SNP Profiles matching LCT_EEN_46

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTAGCGTTCCCCCTGTCTCCTTGGCTAA
1._LCT_EEN_46___
TTAGCGTTCCCCCTGTCTCCTTGGCTAA
2._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
3._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
4._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
5._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
6._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
7._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
8._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
9._LCT_EEN_46___
TTAGCGTTCC__CTGTCTCCTTGGCTAA
10._LCT_EEN_46___
TTAGCGTTCC__CT__CTCCTTGGCTAA
11._LCT_EEN_46___
TTAGCGTTCC__CT__CTCCTTGGCTAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGCTCTGGGGAGTTCCCCGTCTAA
1._LCT_EEN_46___
TTAAGGCTCTGGGGAGTTCCCCGTCTAA
2._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
3._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
4._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
5._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
6._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
7._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
8._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
9._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
10._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
11._LCT_EEN_46___
TTAAGGCTCTGGGGAATTCCCCGTCTAA
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AGAGATCCAACCCCCCTTACAACCX_XX_X
1._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
2._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
3._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
4._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
5._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
6._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
7._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
8._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
9._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
10._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X
11._LCT_EEN_46___
AGAGATCCAACCCCCCTTACAACCX_XX_X

Input profile: LCT_EEN_46

 
Mars Center for Cocoa Science, Brazil
Location: 478
 Dapeng Zhang, 2016

1._LCT_EEN_46

identical
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 4A A 17 T1
 Dapeng Zhang, 2016

2._LCT_EEN_46

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3312 7
 Dapeng Zhang, 2016

3._LCT_EEN_46

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3312 1 > FP
 Dapeng Zhang, 2016

4._LCT_EEN_46

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3312 10
 Dapeng Zhang, 2016

5._LCT_EEN_46

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3312 9
 Dapeng Zhang, 2016

6._LCT_EEN_46 GC-03-033-3-12

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

7._LCT_EEN_46 GC-03-033-3-12

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

8._LCT_EEN_46 GC-03-033-3-12

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

9._LCT_EEN_46 GC-03-033-3-12

98.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

10._LCT_EEN_46

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3312 2
 Dapeng Zhang, 2016

11._LCT_EEN_46 GC-03-033-3-12

98.7 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25