SNP Profiles matching ICS 9

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
1._ICS_9	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
2._ICS_9	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
3._NA	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
4._NA	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
5._NA	CT	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
6._ICS_9	__	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
7._NA	__	AG	CG	CT	TT	AA	GT	CT	CT	AA	AA	CC	AA	CT
8._ICS_9	CT	AG	GG	CT	CT	AA	GT	CT	CT	AA	AA	CC	AA	CT
9._ICS_9	CT	AG	GG	CT	CT	AA	GT	CT	CT	AA	AA	CC	AA	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
1._ICS_9	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
2._ICS_9	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
3._NA	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
4._NA	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
5._NA	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
6._ICS_9	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
7._NA	AA	GG	TT	CC	GG	GT	GG	TT	CC	CC	TT	CC	CC	GG
8._ICS_9	AA	GG	TT	CC	GG	GT	AA	TT	CC	CC	TT	CC	CC	GG
9._ICS_9	AA	GG	TT	CC	GG	GT	AA	TT	CC	CC	TT	CC	CC	GG

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
1._ICS_9	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
2._ICS_9	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
3._NA	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
4._NA	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
5._NA	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
6._ICS_9	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
7._NA	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
8._ICS_9	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X
9._ICS_9	GG	AT	CT	AG	GG	AC	CT	TT	CC	AT	GG	X_X	X_X	X_X

Input profile: ICS_9

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8901 4

Dapeng Zhang, 2016

1._ICS_9

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8901 6

Dapeng Zhang, 2016

2._ICS_9

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8901 1

Dapeng Zhang, 2016

3._ICS_9 NA

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

4._ICS_9 NA

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

5._ICS_9 NA

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

6._ICS_9

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8901 7

Dapeng Zhang, 2016

7._ICS_9 NA

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

8._ICS_9

94.9 %
39 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: San Juan Block3

Dapeng Zhang, 2016

9._ICS_9

94.9 %
39 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: San Juan Block3

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1253	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25