SNP Profiles matching SIAL 88

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 1234567891011121314
_Input profile
CCCCAAAAAAGGAACCAAGGAAAAAACC
1._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
2._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
12._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
14._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
17._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
18._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
19._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
21._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
23._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
24._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
25._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
26._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
27._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
28._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
29._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
30._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
31._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
32._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
35._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
36._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
37._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
 1516171819202122232425262728
_Input profile
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
1._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
2._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
14._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
15._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
16._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
17._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
18._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
21._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
22._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
23._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
24._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
25._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
26._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
27._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
28._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
29._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
30._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
31._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
32._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
33._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
35._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
36._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
37._RUQ_683
AAAAGGAAAAGGAAAACCGGCCAAAAGG
 2930313233343536373839404142
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
2._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
9._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
11._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
24._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
26._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
27._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
31._RUQ_1159
AATTGGAAGGAAGGGGGGCCTTTTGGGG
32._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
33._RUQ_557
AATTGGAAGGAAGGGGGGCCTTTTGGGG
34._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
35._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
36._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
37._RUQ_683
AATTAGAAGGAAGGGGGGCCTTTTGGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAACC
1._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
12._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
14._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
15._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
16._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
18._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
21._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
22._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
23._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
24._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
25._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
26._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
27._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
28._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
29._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
30._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
31._RUQ_1159
AAAAGGGGGGATGGAACCCCGGAAAACC
32._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
33._RUQ_557
AAAAGGGGGGAAGGAACCCCGGAAAAGG
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
35._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
36._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
37._RUQ_683
AAAAGGGGGGTTGGAACCCCGGAAAAGG
 5758596061626364656667686970
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
2._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
12._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
13._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
14._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
15._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
16._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
17._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
18._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
23._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
24._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
25._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
26._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
27._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
28._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
29._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
30._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
31._RUQ_1159
ACGGAAAAGGAACCGGAGAAAAAAAACC
32._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
33._RUQ_557
AAGGGGAAGGAACCGGAAAAAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
AAGGGGAAGGAACCGGAAAAAAAACCCC
35._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
36._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
37._RUQ_683
AAAGGGAAGGAACCGGAAAAAAAACCCC
 717273747576777879808182  
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
17._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
19._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
22._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
24._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
25._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
26._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
27._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
30._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
31._RUQ_1159
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
32._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._RUQ_557
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
34._NACIONAL_Fld#_189_Plt#_5
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
35._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
36._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
37._RUQ_683
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X

Input profile: SIAL_88 GC-01-52-3-7

 
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._SIC_628 GC-06-15-1-15

98.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._BE_10 GC-08-90-2-13

97 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

3._B_12_/2_[POU] RUQ_436

97 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._SC_9_[UNK] RUQ_44

97 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

5._AMELONADO_[VAR] MITC-000366

97 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

6._LCT_EEN_46 MITC-000412

97 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

7._UF_273 MITC-000717

97 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

8._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

97 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

9._SIAL_42 SIAL_42_Fld#_146_Plt#_6

97 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

10._GU_207 GC-01-56-3-11

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._SIAL_70 GC-01-39-2-16

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._MATINA_1_/6 RUQ_1715

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

13._MATINA_1_/6 MITC-000114

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

14._CC_37 CC_37_Fld#_69B_Plt#_4

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

15._SIC_7 SIC_7_Fld#_68_Plt#_6

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

16._JA_9_/37_[POU] GC-08-71-1-93

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_300 GC-08-63-1-85

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._POUND_5_/C GC-01-118-6-15

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

20._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

21._SIAL_98 SIAL_98_Fld#_84_Plt#_5

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

22._SIC_1 SIC_1_Fld#_51_Plt#_5

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._CATONGO_1 GC-08-109-3-8

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._EEG_27 GC-08-254-8-22

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._SIAL_169 GC-01-41-2-18

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

26._SIAL_505 GC-01-48-3-3

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._SIAL_44 SIAL_44_Fld#_66_Plt#_5

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

28._SIC_2 SIC_2_Fld#_120_Plt#_6

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

29._FSC_13 RUQ_1535

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

30._GDL_3 RUQ_553

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

31._N_38_[T38] RUQ_1159

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._BE_8 RUQ_1694

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._MAR_9 RUQ_557

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._NACIONAL NACIONAL_Fld#_189_Plt#_5

92.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

35._CATONGO_1 GC-08-277-8-49

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

36._EEG_8 RUQ_1726

91.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._GS_13 RUQ_683

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998