SNP Profiles matching SIAL-88

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGAAAAAACC
1._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
2._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
12._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
14._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
17._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
18._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
19._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
21._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
23._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
24._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
25._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
26._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
27._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
28._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
29._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
30._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
31._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
32._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
35._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
36._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
37._RUQ_683
CCACAAAAAAGGAACCAAGGAAAAAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
1._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
2._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
14._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
15._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
16._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
17._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
18._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
21._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
22._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
23._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
24._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
25._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
26._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
27._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
28._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
29._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
30._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
31._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
32._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
33._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
35._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
36._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
37._RUQ_683
AAAAGGAAAAGGAAAACCGGCCAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
2._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
9._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
11._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
24._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
26._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
27._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
31._RUQ_1159
AATTGGAAGGAAGGGGGGCCTTTTGGGG
32._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
33._RUQ_557
AATTGGAAGGAAGGGGGGCCTTTTGGGG
34._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
35._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
36._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
37._RUQ_683
AATTAGAAGGAAGGGGGGCCTTTTGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAACC
1._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
12._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
14._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
15._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
16._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
18._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
21._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
22._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
23._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
24._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
25._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
26._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
27._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
28._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
29._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
30._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
31._RUQ_1159
AAAAGGGGGGATGGAACCCCGGAAAACC
32._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
33._RUQ_557
AAAAGGGGGGAAGGAACCCCGGAAAAGG
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
35._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
36._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
37._RUQ_683
AAAAGGGGGGTTGGAACCCCGGAAAAGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
2._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
12._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
13._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
14._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
15._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
16._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
17._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
18._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
19._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
22._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
23._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
24._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
25._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
26._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
27._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
28._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
29._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
30._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
31._RUQ_1159
ACGGAAAAGGAACCGGAGAAAAAAAACC
32._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
33._RUQ_557
AAGGGGAAGGAACCGGAAAAAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
AAGGGGAAGGAACCGGAAAAAAAACCCC
35._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
36._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
37._RUQ_683
AAAGGGAAGGAACCGGAAAAAAAACCCC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
17._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
19._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
22._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
24._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
25._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
26._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
27._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
30._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
31._RUQ_1159
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
32._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._RUQ_557
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
34._NACIONAL_Fld#_189_Plt#_5
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
35._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
36._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
37._RUQ_683
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X

Input profile: SIAL_88 GC-01-52-3-7

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1