SNP Profiles matching SCA 3

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CGAAACGGTTCCAACTAAAAGGAACCGG
1._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
2._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
3._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
4._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
5._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
6._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
7._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
8._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
9._SCA_3
CGAAACGGTTCCAACTAAAAGGAACCGG
10._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
11._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
12._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
13._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
14._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
15._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
16._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
17._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
18._GC-08-169-4-12
CGAAACGGTTCCAACTAAAAGGAACCGG
19._SCA_11
CGAAACGGTTCCAGCTAAAAGGAACCGG
20._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
21._RUQ_374
____CCGGTTCCAGCTAA__GGAACCGG
22._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
23._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
24._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
25._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
26._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
27._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
28._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
29._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
30._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
31._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
32._SCA_5
CGAAACGGTTCCGGCTAAAAGGAACCGG
33._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
34._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
35._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
36._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
37._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
38._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
39._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
40._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
41._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
42._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
43._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGGAACCGG
44._RUQ_46
CGAAACGGTTCCAACTAAAGGGAACCGG
45._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
46._SCA_5
CGAAACGGTTCCGGCTAAAAGG__CCGG
47._GC-01-092-5-09
CGAAACGGTTCCGGCTAAAAGG__CCGG
48._RUQ_46
____CCGGTTCCAACTAA__GGAACCGG
49._RUQ_357
____AAGGTTCCAGCTAA__GGACCCGG
50._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
51._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
52._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
53._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
54._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
55._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
56._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
57._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
58._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
59._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
60._SCA_19
CGAAACGGTTCCAACTAAAGGGAACCGG
61._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
62._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
63._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
64._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
65._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
66._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
67._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
68._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
69._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
70._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
71._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACCGG
72._RUQ_374
CGAAACGGTTCCAGCTAAAAGGAACCGG
73._SCA_19
CGAAACGGTTCCAACTAAAGGGAACC__
74._GC-03-004-1-04
CGAAACGGTTCCAACTAAAGGGAACC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCCCTTGGGGCCTTCTCCTTCCAACCGG
1._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
2._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
3._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
4._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
5._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
6._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
7._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
8._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
9._SCA_3
CCCCTTAAGGCCTTCTCCTTCCAACCGG
10._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
11._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
12._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
13._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
14._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
15._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
16._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
17._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
18._GC-08-169-4-12
CCCCTTAAGGCCTTCTCCTTCCAACCGG
19._SCA_11
CCCCTTGGGGCCTTCCCCTTCCAACCGG
20._SCA_5
CCCCTTGGGGCCTTCTCGTTCCAACCGG
21._RUQ_374
CCCCTT__GGCCTT________AACC__
22._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
23._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
24._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
25._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
26._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
27._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
28._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
29._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
30._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
31._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
32._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
33._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
34._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
35._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
36._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
37._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
38._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
39._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
40._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
41._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
42._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
43._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
44._RUQ_46
CCCCTTAGGGCCTTCTCCTTCCAACCGG
45._SCA_19
CCCCTTAGGGCCTTCTCCTTCCAACCGG
46._SCA_5
CCCCTTAGGGCCTTCTCGTTCCAACCGG
47._GC-01-092-5-09
CCCCTTAGGGCCTTCTCGTTCCAACCGG
48._RUQ_46
CCCCTT__GGCCTT________AACC__
49._RUQ_357
CCCCTT__GGCCTT________AACC__
50._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
51._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
52._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
53._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
54._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
55._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
56._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
57._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
58._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
59._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
60._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
61._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
62._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
63._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
64._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
65._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
66._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
67._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
68._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
69._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
70._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
71._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
72._RUQ_374
CCCCTTGGGGCCTTCCCCTTCCAACCGG
73._SCA_19
CCCCTTAAGGCCTTCTCCTTCCAACCGG
74._GC-03-004-1-04
CCCCTTAAGGCCTTCTCCTTCCAACCGG
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
1._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
2._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
3._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
4._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
5._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
6._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
7._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
8._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
9._SCA_3
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
10._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
11._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
12._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
13._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
14._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
15._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
16._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
17._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
18._GC-08-169-4-12
ATCCTTGTTTCCCCCTCCAACCX_XX_XX_X
19._SCA_11
AACCTTGTTTCCCTTTCCAACCX_XX_XX_X
20._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
21._RUQ_374
______GT______TTCCAA__X_XX_XX_X
22._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
23._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
24._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
25._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
26._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
27._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
28._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
29._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
30._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
31._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
32._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
33._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
34._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
35._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
36._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
37._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
38._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
39._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
40._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
41._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
42._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
43._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
44._RUQ_46
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
45._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
46._SCA_5
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
47._GC-01-092-5-09
ATCCTTGTTTCCCTTTCCAACCX_XX_XX_X
48._RUQ_46
______GG______TTCCAG__X_XX_XX_X
49._RUQ_357
______GG______CTCCAA__X_XX_XX_X
50._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
51._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
52._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
53._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
54._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
55._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
56._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
57._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
58._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
59._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
60._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
61._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
62._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
63._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
64._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
65._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
66._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
67._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
68._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
69._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
70._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
71._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
72._RUQ_374
AACCCTGTTTCCCTTTCCAGCCX_XX_XX_X
73._SCA_19
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X
74._GC-03-004-1-04
TTCCTTGGTTCCCCTTCCAGCCX_XX_XX_X

Input profile: SCA_3

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A26 T8