SNP Profiles matching SIAL 505

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCACAAAAAAGGAACCAAGGAAAAAACC
1._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
2._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
3._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
6._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
7._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
8._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
9._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
10._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
11._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
12._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
13._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
14._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
16._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
17._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
18._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
19._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
20._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
21._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
22._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
24._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
25._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
26._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
27._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
28._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
29._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
30._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
32._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
33._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
34._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGAAGGAAAAGGAAAAACGGCCAGAAGG
1._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
2._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
3._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
4._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
5._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
6._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
7._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
9._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
10._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
11._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
13._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
14._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
15._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
16._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
17._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
18._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
19._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
20._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
24._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
25._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
26._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
27._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
28._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
29._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
30._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
32._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
33._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
34._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGTTTTGGGGAA
1._GC-01-41-2-18
AATTGGAAGGAAGGGGGGTT__GGGGAA
2._GC-08-63-1-85
AATTGGAAGGAAGGGGGGTTTTGGGGAA
3._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGTTTTGGGGAA
4._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
5._GC-08-254-8-22
AATTGGAAGGAAGGGGGGTTTTGGGGAA
6._GC-01-52-3-7
AATTGGAAGGAAGGGGGGTTTTGGGGAA
7._GC-01-39-2-16
AATTGGAAGGAAGGGGGGTTTTGGGGAA
8._GC-06-15-1-15
AATTGGAAGGAAGGGGGGTTTTGGGGAA
9._GC-08-71-1-93
AATTGGAAGGAAGGGGGGTTTTGGGGAA
10._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
11._GC-08-90-2-13
AATTGGAAGGAAGGGGGGTTTTGGGGAA
12._GC-08-109-3-8
AATTGGAAGGAAGGGGGGTTTTGGGGAA
13._GC-08-277-8-49
AATTGGAAGGAAGGGGGGTTTTGGGGAA
14._GC-01-56-3-11
AATTGGAAGGAAGGGGGGTTTTGGGGAA
15._GC-01-118-6-15
AATTGGAAGGAAGGGGGGTTTTGGGGAA
16._RUQ_436
AATTGGAAGGAAGGGGGGTTTTGGGGAA
17._RUQ_1715
AATTGGAAGGAAGGGGGGTTTTGGGGAA
18._RUQ_44
AATTGGAAGGAAGGGGGGTTTTGGGGAA
19._MITC-000366
AATTGGAAGGAAGGGGGGTTTTGGGGAA
20._MITC-000114
AATTGGAAGGAAGGGGGGTTTTGGGGAA
21._MITC-000412
AATTGGAAGGAAGGGGGGTTTTGGGGAA
22._MITC-000717
AATTGGAAGGAAGGGGGGTTTTGGGGAA
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
24._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
25._RUQ_1694
AATTGGAAGGAGGGGGGGTTATGGGGAA
26._RUQ_1726
AATTGGAAGGAAGGGGGGTTTTGGGGAA
27._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
28._RUQ_1535
AATTGGAAGGAAGGGGGGTTTTGGGGAA
29._RUQ_553
AATTGGAAGGAAGGGGGGTTTTGGGGAA
30._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGTTTTGGGGAA
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGTTTTGGGGAA
32._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
33._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
34._RUQ_1159
AATTGGAAGGAAGGGGGGTTTTGGGGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AGGGGGGGTTGGAGCCCCGGAAAACGAC
1._GC-01-41-2-18
AGGGGGGGTTGGAGCCCCGGAAAACGAC
2._GC-08-63-1-85
GGGGGGGGTTGGAGCCCCGGAAAACCAA
3._CC_37_Fld#_69B_Plt#_4
AGGGGGGGTTGGAACCCCGGAAAACCAC
4._SIC_7_Fld#_68_Plt#_6
AGGGGGGGTTGGAACCCCGGAAAACCAC
5._GC-08-254-8-22
AAGGGGGGTTGGAACCACGGAAAACGAC
6._GC-01-52-3-7
AAGGGGGGTTGGAACCCCGGAAAACCAA
7._GC-01-39-2-16
AAGGGGGGTTGGGGCCCCGGAAAACCAC
8._GC-06-15-1-15
AAGGGGGGTTGGAACCCCGGAAAACCCC
9._GC-08-71-1-93
AAGGGGGGTTGGAACCCCGGAAAACCAA
10._SIAL_44_Fld#_66_Plt#_5
AAGGGGGGTTGGAGCCCCGGAAAACGAA
11._GC-08-90-2-13
AAGGGGGGTTGGAACCCCGGAAAACCAA
12._GC-08-109-3-8
AAGGGGGGTTGGAACCCCGGAAAACCAA
13._GC-08-277-8-49
AGGGGGGGTTGGAACCCCGGAAAACCAA
14._GC-01-56-3-11
AAGGGGGGTTGGAACCCCGGAAAACCAA
15._GC-01-118-6-15
AAGGGGGGTTGGAACCCCGGAAAACCAA
16._RUQ_436
AAGGGGGGTTGGAACCCCGGAAAACCAA
17._RUQ_1715
AAGGGGGGTTGGAACCCCGGAAAACCAA
18._RUQ_44
AAGGGGGGTTGGAACCCCGGAAAACCAA
19._MITC-000366
AAGGGGGGTTGGAACCCCGGAAAACCAA
20._MITC-000114
AAGGGGGGTTGGAACCCCGGAAAACCAA
21._MITC-000412
AAGGGGGGTTGGAACCCCGGAAAACCAA
22._MITC-000717
AAGGGGGGTTGGAACCCCGGAAAACCAA
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGGGGGTTGGAACCCCGGAAAACCAA
24._SIAL_42_Fld#_146_Plt#_6
AAGGGGGGTTGGAACCCCGGAAAACCAA
25._RUQ_1694
AAGGGGGGTTGGAGCCCCGGAAAACCAA
26._RUQ_1726
AGGGGGGGATGGAACCCCGGAAAACGAA
27._SIC_2_Fld#_120_Plt#_6
GGGGGGGGTTGGAACCAAGGAAAACCAC
28._RUQ_1535
AAGGGGGGTTGGAACCCCGGAAAAGGAA
29._RUQ_553
AAGGGGGGTTGGAACCCCGGAAAAGGAA
30._ROUND_LEAF_Fld#_203_Plt#_1
AAGGGGGGTTGGGGCCCCGGAAAACCAA
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGGGGGTTGGGGCCCCGGAAAACCAA
32._SIAL_98_Fld#_84_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
33._SIC_1_Fld#_51_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
34._RUQ_1159
AAGGGGGGATGGAACCCCGGAAAACCAC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGAAAAGGAACCGGAAAAACAAAACCGG
1._GC-01-41-2-18
GGAAAAGGAACCGGAAAAACAAAACCGG
2._GC-08-63-1-85
GGAAAAGGAACCGGAAAAACAAAACCGG
3._CC_37_Fld#_69B_Plt#_4
GGAAAAGGAACCGGAAAAACAAAACCGG
4._SIC_7_Fld#_68_Plt#_6
GGAAAAGGAACCGGAAAAACAAAACCGG
5._GC-08-254-8-22
GGAAAAGGAACCGGAAAAAAAAAACCGG
6._GC-01-52-3-7
GGAAAAGGAACCGGAAAAAAAAAACCGG
7._GC-01-39-2-16
GGAAAAGGAACCGGAAAAAAAAAACCGG
8._GC-06-15-1-15
GGAAAAGGAACCGGAAAAAAAAAACCGG
9._GC-08-71-1-93
GGAAAAGGAACCGGAAAAAAAAAACCGG
10._SIAL_44_Fld#_66_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
11._GC-08-90-2-13
GGAAAAGGAACCGGAAAAAAAAAACCGG
12._GC-08-109-3-8
GGAAAAGGAACCGGAAAAAAAAAACCGG
13._GC-08-277-8-49
GGAAAAGGAACCGGAAAAAAAAAACCGG
14._GC-01-56-3-11
GGAAAAGGAACCGGAAAAAAAAAACCGG
15._GC-01-118-6-15
GGAAAAGGAACCGGAAAAAAAAAACCGG
16._RUQ_436
GGAAAAGGAACCGGAAAAAAAAAACCGG
17._RUQ_1715
GGGGAAGGAACCGGAAAAAAAAAACCGG
18._RUQ_44
GGAAAAGGAACCGGAAAAAAAAAACCGG
19._MITC-000366
GGAAAAGGAACCGGAAAAAAAAAACCGG
20._MITC-000114
GGGGAAGGAACCGGAAAAAAAAAACCGG
21._MITC-000412
GGAAAAGGAACCGGAAAAAAAAAACCGG
22._MITC-000717
GGAAAAGGAACCGGAAAAAAAAAACCGG
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
24._SIAL_42_Fld#_146_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
25._RUQ_1694
GGAAAAGGAACCGGAAAAACAAAACCGG
26._RUQ_1726
GGAAAAAGAAACGGAAAAACAAAACCGG
27._SIC_2_Fld#_120_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
28._RUQ_1535
GGAAAAGGAACCGGAAAAAAAAAACCGG
29._RUQ_553
GGAAAAGGAACCGGAAAAAAAAAACCGG
30._ROUND_LEAF_Fld#_203_Plt#_1
GGAAAAGGAACCGGAAAAAAAAAACCGG
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGAAAAGGAACCGGAAAAAAAAAACCGG
32._SIAL_98_Fld#_84_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
33._SIC_1_Fld#_51_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
34._RUQ_1159
GGAAAAGGAACCGGAGAAAAAAAACCAG
 71 72 73 74 75 76 77 78 79 80 81    
_Input profile
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
1._GC-01-41-2-18
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
2._GC-08-63-1-85
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
3._CC_37_Fld#_69B_Plt#_4
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
4._SIC_7_Fld#_68_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
5._GC-08-254-8-22
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
6._GC-01-52-3-7
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
7._GC-01-39-2-16
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
8._GC-06-15-1-15
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
9._GC-08-71-1-93
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
10._SIAL_44_Fld#_66_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
11._GC-08-90-2-13
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
12._GC-08-109-3-8
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
13._GC-08-277-8-49
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
14._GC-01-56-3-11
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
15._GC-01-118-6-15
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
16._RUQ_436
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
17._RUQ_1715
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
18._RUQ_44
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
19._MITC-000366
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
20._MITC-000114
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
21._MITC-000412
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
22._MITC-000717
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
23._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
24._SIAL_42_Fld#_146_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
25._RUQ_1694
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
26._RUQ_1726
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
27._SIC_2_Fld#_120_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
28._RUQ_1535
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
29._RUQ_553
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
30._ROUND_LEAF_Fld#_203_Plt#_1
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
31._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
32._SIAL_98_Fld#_84_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
33._SIC_1_Fld#_51_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
34._RUQ_1159
CCGGGGAAACAAGGAGAAAAGGX_XX_XX_X

Input profile: SIAL_505 GC-01-48-3-3

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._SIAL_169 GC-01-41-2-18

identical
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_300 GC-08-63-1-85

95.7 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

3._CC_37 CC_37_Fld#_69B_Plt#_4

95.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

4._SIC_7 SIC_7_Fld#_68_Plt#_6

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

5._EEG_27 GC-08-254-8-22

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._SIAL_88 GC-01-52-3-7

94.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

7._SIAL_70 GC-01-39-2-16

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._SIC_628 GC-06-15-1-15

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._JA_9_/37_[POU] GC-08-71-1-93

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._SIAL_44 SIAL_44_Fld#_66_Plt#_5

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

11._BE_10 GC-08-90-2-13

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

12._CATONGO_1 GC-08-109-3-8

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

13._CATONGO_1 GC-08-277-8-49

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

14._GU_207 GC-01-56-3-11

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

15._POUND_5_/C GC-01-118-6-15

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._B_12_/2_[POU] RUQ_436

92.6 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

17._MATINA_1_/6 RUQ_1715

92.6 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

18._SC_9_[UNK] RUQ_44

92.6 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._AMELONADO_[VAR] MITC-000366

92.6 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

20._MATINA_1_/6 MITC-000114

92.6 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

21._LCT_EEN_46 MITC-000412

92.6 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

22._UF_273 MITC-000717

92.6 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

23._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

92.6 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

24._SIAL_42 SIAL_42_Fld#_146_Plt#_6

92.6 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

25._BE_8 RUQ_1694

92 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._EEG_8 RUQ_1726

92 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

27._SIC_2 SIC_2_Fld#_120_Plt#_6

92 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

28._FSC_13 RUQ_1535

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._GDL_3 RUQ_553

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

30._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

91.4 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

31._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

91.4 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

32._SIAL_98 SIAL_98_Fld#_84_Plt#_5

91.4 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

33._SIC_1 SIC_1_Fld#_51_Plt#_5

91.4 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

34._N_38_[T38] RUQ_1159

90.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP316 39TcSNP32 40TcSNP329
41TcSNP364 42TcSNP372 43TcSNP413 44TcSNP418 45TcSNP42
46TcSNP429 47TcSNP430 48TcSNP448 49TcSNP497 50TcSNP521
51TcSNP529 52TcSNP547 53TcSNP560 54TcSNP561 55TcSNP577
56TcSNP591 57TcSNP60 58TcSNP602 59TcSNP619 60TcSNP653
61TcSNP689 62TcSNP723 63TcSNP731 64TcSNP75 65TcSNP751
66TcSNP776 67TcSNP799 68TcSNP823 69TcSNP836 70TcSNP860
71TcSNP872 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP90
76TcSNP917 77TcSNP929 78TcSNP944 79TcSNP953 80TcSNP994
81TcSNP998