SNP Profiles matching JA 9 /37 [POU]

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTAAGGCCTTAACCGTCCTTAAAACCAG
1._MAR_11___
TTAAGGCC__AACC__CC__AAAA__AA
2._MAR_12___
TTAAGGCC__AACC__CC__AAAA__AA
3._MAR_17___
TTAAGGCC__AACC__CC__AAAA__AA
4._MAR_1___
TTAAGGCC__AACC__CC__AAAA__AA
5._MAR_10___
TTAAGGCC__AACC__CC__AAAA__AA
6._MAR_13___
TTAAGGCC__AACC__CC__AAAA__AA
7._MAR_14___
TTAAGGCC__AACC__CC__AAAA__AA
8._MAR_21___
TTAAGGCC__AACC__CC__AAAA__AA
9._MAR_22___
TTAAGGCC__AACC__CC__AAAA__AA
10._MAR_9___
TTAAGGCC__AACC__CC__AAAA__AA
11._MARPER_22___
CTAAGGCC__AACC__CC__AAAA__AA
12._AMAZ_5_/2___
TTAAGGCCTTAACCTTCCTTAAAACCGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTCCGGGGAACTCCCCTTTTCC
1._MAR_11___
TTAAGG__CC__GGAATT__CC__TTCC
2._MAR_12___
TTAAGG__CC__GGAATT__CC__TTCC
3._MAR_17___
TTAAGG__CC__GGAATT__CC__TTCC
4._MAR_1___
TTAAGG__CC__GGAATT__GG__TTCC
5._MAR_10___
TTAAGG__CC__GGAATT__GG__TTCC
6._MAR_13___
TTAAGG__CC__GGAATT__GG__TTCC
7._MAR_14___
TTAAGG__CC__GGAATT__GG__TTCC
8._MAR_21___
TTAAGG__CC__GGAATT__GG__TTCC
9._MAR_22___
TTAAGG__CC__GGAATT__GG__TTCC
10._MAR_9___
TTAAGG__CC__GGAATT__GG__TTCC
11._MARPER_22___
TTAAGG__CC__GGAATT__CC__TTCC
12._AMAZ_5_/2___
TTAAGGTTCCGGGGAATTAACCTTTTCC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCAGCCACCTTTCCTTGGX_XX_X
1._MAR_11___
AAGG__CCAA______TT__TT__X_XX_X
2._MAR_12___
AAGG__CCAA______TT__TT__X_XX_X
3._MAR_17___
AAGG__CCAA______TT__TT__X_XX_X
4._MAR_1___
AAGG__CCAA______TT__TT__X_XX_X
5._MAR_10___
AAGG__CCAA______TT__TT__X_XX_X
6._MAR_13___
AAGG__CCAA______TT__TT__X_XX_X
7._MAR_14___
AAGG__CCAA______TT__TT__X_XX_X
8._MAR_21___
AAGG__CCAA______TT__TT__X_XX_X
9._MAR_22___
AAGG__CCAA______TT__TT__X_XX_X
10._MAR_9___
AAGG__CCAA______TT__TT__X_XX_X
11._MARPER_22___
AAGG__CCAA______GT__TT__X_XX_X
12._AMAZ_5_/2___
AAGGAACCAACCAACCTTCCTTGGX_XX_X

Input profile: JA_9_/37_[POU]

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5B E394 T8
 Dapeng Zhang, 2016

1._MAR_11

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B252 T2
 Dapeng Zhang, 2014

2._MAR_12

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B268 T2
 Dapeng Zhang, 2014

3._MAR_17

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B221 T1
 Dapeng Zhang, 2014

4._MAR_1

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B188 T1
 Dapeng Zhang, 2014

5._MAR_10

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B243 T1
 Dapeng Zhang, 2014

6._MAR_13

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B189 T1
 Dapeng Zhang, 2014

7._MAR_14

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B207 T1
 Dapeng Zhang, 2014

8._MAR_21

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B267 T2
 Dapeng Zhang, 2014

9._MAR_22

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B190 T1
 Dapeng Zhang, 2014

10._MAR_9

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A B220 T3
 Dapeng Zhang, 2014

11._MARPER_22

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER C 475
 Dapeng Zhang, 2014

12._AMAZ_5_/2

90 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A20 T1
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25