SNP Profiles matching MAN-15/2

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCACGGAGCCCCCTCTGGTTCTCT
1._GC-05-072-2-23
AACCCCACGGAGCCCCCTCTGGTTCTCT
2._GC-05-072-2-23
AA__CCACGGAGCCCCCTCTGGTTCTCT
3._GC-05-072-2-23
AA__CCACGGAGCCCCCTCTGGTTCTCT
4._GC-05-072-2-23
AA__CCACGGAGCCCCCTCTGGTTCTCT
5._MAN_15_/2_[BRA]
AACCCCAC________CTCTGG__CT__
6._MAN_15_/2_[BRA]
AACCCCAC________CTCTGG__CT__
7._MAN_15_/2_[BRA]
AA__CCAC________CTCTGG__CT__
8._MAN_15_/2_[BRA]
AA__CCAC________CTCTGG__CT__
9._MAN_15_/2_[BRA]
AA__CCAC________CTCTGG__CT__
10._RUQ_87
____CCAC____CC__CT____TTTT__
11._GC-05-055-2-06
AA__CCACGGGGCTCCCTCCGGTTCTCT
12._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
13._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
14._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
15._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
16._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
17._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
18._GC-05-055-2-06
AA__CCACGGGGCTCCCTCCGGTTCTCT
19._GC-05-055-2-06
AA__CCACGGGGCTCCCTCCGGTTCTCT
20._GC-05-148-4-01
AA__CCACGGGGCTCCCTCCGGTTCTCT
21._GC-05-148-4-01
AA__CCACGGGGCTCCCTCCGGTTCTCT
22._GC-05-148-4-01
AA__CCACGGGGCTCCCTCCGGTTCTCT
23._GC-05-148-4-01
AA__CCACGGGGCTCCCTCCGGTTCTCT
24._GC-08-050-1-61
AA__CCACGGGGCTCCCTCCGGTTCTCT
25._GC-05-055-2-06
AA__CCACGGGGCTCCCTCCGGTTCTCT
26._GC-05-055-2-06
AA__CCACGGGGCTCCCTCCGGTTCTCT
27._GC-05-148-4-01
AA__CCACGGGGCTCCCTCCGGTTCTCT
28._RUQ_86
____CCAC____CC__CT____TTTT__
29._MAN_15_/2_[BRA]
AACCCCAC________CTCTGG__CT__
30._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
31._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
32._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
33._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
34._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
35._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
36._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
37._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
38._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
39._LP_1_/41_[POU]
AA__CCAC________CTCCGG__CT__
40._MAN_15_/2_[BRA]
AACCCCAC________CTCTGG__CT__
41._RUQ_86
AACCCCAC________CTCTGG__CT__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATCCAAGGGGCCGGCTAATTGGATAACG
1._GC-05-072-2-23
ATCCAAGGGGCCGGCTAATTGGATAACG
2._GC-05-072-2-23
ATCCAAGGGGCCGGCTAATTGGATAACG
3._GC-05-072-2-23
ATCCAAGGGGCCGGCTAATTGGATAACG
4._GC-05-072-2-23
ATCCAAGGGGCCGGCTAATTGGATAACG
5._MAN_15_/2_[BRA]
______GG____GG________ATAA__
6._MAN_15_/2_[BRA]
______GG____GG________ATAA__
7._MAN_15_/2_[BRA]
______GG____GG________ATAA__
8._MAN_15_/2_[BRA]
______GG____GG________ATAA__
9._MAN_15_/2_[BRA]
______GG____GG________ATAA__
10._RUQ_87
__________CC________GG__AA__
11._GC-05-055-2-06
ATACAAAGGGCCGGCTAATTGGATAACG
12._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
13._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
14._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
15._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
16._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
17._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
18._GC-05-055-2-06
ATACAAAGGGCCGGCTAATTGGATAACG
19._GC-05-055-2-06
ATACAAAGGGCCGGCTAATTGGATAACG
20._GC-05-148-4-01
ATACAAAGGGCCGGCTAATTGGATAACG
21._GC-05-148-4-01
ATACAAAGGGCCGGCTAATTGGATAACG
22._GC-05-148-4-01
ATACAAAGGGCCGGCTAATTGGATAACG
23._GC-05-148-4-01
ATACAAAGGGCCGGCTAATTGGATAACG
24._GC-08-050-1-61
ATACAAAGGGCCGGCTAATTGGATAACG
25._GC-05-055-2-06
ATAC__AGGGCCGGCTAATTGGATAACG
26._GC-05-055-2-06
ATACAAAGGGCCGGCTAATTGGATAACG
27._GC-05-148-4-01
ATACAAAGGG__GGCTAATTGGATAACG
28._RUQ_86
__________CC________GG__AA__
29._MAN_15_/2_[BRA]
______AG____GG________ATAA__
30._LP_1_/41_[POU]
______AG____GG________ATAA__
31._LP_1_/41_[POU]
______AG____GG________ATAA__
32._LP_1_/41_[POU]
______AG____GG________ATAA__
33._LP_1_/41_[POU]
______AG____GG________ATAA__
34._LP_1_/41_[POU]
______AG____GG________ATAA__
35._LP_1_/41_[POU]
______AG____GG________ATAA__
36._LP_1_/41_[POU]
______AG____GG________ATAA__
37._LP_1_/41_[POU]
______AG____GG________ATAA__
38._LP_1_/41_[POU]
______AG____GG________ATAA__
39._LP_1_/41_[POU]
______AG____GG________ATAA__
40._MAN_15_/2_[BRA]
______AG____GG________ATAA__
41._RUQ_86
______AG____GG________ATAA__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGAGCGCCAAGTGGGTAACTGG
1._GC-05-072-2-23
GGAATTGGAGCGCCAAGTGGGTAACTGG
2._GC-05-072-2-23
GGAATTGGAGCGCCAAGTGGGTAACTGG
3._GC-05-072-2-23
GGAATTGGAGCGCCAAGTGGGTAACTGG
4._GC-05-072-2-23
GGAATTGGAGCGCCAAGTGGGTAACTGG
5._MAN_15_/2_[BRA]
GGAA______CG__AAGT____AA____
6._MAN_15_/2_[BRA]
GGAA______CG__AAGT____AA____
7._MAN_15_/2_[BRA]
GGAA______CG__AAGT____AA____
8._MAN_15_/2_[BRA]
GGAA______CG__AAGT____AA____
9._MAN_15_/2_[BRA]
GGAA______CG__AAGT____AA____
10._RUQ_87
GG______AGCGCCAAGT____AACT__
11._GC-05-055-2-06
GGAATTGGAGGGCCAAGTGGGTAACTAG
12._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
13._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
14._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
15._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
16._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
17._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
18._GC-05-055-2-06
GGAATTGGAGGGCCAAGTGGGTAACTAG
19._GC-05-055-2-06
GGAATTGGAGGGCCAAGTGGGTAACTAG
20._GC-05-148-4-01
GGAATTGGAGGGCCAAGTGGGTAACTAG
21._GC-05-148-4-01
GGAATTGGAGGGCCAAGTGGGTAACTAG
22._GC-05-148-4-01
GGAATTGGAGGGCCAAGTGGGTAACTAG
23._GC-05-148-4-01
GGAATTGGAGGGCCAAGTGGGTAACTAG
24._GC-08-050-1-61
GGAATTGGAGGGCCAAGTGGGTAACTAG
25._GC-05-055-2-06
GGAATTGGAGGGCCAAGTGGGTAACTAG
26._GC-05-055-2-06
GGAATTGGAGGGCCAAGTGGGTAACTAG
27._GC-05-148-4-01
GGAATTGGAGGGCCAAGTGGGTAACTAG
28._RUQ_86
GG______AGCGCCAAGT____AACT__
29._MAN_15_/2_[BRA]
GGAA______GG__AAGT____AA____
30._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
31._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
32._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
33._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
34._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
35._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
36._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
37._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
38._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
39._LP_1_/41_[POU]
GGAA______GG__AAGT____AA____
40._MAN_15_/2_[BRA]
GGAA______GG__AAGT____AA____
41._RUQ_86
GGAA______GG__AAGT____AG____
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTTTAAAGAACCACGGAGGTTTCC
1._GC-05-072-2-23
CCGGTTTTAAAGAACCACGGAGGTTTCC
2._GC-05-072-2-23
CCGGTTTTAAAGAACCACGGAGGTTTCC
3._GC-05-072-2-23
CCGGTTTTAAAGAACCACGGAGGTTTCC
4._GC-05-072-2-23
CCGGTTTTAAAGAACCACGGAGGTTTCC
5._MAN_15_/2_[BRA]
______TT__________________CC
6._MAN_15_/2_[BRA]
______TT__________________CC
7._MAN_15_/2_[BRA]
______TT__________________CC
8._MAN_15_/2_[BRA]
______TT__________________CC
9._MAN_15_/2_[BRA]
______TT__________________CC
10._RUQ_87
__GGTT____AG____________CTCC
11._GC-05-055-2-06
CCGGTTTTAAAGAACCACGGAAGTTTCT
12._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
13._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
14._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
15._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
16._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
17._GC-08-050-1-61
CCGGTTTTAAAGAACCACGGAAGTTTCT
18._GC-05-055-2-06
CCGGTTTTAAAGAACCACGGAAGTTTCT
19._GC-05-055-2-06
CCGGTTTTAAAGAACCACGGAAGTTTCT
20._GC-05-148-4-01
CCGGTTTTAAAGAACCACGGAAGTTTCT
21._GC-05-148-4-01
CCGGTTTTAAAGAACCACGGAAGTTTCT
22._GC-05-148-4-01
CCGGTTTTAAAGAACCACGGAAGTTTCT
23._GC-05-148-4-01
CCGGTTTTAAAGAACCACGGAAGTTTCT
24._GC-08-050-1-61
CCGGTTTTAAAG__CCACGGAAGTTTCT
25._GC-05-055-2-06
CCGGTTTTAAAGAACCACGGAAGTTTCT
26._GC-05-055-2-06
CCGGTTTTAAAGAA__ACGGAAGTTTCT
27._GC-05-148-4-01
CCGGTTTTAAAGAACCACGGAAGTTTCT
28._RUQ_86
__GGTT____AG____________CTCT
29._MAN_15_/2_[BRA]
______TT__________________CT
30._LP_1_/41_[POU]
______TT__________________CT
31._LP_1_/41_[POU]
______TT__________________CT
32._LP_1_/41_[POU]
______TT__________________CT
33._LP_1_/41_[POU]
______TT__________________CT
34._LP_1_/41_[POU]
______TT__________________CT
35._LP_1_/41_[POU]
______TT__________________CT
36._LP_1_/41_[POU]
______TT__________________CT
37._LP_1_/41_[POU]
______TT__________________CT
38._LP_1_/41_[POU]
______TT__________________CT
39._LP_1_/41_[POU]
______TT__________________CT
40._MAN_15_/2_[BRA]
______TT__________________CT
41._RUQ_86
______TT__________________CT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTGGCGCTCCAAGGGGCCAAGTGGAG
1._GC-05-072-2-23
CCTTGGCGCTCCAAGGGGCCAAGTGGAG
2._GC-05-072-2-23
CCTTGGCGCTCCAAGGGGCCAAGTGGAG
3._GC-05-072-2-23
CCTTGGCGCTCCAAGGGGCCAAGTGGAG
4._GC-05-072-2-23
CCTTGGCGCTCCAAGGGGCCAAGTGGAG
5._MAN_15_/2_[BRA]
CC____CG__CCAAGG__CCAAGTGG__
6._MAN_15_/2_[BRA]
CC____CG__CCAAGG__CCAAGTGG__
7._MAN_15_/2_[BRA]
CC____CG__CCAAGG__CCAAGTGG__
8._MAN_15_/2_[BRA]
CC____CG__CCAAGG__CCAAGTGG__
9._MAN_15_/2_[BRA]
CC____CG__CCAAGG__CCAAGTGG__
10._RUQ_87
__TT__CGCTCCAC__GGCCAAGTGGAG
11._GC-05-055-2-06
CCTT__CGCTCCAAGGGGCCAGGTGGAG
12._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
13._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
14._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
15._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
16._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
17._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
18._GC-05-055-2-06
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
19._GC-05-055-2-06
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
20._GC-05-148-4-01
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
21._GC-05-148-4-01
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
22._GC-05-148-4-01
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
23._GC-05-148-4-01
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
24._GC-08-050-1-61
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
25._GC-05-055-2-06
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
26._GC-05-055-2-06
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
27._GC-05-148-4-01
CCTTAGCGCTCCAAGGGGCCAGGTGGAG
28._RUQ_86
__TT__CGCTCCAC__GGCCAGGTGGAG
29._MAN_15_/2_[BRA]
CC____CG__CCACGG__CCAGGTGG__
30._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
31._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
32._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
33._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
34._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
35._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
36._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
37._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
38._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
39._LP_1_/41_[POU]
CC____CG__CCAAGG__CCAGGTGG__
40._MAN_15_/2_[BRA]
CC____CG__CCACGG__CCAGGTGG__
41._RUQ_86
CC____CG__CCACGG__CCAGGTGG__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCCGAACTCCAGACACAGACCGCCAAAC
1._GC-05-072-2-23
CCCGAACTCCAGACACAGACCGCCAAAC
2._GC-05-072-2-23
CCCGAACTCCAGACACAGACCGCCAAAC
3._GC-05-072-2-23
CCCGAACTCCAGACACAGACCGCCAAAC
4._GC-05-072-2-23
CCCGAACTCCAGACACAGACCGCCAAAC
5._MAN_15_/2_[BRA]
____AACT__________ACCG______
6._MAN_15_/2_[BRA]
____AACT__________ACCG______
7._MAN_15_/2_[BRA]
____AACT__________ACCG______
8._MAN_15_/2_[BRA]
____AACT__________ACCG______
9._MAN_15_/2_[BRA]
____AACT__________ACCG______
10._RUQ_87
__________________ACCG____AC
11._GC-05-055-2-06
CCCGAACTCCAGACACAGACCGCCAAAC
12._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
13._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
14._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
15._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
16._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
17._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
18._GC-05-055-2-06
CCCGAACTCCAGACACAGACCGCCAAAC
19._GC-05-055-2-06
CCCGAACTCCAGACACAGACCGCCAAAC
20._GC-05-148-4-01
CCCGAACTCCAGACACAGACCGCCAAAC
21._GC-05-148-4-01
CCCGAACTCCAGACACAGACCGCCAAAC
22._GC-05-148-4-01
CCCGAACTCCAGACACAGACCGCCAAAC
23._GC-05-148-4-01
CCCGAACTCCAGACACAGACCGCCAAAC
24._GC-08-050-1-61
CCCGAACTCCAGACACAGACCGCCAAAC
25._GC-05-055-2-06
CCCGAACTCCAGACACAGACCGCCAAAC
26._GC-05-055-2-06
CCCGAACTCCAGACACAGACCGCCAAAC
27._GC-05-148-4-01
CCCGAACTCCAGACACAGACCGCCAAAC
28._RUQ_86
__________________ACCG____AC
29._MAN_15_/2_[BRA]
____AACT__________ACCG______
30._LP_1_/41_[POU]
____AACT__________ACCG______
31._LP_1_/41_[POU]
____AACT__________ACCG______
32._LP_1_/41_[POU]
____AACT__________ACCG______
33._LP_1_/41_[POU]
____AACT__________ACCG______
34._LP_1_/41_[POU]
____AACT__________ACCG______
35._LP_1_/41_[POU]
____AACT__________ACCG______
36._LP_1_/41_[POU]
____AACT__________ACCG______
37._LP_1_/41_[POU]
____AACT__________ACCG______
38._LP_1_/41_[POU]
____AACT__________ACCG______
39._LP_1_/41_[POU]
____AACT__________ACCG______
40._MAN_15_/2_[BRA]
____AACT__________ACCG______
41._RUQ_86
____AACT__________ACCG______
 85 86 87 88 89 90 91 92 93 94 95    
_Input profile
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
1._GC-05-072-2-23
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
2._GC-05-072-2-23
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
3._GC-05-072-2-23
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
4._GC-05-072-2-23
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
5._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
6._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
7._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
8._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
9._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
10._RUQ_87
CC______AGCCTT________X_XX_XX_X
11._GC-05-055-2-06
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
12._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
13._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
14._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
15._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
16._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
17._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
18._GC-05-055-2-06
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
19._GC-05-055-2-06
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
20._GC-05-148-4-01
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
21._GC-05-148-4-01
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
22._GC-05-148-4-01
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
23._GC-05-148-4-01
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
24._GC-08-050-1-61
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
25._GC-05-055-2-06
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
26._GC-05-055-2-06
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
27._GC-05-148-4-01
CCCTTTTTAGCCTTGTCTATGGX_XX_XX_X
28._RUQ_86
CC______AGCCTT________X_XX_XX_X
29._MAN_15_/2_[BRA]
CCCTTT__AG__TTGTCT____X_XX_XX_X
30._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
31._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
32._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
33._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
34._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
35._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
36._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
37._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
38._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
39._LP_1_/41_[POU]
CCCTTT__AG__TTGTCT____X_XX_XX_X
40._MAN_15_/2_[BRA]
CC__TT__AG__TTGTCT____X_XX_XX_X
41._RUQ_86
CCCTTT__AG__TTGTCT____X_XX_XX_X

Input profile: MAN_15_/2_[BRA] GC-05-072-2-23

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

1._MAN_15_/2_[BRA] GC-05-072-2-23

identical
95 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

2._MAN_15_/2_[BRA] GC-05-072-2-23

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

3._MAN_15_/2_[BRA] GC-05-072-2-23

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

4._MAN_15_/2_[BRA] GC-05-072-2-23

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._MAN_15_/2_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5223 5 > FP
 Dapeng Zhang, 2016

6._MAN_15_/2_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5223 2 > FP
 Dapeng Zhang, 2016

7._MAN_15_/2_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5223 3 > FP
 Dapeng Zhang, 2016

8._MAN_15_/2_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5223 1 > FP
 Dapeng Zhang, 2016

9._MAN_15_/2_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5223 4
 Dapeng Zhang, 2016

10._MAN_15_/60_[BRA] RUQ_87

96.3 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

11._LP_1_/41_[POU] GC-05-055-2-06

94.6 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

12._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

13._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

14._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

15._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

16._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

17._IMC_119 GC-08-050-1-61

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._LP_1_/41_[POU] GC-05-055-2-06

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

19._LP_1_/41_[POU] GC-05-055-2-06

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

20._LP_1_/41_[POU] GC-05-148-4-01

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

21._LP_1_/41_[POU] GC-05-148-4-01

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP4
 Mars, 2018

22._LP_1_/41_[POU] GC-05-148-4-01

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

23._LP_1_/41_[POU] GC-05-148-4-01

94.1 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

24._IMC_119 GC-08-050-1-61

94.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

25._LP_1_/41_[POU] GC-05-055-2-06

94.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

26._LP_1_/41_[POU] GC-05-055-2-06

94.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

27._LP_1_/41_[POU] GC-05-148-4-01

94.1 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

28._MAN_15_/2_[BRA] RUQ_86

93.8 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

29._MAN_15_/2_[BRA]

93.8 %
40 shared markers

 View  View all  Clone  Any
Malaysian Cocoa Board (MCB), Malaysia
Location: C0297
 Dapeng Zhang, 2016

30._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5401 2 > FP
 Dapeng Zhang, 2016

31._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5401 1 > FP
 Dapeng Zhang, 2016

32._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5401 5
 Dapeng Zhang, 2016

33._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5401 4
 Dapeng Zhang, 2016

34._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5401 3
 Dapeng Zhang, 2016

35._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5206 3 > FP
 Dapeng Zhang, 2016

36._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5206 1 > FP
 Dapeng Zhang, 2016

37._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5206 5
 Dapeng Zhang, 2016

38._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5206 4
 Dapeng Zhang, 2016

39._LP_1_/41_[POU]

93.6 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5206 2
 Dapeng Zhang, 2016

40._MAN_15_/2_[BRA]

93.6 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A N3/476 T2
 Dapeng Zhang, 2016

41._MAN_15_/2_[BRA] RUQ_86

92.5 %
40 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240