SNP Profiles matching CC 37

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGGGAAAACC
1._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
2._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
12._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
13._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
14._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
15._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
16._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
17._RUQ_1159
CCCCAAAAAAGGAAACAAGGGGAAAACC
18._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
19._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
20._RUQ_1726
CCACAAAAAAGGAACCAAGGAGAAAAAC
21._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
22._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
23._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
24._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
25._SIAL_98_Fld#_84_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAACC
26._SIAL_44_Fld#_66_Plt#_5
CCCCAAAAAAGGAACCAAGGAAAAAAAC
27._RUQ_1694
CCAAAAACAAGGAACCAAGGAAAAAACC
28._GC-01-118-6-15
CCAAAAAAAAGGAACCAAGGAAAAGGCC
29._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
30._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
31._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
33._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
34._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGAAGGAAACGGAAAAACGGCCAAAAGG
1._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
2._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
12._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
14._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
15._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
16._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
17._RUQ_1159
AAAAGGAAAAGGAAAAACGGCCAAAAGG
18._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
19._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
20._RUQ_1726
AAAAAGAAACGGAAAACCGGCCAAAAGG
21._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
22._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
23._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
24._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
25._SIAL_98_Fld#_84_Plt#_5
AAAAAAAAAAGGAAAACCGGCCAAAAGG
26._SIAL_44_Fld#_66_Plt#_5
AAAAAGAAACGGAAAACCAGCCAGAAGG
27._RUQ_1694
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
28._GC-01-118-6-15
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
29._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
30._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
31._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
33._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
34._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
2._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
9._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
11._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
14._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
15._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
16._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._RUQ_1159
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._RUQ_1726
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
24._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._SIAL_98_Fld#_84_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._SIAL_44_Fld#_66_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
27._RUQ_1694
AATTGGAAGGAGGGGGGGCCTTATGGGG
28._GC-01-118-6-15
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
31._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
33._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
34._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAGGGGGGGTTGGAACCCCGGAAAACC
1._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
2._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
10._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
13._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
14._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
15._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
16._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
17._RUQ_1159
AAAAGGGGGGATGGAACCCCGGAAAACC
18._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
19._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
20._RUQ_1726
AAAGGGGGGGATGGAACCCCGGAAAACG
21._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
22._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
23._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
24._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
25._SIAL_98_Fld#_84_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
26._SIAL_44_Fld#_66_Plt#_5
AAAAGGGGGGTTGGAGCCCCGGAAAACG
27._RUQ_1694
AAAAGGGGGGTTGGAGCCCCGGAAAACC
28._GC-01-118-6-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
29._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
30._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
31._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
33._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
34._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
ACGGAAAAGGAACCGGAAAAACAAAACC
1._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
2._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
10._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
12._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
13._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
14._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
15._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
16._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
17._RUQ_1159
ACGGAAAAGGAACCGGAGAAAAAAAACC
18._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
19._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
20._RUQ_1726
AAGGAAAAAGAAACGGAAAAACAAAACC
21._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
22._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
23._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
24._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
25._SIAL_98_Fld#_84_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
26._SIAL_44_Fld#_66_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
27._RUQ_1694
AAGGAAAAGGAACCGGAAAAACAAAACC
28._GC-01-118-6-15
AAGGAAAAGGAACCGGAAAAAAAAAACC
29._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
30._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
31._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
33._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
34._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
14._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
15._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._RUQ_1159
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
18._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
19._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._RUQ_1726
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
22._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
23._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
24._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._SIAL_98_Fld#_84_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
26._SIAL_44_Fld#_66_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
27._RUQ_1694
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._GC-01-118-6-15
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
29._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
30._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
31._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
32._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
34._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X

Input profile: CC_37 CC_37_Fld#_69B_Plt#_4

 
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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4