SNP Profiles matching CCN 51

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTAGGGTTTTACCTTTCCCTAAAGCTAA
1._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
2._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
3._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
4._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
5._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
6._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
7._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
8._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
9._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
10._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
11._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAAAGCTAA
12._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
13._GC-06-4-1-04
CTAGGGTTTTACCTTTCCCTAAAGCTAA
14._CCN_51
CTAGGGTTTTACCTTTCCCTAA__CTAA
15._GC-07-019-1-21
CTAGGGTTTTACCTTTCCCTAA__CTAA
16._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
17._CCN_51
CTAGGGTTTTACCTTTCCCTAAAGCTAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAACTCCCCGGAGCTCCCCTTCTACAG
1._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
2._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
3._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
4._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
5._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
6._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
7._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
8._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
9._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
10._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
11._GC-07-019-1-21
TTAACTCCCCGGAGCTCCCCTTCTACAG
12._CCN_51
TTAACTCCCCGGAGCTCCCCTTCTACAG
13._GC-06-4-1-04
TTAACTCCCCGGAGCTCCCCTTCTACAG
14._CCN_51
TTAACTCC__GGAGCT__CCTTCTACAG
15._GC-07-019-1-21
TTAACTCC__GGAGCT__CCTTCTACAG
16._CCN_51
CTAACTCCCCGGAGCTCCCCTTCTACAG
17._CCN_51
CTAACTCCCCGGAGCTCCCCTTCTACAG
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACTAACGAACCTTACTTGGX_XX_XX_X
1._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
2._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
3._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
4._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
5._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
6._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
7._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
8._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
9._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
10._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
11._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
12._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
13._GC-06-4-1-04
GGAACTAA__AACCTTACTTGGX_XX_XX_X
14._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
15._GC-07-019-1-21
GGAACTAACGAACCTTACTTGGX_XX_XX_X
16._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X
17._CCN_51
GGAACTAACGAACCTTACTTGGX_XX_XX_X

Input profile: CCN_51

 
Mars Center for Cocoa Science, Brazil
Location: 7121 4 > FP
 Dapeng Zhang, 2016

1._CCN_51

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 3 > FP
 Dapeng Zhang, 2016

2._CCN_51

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 14
 Dapeng Zhang, 2016

3._CCN_51

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 13
 Dapeng Zhang, 2016

4._CCN_51

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 12
 Dapeng Zhang, 2016

5._CCN_51

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 10
 Dapeng Zhang, 2016

6._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

7._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL4
Notes: PL4 FP2
 Mars, 2018

8._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
 Mars, 2018

9._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
 Mars, 2018

10._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
 Mars, 2018

11._CCN_51 GC-07-019-1-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
 Mars, 2018

12._CCN_51

identical
39 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

13._CCN_51 GC-06-4-1-04

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 4, Tree: PL7
Notes: PL7 FP
 Mars, 2018

14._CCN_51

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7121 6 > FP
 Dapeng Zhang, 2016

15._CCN_51 GC-07-019-1-21

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL6
Notes: PL6 FP4
 Mars, 2018

16._CCN_51

98.7 %
39 shared markers

 Dapeng Zhang, 2016

17._CCN_51

98.7 %
39 shared markers

 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25