SNP Profiles matching OC-61/VEN

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAATTCCGGAGTTCCTTCTGGTTCCCC
1._GC-05-039-1-39
AAAATTCCGGAGTTCCTTCTGGTTCCCC
2._GC-05-039-1-39
AAAATTCCGGAGTTCCTTCTGGTTCCCC
3._GC-05-039-1-39
AAAATTCCGGAGTTCCTTCTGGTTCCCC
4._GC-05-040-1-40
AAAATTCCGGAGTTCCTTCTGGTTCCCC
5._GC-05-040-1-40
AAAATTCCGGAGTTCCTTCTGGTTCCCC
6._GC-05-040-1-40
AAAATTCCGGAGTTCCTTCTGGTTCCCC
7._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
8._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
9._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
10._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
11._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
12._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
13._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
14._GC-05-039-1-39
AAAATTCCGGAGTTCCTTCTGGTTCCCC
15._GC-05-039-1-39
AAAATTCCGGAGTTCCTTCTGGTTCCCC
16._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
17._OC_61_[VEN]
AAAATTCC________TTCTGG__CC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATCCAAAAGGCCGGTTAGTTAGTTAACC
1._GC-05-039-1-39
ATCCAAAAGGCCGGTTAGTTAGTTAACC
2._GC-05-039-1-39
ATCCAAAAGGCCGGTTAGTTAGTTAACC
3._GC-05-039-1-39
ATCCAAAAGGCCGGTTAGTTAGTTAACC
4._GC-05-040-1-40
ATCCAAAAGGCCGGTTAGTTAGTTAACC
5._GC-05-040-1-40
ATCCAAAAGGCCGGTTAGTTAGTTAACC
6._GC-05-040-1-40
ATCCAAAAGGCCGGTTAGTTAGTTAACC
7._OC_61_[VEN]
______AA____GG________TTAA__
8._OC_61_[VEN]
______AA____GG________TTAA__
9._OC_61_[VEN]
______AA____GG________TTAA__
10._OC_61_[VEN]
______AA____GG________TTAA__
11._OC_61_[VEN]
______AA____GG________TTAA__
12._OC_61_[VEN]
______AA____GG________TTAA__
13._OC_61_[VEN]
______AA____GG________TTAA__
14._GC-05-039-1-39
ATCCAAAAGGCCGGTTAGTTAGTTAACC
15._GC-05-039-1-39
ATCCAAAAGGCCGGTTAGTTAGTTAACC
16._OC_61_[VEN]
______AA____GG________TTAA__
17._OC_61_[VEN]
______AA____GG________TTAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CGAATTAACCCCAGTTGGTTAACTAACC
1._GC-05-039-1-39
CGAATTAACCCCAGTTGGTTAACTAACC
2._GC-05-039-1-39
CGAATTAACCCCAGTTGGTTAACTAACC
3._GC-05-039-1-39
CGAATTAACCCCAGTTGGTTAACTAACC
4._GC-05-040-1-40
CGAATTAACCCCAGTTGGTTAACTAACC
5._GC-05-040-1-40
CGAATTAACCCCAGTTGGTTAACTAACC
6._GC-05-040-1-40
CGAATTAACCCCAGTTGGTTAACTAACC
7._OC_61_[VEN]
CGAA____CC__AGTT____AA______
8._OC_61_[VEN]
CGAA____CC__AGTT____AA______
9._OC_61_[VEN]
CGAA____CC__AGTT____AA______
10._OC_61_[VEN]
CGAA____CC__AGTT____AA______
11._OC_61_[VEN]
CGAA____CC__AGTT____AA______
12._OC_61_[VEN]
CGAA____CC__AGTT____AA______
13._OC_61_[VEN]
CGAA____CC__AGTT____AA______
14._GC-05-039-1-39
CGAATTAACCCCAGTTGGTTAACTAACC
15._GC-05-039-1-39
CGAATTAACCCCAGTTGGTTAACTAACC
16._OC_61_[VEN]
CGAA____CC__AGTT____AA______
17._OC_61_[VEN]
CGAA____CC__AGTT____AA______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAGAGAACTCCGGGGGGTTCCTT
1._GC-05-039-1-39
GGTTCCAGAGAACTCCGGGGGGTTCCTT
2._GC-05-039-1-39
GGTTCCAGAGAACTCCGGGGGGTTCCTT
3._GC-05-039-1-39
GGTTCCAGAGAACTCCGGGGGGTTCCTT
4._GC-05-040-1-40
GGTTCCAGAGAACTCCGGGGGGTTCCTT
5._GC-05-040-1-40
GGTTCCAGAGAACTCCGGGGGGTTCCTT
6._GC-05-040-1-40
GGTTCCAGAGAACTCCGGGGGGTTCCTT
7._OC_61_[VEN]
____CC__________________CCTT
8._OC_61_[VEN]
____CC__________________CCTT
9._OC_61_[VEN]
____CC__________________CCTT
10._OC_61_[VEN]
____CC__________________CCTT
11._OC_61_[VEN]
____CC__________________CCTT
12._OC_61_[VEN]
____CC__________________CCTT
13._OC_61_[VEN]
____CC__________________CCTT
14._GC-05-039-1-39
GGTTCCAGAGAACTCCGGGGGGTTCCTT
15._GC-05-039-1-39
GGTTCCAGAGAACTCCGGGGGGTTCCTT
16._OC_61_[VEN]
____CC__________________CCTT
17._OC_61_[VEN]
____CC__________________CCTT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
1._GC-05-039-1-39
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
2._GC-05-039-1-39
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
3._GC-05-039-1-39
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
4._GC-05-040-1-40
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
5._GC-05-040-1-40
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
6._GC-05-040-1-40
TTGGCGTTCTAAGGGGCCAGTTGGGGCT
7._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
8._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
9._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
10._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
11._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
12._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
13._OC_61_[VEN]
____CG__CTAAGG__CCAGTTGG____
14._GC-05-039-1-39
TTGGCGTTCTAAGGGGACAGTTGGGGCT
15._GC-05-039-1-39
TTGGCGTTCTAAGGGGACAGTTGGGGCT
16._OC_61_[VEN]
____CG__CTAAGG__ACAGTTGG____
17._OC_61_[VEN]
____CG__CTAAGG__ACAGTTGG____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCGGTTACAGCCAAGGCCGGCTAACCTT
1._GC-05-039-1-39
CCGGTTACAGCCAAGGCCGGCTAACCTT
2._GC-05-039-1-39
CCGGTTACAGCCAAGGCCGGCTAACCTT
3._GC-05-039-1-39
CCGGTTACAGCCAAGGCCGGCTAACCTT
4._GC-05-040-1-40
CCGGTTACAGCCAAGGCCGGCTAACCTT
5._GC-05-040-1-40
CCGGTTACAGCCAAGGCCGGCTAACCTT
6._GC-05-040-1-40
CCGGTTACAGCCAAGGCCGGCTAACCTT
7._OC_61_[VEN]
__GGTT__________CCGG______TT
8._OC_61_[VEN]
__GGTT__________CCGG______TT
9._OC_61_[VEN]
__GGTT__________CCGG______TT
10._OC_61_[VEN]
__GGTT__________CCGG______TT
11._OC_61_[VEN]
__GGTT__________CCGG______TT
12._OC_61_[VEN]
__GGTT__________CCGG______TT
13._OC_61_[VEN]
__GGTT__________CCGG______TT
14._GC-05-039-1-39
CCGGTTACAGCCAAGGCCGGCTAACCTT
15._GC-05-039-1-39
CCGGTTACAGCCAAGGCCGGCTAACCTT
16._OC_61_[VEN]
__GGTT__________CCGG______TT
17._OC_61_[VEN]
__GGTT__________CCGG______TT
 85 86 87 88 89 90 91 92 93 94     
_Input profile
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
1._GC-05-039-1-39
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
2._GC-05-039-1-39
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
3._GC-05-039-1-39
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
4._GC-05-040-1-40
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
5._GC-05-040-1-40
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
6._GC-05-040-1-40
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
7._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
8._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
9._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
10._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
11._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
12._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
13._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
14._GC-05-039-1-39
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
15._GC-05-039-1-39
TTTTTTAACCCCTTTTAAGGX_XX_XX_XX_X
16._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X
17._OC_61_[VEN]
TTTT__AA__CCTTTT____X_XX_XX_XX_X

Input profile: OC_61_[VEN] GC-05-040-1-40

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 4