| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | CC | AA | GG | TT | AA | CC | CC | GG | CC | AA | AG | TT | CC |
1._RUQ_178 | CT | CC | AA | GG | TT | AA | CC | CC | GG | CC | AA | AG | TT | CC |
2._LCT_EEN_232 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
3._LCT_EEN_52 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
4._RUQ_180 | __ | CC | AC | GG | TT | AA | CC | CC | AG | CC | AA | AG | TT | CC |
5._LCT_EEN_107 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
6._LCT_EEN_109_/S-102 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
7._LCT_EEN_163_/D | __ | __ | AC | GG | TT | __ | CC | __ | AG | CC | __ | __ | TT | __ |
8._LCT_EEN_223 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
9._LCT_EEN_283 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
10._LCT_EEN_44_/S-9 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
11._LCT_EEN_49 | __ | __ | AC | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
12._LCT_EEN_65 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
13._LCT_EEN_142 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
14._LCT_EEN_221 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
15._LCT_EEN_146 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
16._LCT_EEN_227 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
17._LCT_EEN_217 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
18._LCT_EEN_231 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
19._LCT_EEN_282 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
20._LCT_EEN_282 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
21._LCT_EEN_327 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
22._LCT_EEN_378 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
23._RUQ_102 | CC | CC | AC | GG | TT | AA | CC | __ | GG | CC | AA | GG | TT | CC |
24._RUQ_1547 | __ | CC | AC | GG | TT | AA | CC | __ | GG | CC | AG | AA | TT | CC |
25._LCT_EEN_121 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
26._LCT_EEN_141 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
27._LCT_EEN_220 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
28._LCT_EEN_32 | __ | __ | AA | GG | TT | __ | CC | __ | AG | CC | __ | __ | TT | __ |
29._LCT_EEN_37 | __ | __ | AC | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
30._LCT_EEN_38 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
31._LCT_EEN_46 | __ | __ | __ | GG | TT | __ | CC | CC | AG | CC | __ | __ | AT | __ |
32._LCT_EEN_218 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
33._LCT_EEN_219 | __ | __ | AA | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
34._LCT_EEN_376 | __ | __ | CC | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
35._LCT_EEN_379 | __ | __ | CC | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
36._LCT_EEN_57 | __ | __ | AC | GG | TT | __ | CC | __ | GG | CC | __ | __ | TT | __ |
| 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | GG | AA | CC | GG | GG | CC | CC | TT | CC | TT | AA | TT | CC | CC |
1._RUQ_178 | GG | AA | CC | GG | GG | CC | CC | TT | CC | TT | AA | TT | CC | CC |
2._LCT_EEN_232 | GG | AC | CC | GG | GG | CC | __ | TT | __ | TT | __ | __ | __ | CC |
3._LCT_EEN_52 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
4._RUQ_180 | GG | AA | CC | GG | GG | CC | CC | TT | CC | TT | AA | TT | CC | CC |
5._LCT_EEN_107 | GG | AC | CC | GG | CG | CC | __ | TT | __ | TT | __ | __ | __ | CC |
6._LCT_EEN_109_/S-102 | GG | AA | CC | GG | CG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
7._LCT_EEN_163_/D | GG | AA | CC | GG | GG | CC | __ | TT | __ | TT | __ | __ | __ | CC |
8._LCT_EEN_223 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
9._LCT_EEN_283 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
10._LCT_EEN_44_/S-9 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
11._LCT_EEN_49 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
12._LCT_EEN_65 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
13._LCT_EEN_142 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
14._LCT_EEN_221 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
15._LCT_EEN_146 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
16._LCT_EEN_227 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
17._LCT_EEN_217 | GG | AA | CC | GG | CG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
18._LCT_EEN_231 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
19._LCT_EEN_282 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
20._LCT_EEN_282 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
21._LCT_EEN_327 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
22._LCT_EEN_378 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
23._RUQ_102 | GG | AA | CC | GG | GG | CC | CC | TT | CC | GT | AA | TT | CC | CC |
24._RUQ_1547 | GG | AA | CC | GG | GG | CC | CC | TT | CC | GG | AA | TT | CC | CC |
25._LCT_EEN_121 | GG | AC | CC | GG | CG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
26._LCT_EEN_141 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
27._LCT_EEN_220 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
28._LCT_EEN_32 | GG | AA | CC | GG | GG | CC | __ | CT | __ | TT | __ | __ | __ | CC |
29._LCT_EEN_37 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
30._LCT_EEN_38 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
31._LCT_EEN_46 | AG | AA | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
32._LCT_EEN_218 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
33._LCT_EEN_219 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GT | __ | __ | __ | CC |
34._LCT_EEN_376 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
35._LCT_EEN_379 | GG | AA | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
36._LCT_EEN_57 | GG | AC | CC | GG | GG | CC | __ | TT | __ | GG | __ | __ | __ | CC |
| 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CC | TT | AA | CC | CC | GG | GG | TT | GG | CC | CC | TT | CC | GG |
1._RUQ_178 | CC | TT | AA | CC | CC | GG | GG | TT | GG | CC | CC | TT | CC | GG |
2._LCT_EEN_232 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
3._LCT_EEN_52 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
4._RUQ_180 | CC | TT | AA | CC | CC | GG | GG | TT | GG | CT | CC | TT | CC | GG |
5._LCT_EEN_107 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
6._LCT_EEN_109_/S-102 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
7._LCT_EEN_163_/D | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
8._LCT_EEN_223 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
9._LCT_EEN_283 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
10._LCT_EEN_44_/S-9 | CG | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
11._LCT_EEN_49 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
12._LCT_EEN_65 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
13._LCT_EEN_142 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
14._LCT_EEN_221 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
15._LCT_EEN_146 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
16._LCT_EEN_227 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
17._LCT_EEN_217 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
18._LCT_EEN_231 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
19._LCT_EEN_282 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
20._LCT_EEN_282 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
21._LCT_EEN_327 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
22._LCT_EEN_378 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
23._RUQ_102 | GG | TT | AA | CC | CC | GG | GG | TT | GG | CC | CC | TT | CC | GG |
24._RUQ_1547 | CC | TT | AA | CC | CC | GG | GG | TT | GG | CC | CC | CT | CC | GG |
25._LCT_EEN_121 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
26._LCT_EEN_141 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
27._LCT_EEN_220 | CG | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
28._LCT_EEN_32 | GG | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
29._LCT_EEN_37 | GG | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
30._LCT_EEN_38 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CT | CC | GG |
31._LCT_EEN_46 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | GG |
32._LCT_EEN_218 | GG | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
33._LCT_EEN_219 | __ | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | CC | CC | GG |
34._LCT_EEN_376 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
35._LCT_EEN_379 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
36._LCT_EEN_57 | CC | TT | AA | __ | CC | __ | __ | __ | GG | __ | __ | TT | CC | __ |
| 1 | TcSNP75 | 2 | TcSNP90 | 3 | TcSNP144 | 4 | TcSNP150 | 5 | TcSNP151 |
| 6 | TcSNP174 | 7 | TcSNP193 | 8 | TcSNP226 | 9 | TcSNP230 | 10 | TcSNP242 |
| 11 | TcSNP329 | 12 | TcSNP364 | 13 | TcSNP372 | 14 | TcSNP448 | 15 | TcSNP469 |
| 16 | TcSNP529 | 17 | TcSNP534 | 18 | TcSNP560 | 19 | TcSNP577 | 20 | TcSNP591 |
| 21 | TcSNP602 | 22 | TcSNP619 | 23 | TcSNP702 | 24 | TcSNP723 | 25 | TcSNP731 |
| 26 | TcSNP799 | 27 | TcSNP823 | 28 | TcSNP872 | 29 | TcSNP878 | 30 | TcSNP891 |
| 31 | TcSNP998 | 32 | TcSNP999 | 33 | TcSNP1060 | 34 | TcSNP1063 | 35 | TcSNP1111 |
| 36 | TcSNP1126 | 37 | TcSNP1253 | 38 | TcSNP1309 | 39 | TcSNP1439 | 40 | TcSNP1442 |
| 41 | TcSNP1458 | 42 | TcSNP1484 |