SNP Profiles matching SIAL-70

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGAGAAAACC
1._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
2._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
11._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
12._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
15._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
17._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
18._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
21._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
22._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
23._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
24._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
25._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
26._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
27._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
28._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
29._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
30._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
31._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
32._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
35._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
36._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
37._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAGGAAAAGGAAAACCGGCCAAAAGG
1._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
2._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
11._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
14._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
15._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
16._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
17._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
18._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
21._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
22._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
23._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
24._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
25._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
26._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
27._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
28._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
29._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
30._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
31._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
32._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
33._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
35._RUQ_683
AAAAGGAAAAGGAAAACCGGCCAAAAGG
36._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
37._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
2._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
9._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
10._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
17._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._RUQ_1159
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
23._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
24._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
25._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
27._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
31._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
32._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
33._RUQ_557
AATTGGAAGGAAGGGGGGCCTTTTGGGG
34._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
35._RUQ_683
AATTAGAAGGAAGGGGGGCCTTTTGGGG
36._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
37._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGGGCCCCGGAAAACC
1._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
14._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
15._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
16._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
18._RUQ_1159
AAAAGGGGGGATGGAACCCCGGAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
21._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
22._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
23._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
24._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
25._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
26._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
27._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
28._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
29._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
30._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
31._NACIONAL_Fld#_189_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
32._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
33._RUQ_557
AAAAGGGGGGAAGGAACCCCGGAAAAGG
34._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
35._RUQ_683
AAAAGGGGGGTTGGAACCCCGGAAAAGG
36._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
37._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
ACGGAAAAGGAACCGGAAAAAAAAAACC
1._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
2._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
12._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
13._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
14._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
15._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
16._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
17._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._RUQ_1159
ACGGAAAAGGAACCGGAGAAAAAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
22._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
23._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
24._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
25._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
26._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
27._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
28._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
29._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
30._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
31._NACIONAL_Fld#_189_Plt#_5
AAGGGGAAGGAACCGGAAAAAAAACCCC
32._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
33._RUQ_557
AAGGGGAAGGAACCGGAAAAAAAAAACC
34._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
35._RUQ_683
AAAGGGAAGGAACCGGAAAAAAAACCCC
36._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
37._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._RUQ_1159
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
19._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
22._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
23._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
24._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
26._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
27._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
29._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
30._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
31._NACIONAL_Fld#_189_Plt#_5
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
32._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._RUQ_557
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
34._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
35._RUQ_683
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X
36._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
37._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X

Input profile: SIAL_70 GC-01-39-2-16

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1