SNP Profiles matching LCT EEN 57

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 Key

 1234567891011121314
_Input profile
GGAAACGGTTCCGGCCTTAAGGACCCGG
1._LCT_EEN_283
GGAAAAGGTTCCGGCCTTAAGGACCCGG
2._LCT_EEN_282
GGAAAAGGTTCCGGCCTTAAGGACCCGG
3._LCT_EEN_282
GGAAAAGGTTCCGGCCTTAAGGACCCGG
4._LCT_EEN_49
GGAAACGGTTCCGGCCTTAAGGAACCGG
5._RUQ_1547
__ACGGTTCCGGCCTT_GGAACCGG
6._LCT_EEN_376
GGAACCGGTTCCGGCCTTAAGGAACCGG
7._LCT_EEN_379
GGAACCGGTTCCGGCCTTAAGGAACCGG
8._LCT_EEN_223
GGAAAAGGTTCCGGCCTTAAGGAACCGG
9._LCT_EEN_327
GGAAAAGGTTCCGGCCTTAAGGACCCGG
10._LCT_EEN_146
GGAAAAGGTTCCGGCCTTAAGGACCCGG
11._LCT_EEN_378
GGAAAAGGTTCCGGCCTTAAGGACCCGG
12._LCT_EEN_217
GGAAAAGGTTCCGGCCTTAAGGAACCGG
13._LCT_EEN_141
GGAAAAGGTTCCGGCCTTAAGGACCCGG
14._LCT_EEN_38
GGAAAAGGTTCCGGCCTTAAGGACCCGG
15._LCT_EEN_65
GGAAAAGGTTCCGGCCTTAAGGACCCGG
16._LCT_EEN_234
GGAAAA-TTCCGGCCTT--CCCCGG
17._LCT_EEN_221
GGAAAAGGTTCCGGCCTTAAGGAACCGG
18._LCT_EEN_231
GGAAAAGGTTCCGGCCTTAGGGAACCGG
19._RUQ_1548
__AAGGTTCCGGCCTT_GGACCCGG
20._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
21._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
22._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
23._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
24._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
25._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
26._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
27._LCT_EEN_280
GGAAACGGTTCCAGCCTTAAGGAACCGG
28._LCT_EEN_109_/S-102
GGAAAAGGTTCCGGCCTTAAGGAACCGG
29._LCT_EEN_37
GGAAACGGTTCCGGCCTTAAGGAACCGG
30._LCT_EEN_52
GGAAAAGGTTCCGGCCTTAAGGAACCGG
31._LCT_EEN_321_/S-1
GGAAACGGTTCCGGCCTTAAGGACCCGG
32._LCT_EEN_163_/D
GGAAACGGTTCCAGCCTTAAGGAACCGG
33._LCT_EEN_220
GGAAAAGGTTCCGGCCTTAAGGAACCGG
34._LCT_EEN_253
GGAAACGGTTCCGGCCTTAAGGACCCGG
35._LCT_EEN_142
GGAAAAGGTTCCGGCCTTAAGGAACCGG
36._LCT_EEN_264
CGAACCGGTTCCGGCTTTAAGGACCCGG
37._LCT_EEN_30
GGAAACGGTTCCAGCCTTAAGGCCCCGG
38._LCT_EEN_44_/S-9
GGAAAAGGTTCCGGCCTTAAGGAACCGG
39._LCT_EEN_63
GGAAAAGGTTCCGGCCTTAAGGACCCGG
40._RUQ_1559
__ACGGTTCCGGCCTT_GGCCCCGG
41._RUQ_1600
__AAGGTTCCGGCCTT_GGAACCGG
42._RUQ_102
__ACGGTTCCGGCCTT_GGAACCGG
43._RUQ_178
__AAGGTTCCGGCCTT_GGAACCGG
44._RUQ_180
__ACGGTTCCAGCCTT_GGAACCGG
45._RUQ_687
__AAGGTTCCGGCCTT_GGCCCCGG
46._LCT_EEN_241
_AAAAGGTTCCAGCC_AAGGACCCGG
47._LCT_EEN_218
GGAAAAGGTTCCGGCCTTAAGGAACCGG
48._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
49._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
50._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
51._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
52._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
53._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
54._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
55._GC-08-070-1-92
GGAAACGGTTCCAGCCTTAAGGAACCGG
56._LCT_EEN_232
GGAAAAGGTTCCGGCCTTAAGGACCCGG
57._LCT_EEN_250
GGAAACGGTTCCGGCCTTAGGGCCCCGG
58._LCT_EEN_219
CGAAAAGGTTCCGGCCTTAAGGACCCGG
59._LCT_EEN_278
CGAAACGGTTCCGGCCTTAAGGACCCGG
60._LCT_EEN_241
CCAAAAGGTTCCAGCCTTAAGGACCCGG
61._LCT_EEN_241
CCAAAAGGTTCCAGCCTTAAGGACCCGG
62._LCT_EEN_241
CCAAAAGGTTCCAGCCTTAAGGACCCGG
63._LCT_EEN_241
CCAAAAGGTTCCAGCCTTAAGGACCCGG
 1516171819202122232425262728
_Input profile
GGCCTTAAGGCCCCCCTTTTCGAACTAA
1._LCT_EEN_283
GGCCTTAAGTCCCCCCTTTTCCAACTAA
2._LCT_EEN_282
GGCCTTAAGGCCCC-TTTTCCAATTAA
3._LCT_EEN_282
GGCCTTAAGGCCCC-TTTTCCAATTAA
4._LCT_EEN_49
GGCCTTAAGTCCCCCCTTTTCCAACTAA
5._RUQ_1547
GGCCTT_GG_CCCCTT____AA
6._LCT_EEN_376
GGCCTTAAGGCCCCCCTTTTCGAATTAA
7._LCT_EEN_379
GGCCTTAAGGCCCCCCTTTTCGAATTAA
8._LCT_EEN_223
GGCCTTAGGGCCCCCCTTTTCCAACTAA
9._LCT_EEN_327
GGCCTTAAGGCCCC-TTTTCCAATTAA
10._LCT_EEN_146
GGCCTTAAGGCCCCCCTTTTCCATTTAA
11._LCT_EEN_378
GGCCTTAAGGCCCC-TTTTCGATTTAA
12._LCT_EEN_217
CGCCTTAAGGCCCC-TTTTCCAACTAA
13._LCT_EEN_141
GGCCTTAAGGCCCCCCTTTTCCAATTAA
14._LCT_EEN_38
GGCCTTAAGGCCCCCCTTTTCCAATTAA
15._LCT_EEN_65
GGCCTTAAGTCCCCCCTTTTCCAATTAA
16._LCT_EEN_234
GGCCTTAAGGCC--TTTTCCAATTAA
17._LCT_EEN_221
GGCCTTAAGGCCCC-TTTTCCAACCAA
18._LCT_EEN_231
GGCCTTAAGGCCCC-TTTTCCAACTAA
19._RUQ_1548
-CCTT_GG_CCCGTT____AA
20._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
21._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
22._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
23._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
24._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
25._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
26._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
27._LCT_EEN_280
GGCCCT_GG_CG_TTTTCGAACTAA
28._LCT_EEN_109_/S-102
CGCCTTAAGTCCCCCCTTTTCGAATTAA
29._LCT_EEN_37
GGCCTTAAGTCCCCGGTTTTCGAATTAA
30._LCT_EEN_52
GGCCTTAAGTCCCCCCTTTTCCAATTAA
31._LCT_EEN_321_/S-1
GGCCCCAAGGCCCCCCTTTTCCATTTAA
32._LCT_EEN_163_/D
GGCCTTAATTCCCCCCTTTTCCAACTAA
33._LCT_EEN_220
GGCCTTAAGGCCCCCGTTTTCCAATTAA
34._LCT_EEN_253
CGCCCTAAGGCCCCCCTTTTCCTTCTAA
35._LCT_EEN_142
GGCCTTAAGTCCCC-TTTTCCAATTAA
36._LCT_EEN_264
GGCCCTAAGGCCCC-TTTTCCAACTAA
37._LCT_EEN_30
GGCCTTAAGGCCCCGGTTTTCCAATTAA
38._LCT_EEN_44_/S-9
GGCCTTAAGTCCCCCGTTTTCCAATTAA
39._LCT_EEN_63
GGCCTTGGGGCCCCGGTTTTCGAATTAA
40._RUQ_1559
GGCCTT_GG_CCGGTT____AA
41._RUQ_1600
GGCCTT_TT_CCCCTT____AA
42._RUQ_102
GGCCTT_GT_CCGGTT____AA
43._RUQ_178
GGCCTT_TT_CCCCTT____AA
44._RUQ_180
GGCCTT_TT_CCCCTT____AA
45._RUQ_687
GGCCTT_GG_CCGGTT____AA
46._LCT_EEN_241
GGCCTTAGGG_CG_TT_CGATCTAA
47._LCT_EEN_218
GGCCTTAAGGCCCCGGTTTTCCAATTAA
48._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
49._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
50._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
51._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
52._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
53._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
54._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
55._GC-08-070-1-92
GGCCCT_GGCCCGGGTTTTCGAACTAA
56._LCT_EEN_232
GGCCTTGGTTCCCCCCTTTTCCAATTAA
57._LCT_EEN_250
GGCCTTAAGGCCCCCCTTTTCCATCTAA
58._LCT_EEN_219
GGCCTTAAGTCCCC-TTTTCCAATTAA
59._LCT_EEN_278
GGCCTTAGGGCCCC-TTCTCCAACCAA
60._LCT_EEN_241
GGCCTT_GG_CG_TTTTCGATCTAA
61._LCT_EEN_241
GGCCTT_GG_CG_TTTTCGATCTAA
62._LCT_EEN_241
GGCCTT_GG_CG_TTTTCGATCTAA
63._LCT_EEN_241
GGCCTT_GG_CG_TTTTCGATCTAA
 2930313233343536373839   
_Input profile
CCGGCTTTGGTTAATTTTCCCCX_XX_XX_X
1._LCT_EEN_283
CCGG-TTGGTTAATTTTCCCCX_XX_XX_X
2._LCT_EEN_282
CCGG-TTGGTTAATTTTCCCCX_XX_XX_X
3._LCT_EEN_282
CCGG-TTGGTTAATTTTCC-X_XX_XX_X
4._LCT_EEN_49
CCGG-TTGG-AA-TTCC-X_XX_XX_X
5._RUQ_1547
CC___GG___CTCC_X_XX_XX_X
6._LCT_EEN_376
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
7._LCT_EEN_379
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
8._LCT_EEN_223
CCGG-TTGGTTAATTTTCCCCX_XX_XX_X
9._LCT_EEN_327
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
10._LCT_EEN_146
CCGG-TTGGTTAATTTTCC-X_XX_XX_X
11._LCT_EEN_378
CCGG-TTGGTTACTTTTCCCCX_XX_XX_X
12._LCT_EEN_217
CCGG-TTGGTTAATTTTCC-X_XX_XX_X
13._LCT_EEN_141
CCGG-TTGG-AA-CTCC-X_XX_XX_X
14._LCT_EEN_38
CCGG-TTGG-AA-CTCC-X_XX_XX_X
15._LCT_EEN_65
CCGG-TTGG-AA-TTCC-X_XX_XX_X
16._LCT_EEN_234
CCGG-TTGGTT-TTTTCCCCX_XX_XX_X
17._LCT_EEN_221
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
18._LCT_EEN_231
CCGG-TTGGTTAATTCTCCCCX_XX_XX_X
19._RUQ_1548
CC___GG___CTCC_X_XX_XX_X
20._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
21._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
22._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
23._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
24._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
25._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
26._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
27._LCT_EEN_280
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
28._LCT_EEN_109_/S-102
CCGG-TTGG-AA-TTCC-X_XX_XX_X
29._LCT_EEN_37
CCGG-TTGG-AA-TTCC-X_XX_XX_X
30._LCT_EEN_52
CCGG-TTGG-AA-TTCC-X_XX_XX_X
31._LCT_EEN_321_/S-1
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
32._LCT_EEN_163_/D
CCGG-TTGGTTACTTTTCCCCX_XX_XX_X
33._LCT_EEN_220
CCGG-TTGGTTAATTCTCCCCX_XX_XX_X
34._LCT_EEN_253
CCGG-TTGTTTAATTTTCCCCX_XX_XX_X
35._LCT_EEN_142
CCGG-TTGGTTAATTCTCC-X_XX_XX_X
36._LCT_EEN_264
CCGG-TTGGTTAACTTTCC-X_XX_XX_X
37._LCT_EEN_30
CCGG-TTGG-AA-TTCC-X_XX_XX_X
38._LCT_EEN_44_/S-9
CCGG-TTGG-AA-TTCC-X_XX_XX_X
39._LCT_EEN_63
CCGG-TTGG-AA-TTCC-X_XX_XX_X
40._RUQ_1559
CC___GG___CTCC_X_XX_XX_X
41._RUQ_1600
CC___GG___TTCC_X_XX_XX_X
42._RUQ_102
CC___GG___TTCC_X_XX_XX_X
43._RUQ_178
CC___GG___TTCC_X_XX_XX_X
44._RUQ_180
CC___GG___TTCC_X_XX_XX_X
45._RUQ_687
CC___GG___TTCC_X_XX_XX_X
46._LCT_EEN_241
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
47._LCT_EEN_218
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
48._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
49._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
50._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
51._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
52._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
53._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
54._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
55._GC-08-070-1-92
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
56._LCT_EEN_232
CCGG-TTGGTTAATTTTCCCCX_XX_XX_X
57._LCT_EEN_250
CCGG-TTGGCTACCTTTCCCCX_XX_XX_X
58._LCT_EEN_219
CCGG-TTGGTTAATTCCCCCCX_XX_XX_X
59._LCT_EEN_278
CCGG-TTGTTTAACTTTCCCCX_XX_XX_X
60._LCT_EEN_241
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
61._LCT_EEN_241
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
62._LCT_EEN_241
CCGGCCTTGGTTAATTTTCCCCX_XX_XX_X
63._LCT_EEN_241
CCGGCCTT_TTAATTTTCCCCX_XX_XX_X

Input profile: LCT_EEN_57

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

1._LCT_EEN_283

96.1 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 18 T1
 Dapeng Zhang, 2014

2._LCT_EEN_282

95.9 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

3._LCT_EEN_282

95.8 %
36 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

4._LCT_EEN_49

95.7 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

5._NAPO_25_[CHA] RUQ_1547

95.7 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

6._LCT_EEN_376

94.9 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

7._LCT_EEN_379

94.9 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

8._LCT_EEN_223

94.7 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

9._LCT_EEN_327

94.7 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 61 T1
 Dapeng Zhang, 2014

10._LCT_EEN_146

94.6 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

11._LCT_EEN_378

94.6 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

12._LCT_EEN_217

94.4 %
36 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

13._LCT_EEN_141

94.3 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

14._LCT_EEN_38

94.3 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

15._LCT_EEN_65

94.3 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

16._LCT_EEN_234

93.8 %
32 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

17._LCT_EEN_221

93.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

18._LCT_EEN_231

93.2 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

19._LCT_EEN_341_/S-2 RUQ_1548

93.2 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

20._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 9 > FP
 Dapeng Zhang, 2016

21._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 6 > FP
 Dapeng Zhang, 2016

22._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 2 > FP
 Dapeng Zhang, 2016

23._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 1 > FP
 Dapeng Zhang, 2016

24._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 11
 Dapeng Zhang, 2016

25._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 10
 Dapeng Zhang, 2016

26._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 7
 Dapeng Zhang, 2016

27._LCT_EEN_280

93.1 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8192 5
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

28._LCT_EEN_109_/S-102

92.9 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 137 T1
 Dapeng Zhang, 2014

29._LCT_EEN_37

92.9 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

30._LCT_EEN_52

92.9 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

31._LCT_EEN_321_/S-1

92.3 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A N2/428 T1
 Dapeng Zhang, 2014

32._LCT_EEN_163_/D

92.1 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 104 T1
 Dapeng Zhang, 2014

33._LCT_EEN_220

92.1 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

34._LCT_EEN_253

92.1 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

35._LCT_EEN_142

91.7 %
36 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

36._LCT_EEN_264

91.7 %
36 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

37._LCT_EEN_30

91.4 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

38._LCT_EEN_44_/S-9

91.4 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 146 T2
 Dapeng Zhang, 2014

39._LCT_EEN_63

91.4 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

40._AGU_31_[CHA] RUQ_1559

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

41._AMAZ_11 RUQ_1600

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

42._COCA_3308_/1_[CHA] RUQ_102

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

43._LCT_EEN_163_/A RUQ_178

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

44._LCT_EEN_163_/D RUQ_180

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

45._LCT_EEN_302 RUQ_687

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

46._LCT_EEN_241

91.2 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8841 2
 Dapeng Zhang, 2016

47._LCT_EEN_218

91 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

48._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

49._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

50._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

51._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

52._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

53._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP4
 Mars, 2018

54._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

55._LCT_EEN_280 GC-08-070-1-92

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

56._LCT_EEN_232

90.8 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

57._LCT_EEN_250

90.8 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 103 T2
 Dapeng Zhang, 2014

58._LCT_EEN_219

90.5 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

59._LCT_EEN_278

90.5 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Barbados
 Dapeng Zhang, 2014

60._LCT_EEN_241

90.3 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8841 6
 Dapeng Zhang, 2016

61._LCT_EEN_241

90.3 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8841 4
 Dapeng Zhang, 2016

62._LCT_EEN_241

90.3 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8841 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

63._LCT_EEN_241

90 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8841 3
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP591 17TcSNP619 18TcSNP645 19TcSNP723 20TcSNP836
21TcSNP872 22TcSNP878 23TcSNP891 24TcSNP917 25TcSNP929
26TcSNP953 27TcSNP994 28TcSNP998 29TcSNP1060 30TcSNP1062
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1520