6 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

31._EEG_8 RUQ_1726

91.4 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._BE_5 RUQ_1719

90.7 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._MAR_9 RUQ_557

90.7 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._NACIONAL NACIONAL_Fld#_189_Plt#_5

90.7 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

35._GS_13 RUQ_683

90.1 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._N_38_[T38] RUQ_1159

90.1 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

90.1 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

38._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

90.1 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1383 20TcSNP1414
21TcSNP1439 22TcSNP144 23TcSNP1442 24TcSNP1458 25TcSNP1484
26TcSNP150 27TcSNP151 28TcSNP1520 29TcSNP154 30TcSNP174
31TcSNP193 32TcSNP226 33TcSNP230 34TcSNP240 35TcSNP242
36TcSNP25 37TcSNP28 38TcSNP316 39TcSNP32 40TcSNP329
41TcSNP364 42TcSNP372 43TcSNP413 44TcSNP418 45TcSNP42
46TcSNP429 47TcSNP430 48TcSNP448 49TcSNP497 50TcSNP521
51TcSNP529 52TcSNP547 53TcSNP560 54TcSNP561 55TcSNP577
56TcSNP591 57TcSNP60 58TcSNP602 59TcSNP619 60TcSNP653
61TcSNP689 62TcSNP723 63TcSNP731 64TcSNP75 65TcSNP751
66TcSNP776 67TcSNP799 68TcSNP823 69TcSNP836 70TcSNP860
71TcSNP872 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP90
76TcSNP917 77TcSNP929 78TcSNP944 79TcSNP953 80TcSNP994
81TcSNP998