SNP Profiles matching EET 64 [ECU]

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AC	AC	AG	AC	AA	GG	AG	AC	AT	AG	AG	AG	AA	AC
1._RUQ_791	AC	AC	AG	AA	AA	GG	AG	AC	AT	AG	AG	AG	AA	AC
2._EET_54_[ECU]_Fld#_139_Plt#_5	AC	AC	AG	AA	AA	GG	AG	AC	AT	AG	AG	AG	AA	AC
3._EET_67_[ECU]_Fld#_67_Plt#_5	AC	AC	AG	AA	AA	GG	AG	AC	AT	AG	AG	AG	AA	AC
4._EET_103_[ECU]_Fld#_124_Plt#_6	AC	CC	AG	AC	AA	GG	AG	CC	AT	AG	AG	AG	AA	AC
5._RUQ_1539	AC	AC	AG	AC	AA	GG	AG	CC	AT	AG	AG	AG	AG	AC
6._UF_666_Fld#_71_Plt#_5	AC	AC	AG	AC	AA	GG	AG	CC	AT	AG	AG	AG	AA	AC
7._UF_705_Fld#_76_Plt#_5	AC	AC	AG	AC	AA	GG	AG	CC	AT	AG	AG	AG	AA	AC
8._RUQ_352	AA	AC	AG	AA	AA	GG	AG	CC	AT	AG	AG	AG	AA	AC
9._RUQ_456	AC	AC	AG	AC	AA	GG	AG	AC	AT	AG	AG	AG	AG	AC
10._SCR_2_Fld#_112_Plt#_2	AC	AC	AG	AC	AA	GG	AG	CC	AA	AG	AG	AG	AA	AC
11._UF_36_Fld#_106_Plt#_5	AC	AC	AG	AA	AA	GG	AG	CC	AT	AG	GG	AG	AA	AC
12._EET_75_[ECU]_Fld#_37_Plt#_5	AC	AC	AG	AC	AA	GG	AG	AC	AA	AG	AG	AG	AA	AC
13._UF_29_Fld#_20_Plt#_5	AC	AC	AG	AC	AA	GG	AG	CC	AT	AG	AG	AG	AA	AC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
1._RUQ_791	AG	AC	AG	AG	AC	GG	AG	GG	CC	AG	CG	AG	AC	AG
2._EET_54_[ECU]_Fld#_139_Plt#_5	AG	AC	AG	AA	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
3._EET_67_[ECU]_Fld#_67_Plt#_5	AG	AC	AG	AA	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
4._EET_103_[ECU]_Fld#_124_Plt#_6	AG	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
5._RUQ_1539	AG	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
6._UF_666_Fld#_71_Plt#_5	AA	AC	AG	AA	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
7._UF_705_Fld#_76_Plt#_5	AA	AC	AG	AA	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
8._RUQ_352	AG	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
9._RUQ_456	AG	AC	GG	AA	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
10._SCR_2_Fld#_112_Plt#_2	AA	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	AC	AG
11._UF_36_Fld#_106_Plt#_5	AG	AC	AG	AG	AC	GG	AG	AG	CC	AG	CG	AG	CC	AG
12._EET_75_[ECU]_Fld#_37_Plt#_5	AG	AA	GG	AG	AC	GG	AG	GG	CC	AG	CG	AG	AC	AG
13._UF_29_Fld#_20_Plt#_5	AA	AC	AG	AA	__	GG	AG	AG	CC	AG	CG	AG	AC	AG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AG	TT	GG	AC	CG	AA	GG	GG	CG	CC	AT	AT	GG	GG
1._RUQ_791	AG	TT	GG	CC	CG	AA	GG	GG	CG	CC	AT	AT	GG	GG
2._EET_54_[ECU]_Fld#_139_Plt#_5	AG	TT	GG	AC	CG	AA	GG	GG	CG	CC	AT	AT	GG	AG
3._EET_67_[ECU]_Fld#_67_Plt#_5	AG	TT	GG	AC	CG	AA	GG	GG	CG	CC	AT	AT	GG	AG
4._EET_103_[ECU]_Fld#_124_Plt#_6	AG	AT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	GG	GG
5._RUQ_1539	AG	TT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	AG	AG
6._UF_666_Fld#_71_Plt#_5	AG	AT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	GG	GG
7._UF_705_Fld#_76_Plt#_5	AG	AT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	GG	GG
8._RUQ_352	AG	TT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	AG	GG
9._RUQ_456	AG	TT	GG	AC	CG	AA	GG	GG	CG	CC	AT	AT	GG	GG
10._SCR_2_Fld#_112_Plt#_2	AG	TT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	GG	AG
11._UF_36_Fld#_106_Plt#_5	AG	AT	AG	AC	GG	AA	GG	AG	CG	CC	AT	AT	GG	GG
12._EET_75_[ECU]_Fld#_37_Plt#_5	AG	TT	GG	CC	GG	AA	GG	GG	CG	CC	AT	AT	AG	GG
13._UF_29_Fld#_20_Plt#_5	AG	AT	GG	AC	GG	AA	GG	GG	CG	CC	AT	AT	GG	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AT	AG	AG	AG	GG	AA	GG	AG	AC	AC	AG	AC	AG	CG
1._RUQ_791	AT	AG	AA	AG	GG	AA	GG	AG	AC	AC	AG	AC	AG	CG
2._EET_54_[ECU]_Fld#_139_Plt#_5	AT	AG	AA	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
3._EET_67_[ECU]_Fld#_67_Plt#_5	AT	AG	AA	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
4._EET_103_[ECU]_Fld#_124_Plt#_6	AT	AG	AG	AG	GG	AA	GG	AG	AC	AC	AG	AC	AG	CG
5._RUQ_1539	AT	AG	AG	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
6._UF_666_Fld#_71_Plt#_5	AT	AG	AG	AG	AG	AT	GG	AG	AC	AC	AG	AC	AG	CG
7._UF_705_Fld#_76_Plt#_5	AT	AG	AG	AG	AG	AT	GG	AG	AC	AC	AG	AC	AG	CG
8._RUQ_352	AT	AG	AG	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
9._RUQ_456	AT	AA	AA	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
10._SCR_2_Fld#_112_Plt#_2	AT	AG	AG	AG	AG	AT	GG	AG	AC	AC	AG	AC	AG	CG
11._UF_36_Fld#_106_Plt#_5	AT	AG	AG	AG	AG	AA	GG	AG	AC	AC	AG	AC	AG	CG
12._EET_75_[ECU]_Fld#_37_Plt#_5	AT	AG	AG	GG	AG	AA	GG	AG	AC	AC	AG	AC	AA	CG
13._UF_29_Fld#_20_Plt#_5	AT	AG	AG	AG	AG	AT	GG	AG	AC	AC	AG	AC	AG	CG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	CC	GG	AG	AA	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
1._RUQ_791	CC	GG	AG	AA	AA	AA	CC	AG	AA	AA	AA	AA	AC	CG
2._EET_54_[ECU]_Fld#_139_Plt#_5	CC	GG	AG	AA	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
3._EET_67_[ECU]_Fld#_67_Plt#_5	CC	GG	AG	AA	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
4._EET_103_[ECU]_Fld#_124_Plt#_6	CC	GG	GG	AA	AG	AA	AC	AG	AA	AA	AA	AA	CC	CG
5._RUQ_1539	CC	GG	AG	AA	AG	AA	AC	AG	AA	AA	AA	AA	AC	CG
6._UF_666_Fld#_71_Plt#_5	AC	GG	GG	AA	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
7._UF_705_Fld#_76_Plt#_5	AC	GG	GG	AA	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
8._RUQ_352	CC	GG	AG	AG	AG	AG	CC	AG	AA	AA	AA	AA	CC	CG
9._RUQ_456	CC	GG	AG	AA	AA	AA	CC	AG	AA	AA	AA	AA	CC	CC
10._SCR_2_Fld#_112_Plt#_2	AC	GG	GG	AG	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG
11._UF_36_Fld#_106_Plt#_5	CC	GG	AG	AA	AG	AA	AC	AG	AA	AA	AA	AA	AC	CG
12._EET_75_[ECU]_Fld#_37_Plt#_5	CC	GG	AA	AA	AG	AA	CC	AG	AG	AA	AA	AA	CC	CG
13._UF_29_Fld#_20_Plt#_5	AC	GG	GG	AG	AG	AA	CC	AG	AA	AA	AA	AA	AC	CG

	71	72	73	74	75	76	77	78	79	80	81	82
_Input profile	AG	CC	AG	CG	AG	AC	AG	GG	AG	AT	AA	AG	X_X	X_X
1._RUQ_791	AG	CC	AG	CG	AG	AC	AG	GG	AG	AT	AA	AG	X_X	X_X
2._EET_54_[ECU]_Fld#_139_Plt#_5	AG	CC	AG	CG	AG	AC	AG	GG	AG	AT	AA	AG	X_X	X_X
3._EET_67_[ECU]_Fld#_67_Plt#_5	AG	CC	AG	CG	AG	AC	AG	GG	AG	AT	AA	AG	X_X	X_X
4._EET_103_[ECU]_Fld#_124_Plt#_6	AG	CC	AG	CG	AG	CC	AA	GG	AG	AT	AA	AG	X_X	X_X
5._RUQ_1539	AA	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X
6._UF_666_Fld#_71_Plt#_5	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X
7._UF_705_Fld#_76_Plt#_5	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X
8._RUQ_352	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AA	X_X	X_X
9._RUQ_456	AG	CC	AG	CG	AG	AC	AA	GG	GG	AT	AA	AA	X_X	X_X
10._SCR_2_Fld#_112_Plt#_2	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X
11._UF_36_Fld#_106_Plt#_5	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X
12._EET_75_[ECU]_Fld#_37_Plt#_5	AG	CC	AG	CG	AG	AC	AG	GG	AG	AT	AA	AG	X_X	X_X
13._UF_29_Fld#_20_Plt#_5	AG	CC	AG	CG	AG	CC	AG	GG	GG	AT	AA	AG	X_X	X_X

Input profile: EET_64_[ECU] EET_64_[ECU]_Fld#_34_Plt#_6

USDA-TARS, United States of America

Location: Field: 34, Tree: 6

Notes: TARS_Cacao_collection

1._EET_59_[ECU] RUQ_791

97 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

2._EET_54_[ECU] EET_54_[ECU]_Fld#_139_Plt#_5

97 %
82 shared markers

USDA-TARS, United States of America

Location: Field: 139, Tree: 5

Notes: TARS_Cacao_collection

3._EET_67_[ECU] EET_67_[ECU]_Fld#_67_Plt#_5

97 %
82 shared markers

USDA-TARS, United States of America

Location: Field: 67, Tree: 5

Notes: TARS_Cacao_collection

4._EET_103_[ECU] EET_103_[ECU]_Fld#_124_Plt#_6

94.5 %
82 shared markers

USDA-TARS, United States of America

Location: Field: 124, Tree: 6

Notes: TARS_Cacao_collection

5._JA_5_/5_[POU] RUQ_1539

93.9 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

6._UF_666 UF_666_Fld#_71_Plt#_5

93.3 %
82 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 71, Tree: 5

Notes: TARS_Cacao_collection

7._UF_705 UF_705_Fld#_76_Plt#_5

93.3 %
82 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 76, Tree: 5

Notes: TARS_Cacao_collection

8._JA_1_/19_[POU] RUQ_352

92.7 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

9._JA_10_/12_[POU] RUQ_456

92.7 %
82 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

10._SCR_2 SCR_2_Fld#_112_Plt#_2

92.7 %
82 shared markers

USDA-TARS, United States of America

Location: Field: 112, Tree: 2

11._UF_36 UF_36_Fld#_106_Plt#_5

92.7 %
82 shared markers

USDA-TARS, United States of America

Location: Field: 106, Tree: 5

Notes: TARS_Cacao_collection

12._EET_75_[ECU] EET_75_[ECU]_Fld#_37_Plt#_5

92.1 %
82 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 37, Tree: 5

Notes: TARS_Cacao_collection

13._UF_29 UF_29_Fld#_20_Plt#_5

92 %
81 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 20, Tree: 5

Notes: TARS_Cacao_collection

Key to SNP Markers

Key to SNP Markers

1	Tcm001s00947643	2	Tcm003s01336581	3	Tcm003s07402719	4	Tcm006s26664133	5	TcSNP1034
6	TcSNP1060	7	TcSNP1062	8	TcSNP1063	9	TcSNP1075	10	TcSNP1096
11	TcSNP1111	12	TcSNP1149	13	TcSNP1156	14	TcSNP1175	15	TcSNP122
16	TcSNP1253	17	TcSNP1270	18	TcSNP1309	19	TcSNP1350	20	TcSNP1383
21	TcSNP1414	22	TcSNP1439	23	TcSNP144	24	TcSNP1442	25	TcSNP1458
26	TcSNP1484	27	TcSNP150	28	TcSNP151	29	TcSNP1520	30	TcSNP154
31	TcSNP174	32	TcSNP193	33	TcSNP226	34	TcSNP230	35	TcSNP240
36	TcSNP242	37	TcSNP25	38	TcSNP28	39	TcSNP316	40	TcSNP32
41	TcSNP329	42	TcSNP364	43	TcSNP372	44	TcSNP413	45	TcSNP418
46	TcSNP42	47	TcSNP429	48	TcSNP430	49	TcSNP448	50	TcSNP497
51	TcSNP521	52	TcSNP529	53	TcSNP547	54	TcSNP560	55	TcSNP561
56	TcSNP577	57	TcSNP591	58	TcSNP60	59	TcSNP602	60	TcSNP619
61	TcSNP653	62	TcSNP689	63	TcSNP723	64	TcSNP731	65	TcSNP75
66	TcSNP751	67	TcSNP776	68	TcSNP799	69	TcSNP823	70	TcSNP836
71	TcSNP860	72	TcSNP872	73	TcSNP891	74	TcSNP894	75	TcSNP899
76	TcSNP90	77	TcSNP917	78	TcSNP929	79	TcSNP944	80	TcSNP953
81	TcSNP994	82	TcSNP998