SNP Profiles matching SIC-628

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGAAAAAACC
1._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
2._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
3._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
6._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
12._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
13._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
15._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
17._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
18._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
19._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
20._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
21._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
22._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
23._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
24._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
25._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
26._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
27._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
29._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
30._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
31._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
32._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
33._RUQ_557
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._NACIONAL_Fld#_189_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
35._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
1._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
2._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
3._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
13._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
14._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
15._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
16._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
17._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
18._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
19._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
20._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
21._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
22._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
23._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
24._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
25._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
26._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
27._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
29._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
30._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
31._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
32._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
33._RUQ_557
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._NACIONAL_Fld#_189_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
35._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGTTTTGGGGAA
1._GC-01-52-3-7
AATTGGAAGGAAGGGGGGTTTTGGGGAA
2._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
3._GC-08-90-2-13
AATTGGAAGGAAGGGGGGTTTTGGGGAA
4._GC-01-56-3-11
AATTGGAAGGAAGGGGGGTTTTGGGGAA
5._GC-01-39-2-16
AATTGGAAGGAAGGGGGGTTTTGGGGAA
6._RUQ_436
AATTGGAAGGAAGGGGGGTTTTGGGGAA
7._RUQ_44
AATTGGAAGGAAGGGGGGTTTTGGGGAA
8._MITC-000366
AATTGGAAGGAAGGGGGGTTTTGGGGAA
9._MITC-000412
AATTGGAAGGAAGGGGGGTTTTGGGGAA
10._MITC-000717
AATTGGAAGGAAGGGGGGTTTTGGGGAA
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
12._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGTTTTGGGGAA
13._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
14._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
15._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
16._GC-08-71-1-93
AATTGGAAGGAAGGGGGGTTTTGGGGAA
17._GC-08-63-1-85
AATTGGAAGGAAGGGGGGTTTTGGGGAA
18._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGTTTTGGGGAA
19._GC-08-109-3-8
AATTGGAAGGAAGGGGGGTTTTGGGGAA
20._GC-01-118-6-15
AATTGGAAGGAAGGGGGGTTTTGGGGAA
21._GC-01-48-3-3
AATTGGAAGGAAGGGGGGTTTTGGGGAA
22._RUQ_1715
AATTGGAAGGAAGGGGGGTTTTGGGGAA
23._MITC-000114
AATTGGAAGGAAGGGGGGTTTTGGGGAA
24._GC-08-254-8-22
AATTGGAAGGAAGGGGGGTTTTGGGGAA
25._GC-01-41-2-18
AATTGGAAGGAAGGGGGGTT__GGGGAA
26._RUQ_1159
AATTGGAAGGAAGGGGGGTTTTGGGGAA
27._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGTTTTGGGGAA
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGTTTTGGGGAA
29._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
30._RUQ_1535
AATTGGAAGGAAGGGGGGTTTTGGGGAA
31._RUQ_553
AATTGGAAGGAAGGGGGGTTTTGGGGAA
32._RUQ_1694
AATTGGAAGGAGGGGGGGTTATGGGGAA
33._RUQ_557
AATTGGAAGGAAGGGGGGTTTTGGGGAA
34._NACIONAL_Fld#_189_Plt#_5
AATTGGAAGGAAGGGGGGTTTTGGGGAA
35._GC-08-277-8-49
AATTGGAAGGAAGGGGGGTTTTGGGGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGGGGGTTGGAACCCCGGAAAACCCC
1._GC-01-52-3-7
AAGGGGGGTTGGAACCCCGGAAAACCAA
2._SIC_1_Fld#_51_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
3._GC-08-90-2-13
AAGGGGGGTTGGAACCCCGGAAAACCAA
4._GC-01-56-3-11
AAGGGGGGTTGGAACCCCGGAAAACCAA
5._GC-01-39-2-16
AAGGGGGGTTGGGGCCCCGGAAAACCAC
6._RUQ_436
AAGGGGGGTTGGAACCCCGGAAAACCAA
7._RUQ_44
AAGGGGGGTTGGAACCCCGGAAAACCAA
8._MITC-000366
AAGGGGGGTTGGAACCCCGGAAAACCAA
9._MITC-000412
AAGGGGGGTTGGAACCCCGGAAAACCAA
10._MITC-000717
AAGGGGGGTTGGAACCCCGGAAAACCAA
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGGGGGTTGGAACCCCGGAAAACCAA
12._CC_37_Fld#_69B_Plt#_4
AGGGGGGGTTGGAACCCCGGAAAACCAC
13._SIAL_42_Fld#_146_Plt#_6
AAGGGGGGTTGGAACCCCGGAAAACCAA
14._SIAL_98_Fld#_84_Plt#_5
AAGGGGGGTTGGAACCAAGGAAAACCCC
15._SIC_7_Fld#_68_Plt#_6
AGGGGGGGTTGGAACCCCGGAAAACCAC
16._GC-08-71-1-93
AAGGGGGGTTGGAACCCCGGAAAACCAA
17._GC-08-63-1-85
GGGGGGGGTTGGAGCCCCGGAAAACCAA
18._SIC_2_Fld#_120_Plt#_6
GGGGGGGGTTGGAACCAAGGAAAACCAC
19._GC-08-109-3-8
AAGGGGGGTTGGAACCCCGGAAAACCAA
20._GC-01-118-6-15
AAGGGGGGTTGGAACCCCGGAAAACCAA
21._GC-01-48-3-3
AGGGGGGGTTGGAGCCCCGGAAAACGAC
22._RUQ_1715
AAGGGGGGTTGGAACCCCGGAAAACCAA
23._MITC-000114
AAGGGGGGTTGGAACCCCGGAAAACCAA
24._GC-08-254-8-22
AAGGGGGGTTGGAACCACGGAAAACGAC
25._GC-01-41-2-18
AGGGGGGGTTGGAGCCCCGGAAAACGAC
26._RUQ_1159
AAGGGGGGATGGAACCCCGGAAAACCAC
27._ROUND_LEAF_Fld#_203_Plt#_1
AAGGGGGGTTGGGGCCCCGGAAAACCAA
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGGGGGTTGGGGCCCCGGAAAACCAA
29._SIAL_44_Fld#_66_Plt#_5
AAGGGGGGTTGGAGCCCCGGAAAACGAA
30._RUQ_1535
AAGGGGGGTTGGAACCCCGGAAAAGGAA
31._RUQ_553
AAGGGGGGTTGGAACCCCGGAAAAGGAA
32._RUQ_1694
AAGGGGGGTTGGAGCCCCGGAAAACCAA
33._RUQ_557
AAGGGGGGAAGGAACCCCGGAAAAGGAA
34._NACIONAL_Fld#_189_Plt#_5
AAGGGGGGTTGGAACCCCGGAAAACCAA
35._GC-08-277-8-49
AGGGGGGGTTGGAACCCCGGAAAACCAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGAAAAGGAACCGGAAAAAAAAAACCGG
1._GC-01-52-3-7
GGAAAAGGAACCGGAAAAAAAAAACCGG
2._SIC_1_Fld#_51_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
3._GC-08-90-2-13
GGAAAAGGAACCGGAAAAAAAAAACCGG
4._GC-01-56-3-11
GGAAAAGGAACCGGAAAAAAAAAACCGG
5._GC-01-39-2-16
GGAAAAGGAACCGGAAAAAAAAAACCGG
6._RUQ_436
GGAAAAGGAACCGGAAAAAAAAAACCGG
7._RUQ_44
GGAAAAGGAACCGGAAAAAAAAAACCGG
8._MITC-000366
GGAAAAGGAACCGGAAAAAAAAAACCGG
9._MITC-000412
GGAAAAGGAACCGGAAAAAAAAAACCGG
10._MITC-000717
GGAAAAGGAACCGGAAAAAAAAAACCGG
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
12._CC_37_Fld#_69B_Plt#_4
GGAAAAGGAACCGGAAAAACAAAACCGG
13._SIAL_42_Fld#_146_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
14._SIAL_98_Fld#_84_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
15._SIC_7_Fld#_68_Plt#_6
GGAAAAGGAACCGGAAAAACAAAACCGG
16._GC-08-71-1-93
GGAAAAGGAACCGGAAAAAAAAAACCGG
17._GC-08-63-1-85
GGAAAAGGAACCGGAAAAACAAAACCGG
18._SIC_2_Fld#_120_Plt#_6
GGAAAAGGAACCGGAAAAAAAAAACCGG
19._GC-08-109-3-8
GGAAAAGGAACCGGAAAAAAAAAACCGG
20._GC-01-118-6-15
GGAAAAGGAACCGGAAAAAAAAAACCGG
21._GC-01-48-3-3
GGAAAAGGAACCGGAAAAACAAAACCGG
22._RUQ_1715
GGGGAAGGAACCGGAAAAAAAAAACCGG
23._MITC-000114
GGGGAAGGAACCGGAAAAAAAAAACCGG
24._GC-08-254-8-22
GGAAAAGGAACCGGAAAAAAAAAACCGG
25._GC-01-41-2-18
GGAAAAGGAACCGGAAAAACAAAACCGG
26._RUQ_1159
GGAAAAGGAACCGGAGAAAAAAAACCAG
27._ROUND_LEAF_Fld#_203_Plt#_1
GGAAAAGGAACCGGAAAAAAAAAACCGG
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGAAAAGGAACCGGAAAAAAAAAACCGG
29._SIAL_44_Fld#_66_Plt#_5
GGAAAAGGAACCGGAAAAAAAAAACCGG
30._RUQ_1535
GGAAAAGGAACCGGAAAAAAAAAACCGG
31._RUQ_553
GGAAAAGGAACCGGAAAAAAAAAACCGG
32._RUQ_1694
GGAAAAGGAACCGGAAAAACAAAACCGG
33._RUQ_557
GGGGAAGGAACCGGAAAAAAAAAACCGG
34._NACIONAL_Fld#_189_Plt#_5
GGGGAAGGAACCGGAAAAAAAACCCCGG
35._GC-08-277-8-49
GGAAAAGGAACCGGAAAAAAAAAACCGG
 71 72 73 74 75 76 77 78 79 80 81    
_Input profile
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
1._GC-01-52-3-7
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
2._SIC_1_Fld#_51_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
3._GC-08-90-2-13
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
4._GC-01-56-3-11
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
5._GC-01-39-2-16
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
6._RUQ_436
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
7._RUQ_44
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
8._MITC-000366
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
9._MITC-000412
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
10._MITC-000717
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
11._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
12._CC_37_Fld#_69B_Plt#_4
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
13._SIAL_42_Fld#_146_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
14._SIAL_98_Fld#_84_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
15._SIC_7_Fld#_68_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
16._GC-08-71-1-93
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
17._GC-08-63-1-85
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
18._SIC_2_Fld#_120_Plt#_6
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
19._GC-08-109-3-8
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
20._GC-01-118-6-15
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
21._GC-01-48-3-3
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
22._RUQ_1715
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
23._MITC-000114
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
24._GC-08-254-8-22
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
25._GC-01-41-2-18
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
26._RUQ_1159
CCGGGGAAACAAGGAGAAAAGGX_XX_XX_X
27._ROUND_LEAF_Fld#_203_Plt#_1
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
28._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
29._SIAL_44_Fld#_66_Plt#_5
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
30._RUQ_1535
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
31._RUQ_553
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
32._RUQ_1694
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
33._RUQ_557
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
34._NACIONAL_Fld#_189_Plt#_5
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
35._GC-08-277-8-49
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X

Input profile: SIC_628 GC-06-15-1-15

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._SIAL_88 GC-01-52-3-7

98.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._SIC_1 SIC_1_Fld#_51_Plt#_5

96.3 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

3._BE_10 GC-08-90-2-13

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

4._GU_207 GC-01-56-3-11

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

5._SIAL_70 GC-01-39-2-16

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._B_12_/2_[POU] RUQ_436

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

7._SC_9_[UNK] RUQ_44

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

8._AMELONADO_[VAR] MITC-000366

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

9._LCT_EEN_46 MITC-000412

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

10._UF_273 MITC-000717

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

11._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

95.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

12._CC_37 CC_37_Fld#_69B_Plt#_4

95.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

13._SIAL_42 SIAL_42_Fld#_146_Plt#_6

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

14._SIAL_98 SIAL_98_Fld#_84_Plt#_5

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

15._SIC_7 SIC_7_Fld#_68_Plt#_6

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

16._JA_9_/37_[POU] GC-08-71-1-93

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_300 GC-08-63-1-85

94.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._SIC_2 SIC_2_Fld#_120_Plt#_6

94.4 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

19._CATONGO_1 GC-08-109-3-8

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

20._POUND_5_/C GC-01-118-6-15

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

21._SIAL_505 GC-01-48-3-3

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

22._MATINA_1_/6 RUQ_1715

93.8 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

23._MATINA_1_/6 MITC-000114

93.8 %
81 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

24._EEG_27 GC-08-254-8-22

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._SIAL_169 GC-01-41-2-18

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

26._N_38_[T38] RUQ_1159

92.6 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

27._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

92.6 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

28._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

92.6 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

29._SIAL_44 SIAL_44_Fld#_66_Plt#_5

92 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

30._FSC_13 RUQ_1535

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

31._GDL_3 RUQ_553

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._BE_8 RUQ_1694

90.7 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._MAR_9 RUQ_557

90.7 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._NACIONAL NACIONAL_Fld#_189_Plt#_5

90.7 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

35._CATONGO_1 GC-08-277-8-49

90.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP316 39TcSNP32 40TcSNP329
41TcSNP364 42TcSNP372 43TcSNP413 44TcSNP418 45TcSNP42
46TcSNP429 47TcSNP430 48TcSNP448 49TcSNP497 50TcSNP521
51TcSNP529 52TcSNP547 53TcSNP560 54TcSNP561 55TcSNP577
56TcSNP591 57TcSNP60 58TcSNP602 59TcSNP619 60TcSNP653
61TcSNP689 62TcSNP723 63TcSNP731 64TcSNP75 65TcSNP751
66TcSNP776 67TcSNP799 68TcSNP823 69TcSNP836 70TcSNP860
71TcSNP872 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP90
76TcSNP917 77TcSNP929 78TcSNP944 79TcSNP953 80TcSNP994
81TcSNP998