SNP Profiles matching UCAYALI-12

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCCCAAAATTTTCCTTAGTTTTTT
1._GC-08-184-4-27
AACCCCCCAAAATTTTCCTTAGTTTTTT
2._GC-08-184-4-27
AACCCCCCAAAATTTTCCTTAGTTTTTT
3._GC-08-184-4-27
AACCCCCCAAAATTTTCCTTAGTTTTTT
4._GC-08-184-4-27
AACCCCCCAAAATTTTCCTTAGTTTTTT
5._GC-08-185-4-28
AACCCCCCAAAATTTTCCTTAGTTTTTT
6._GC-08-185-4-28
AACCCCCCAAAATTTTCCTTAGTTTTTT
7._GC-08-185-4-28
AACCCCCCAAAATTTTCCTTAGTTTTTT
8._GC-08-185-4-28
AACCCCCCAAAATTTTCCTTAGTTTTTT
9._GC-08-185-4-28
__CCCCCCAAAATTTTCCTTAGTTTTTT
10._U_12_[PER]
AACCCCCC________CCTTAG__TT__
11._U_12_[PER]
AACCCCCC________CCTTAG__TT__
12._U_12_[PER]
AACCCCCC________CCTTAG__TT__
13._U_12_[PER]
AACCCCCC________CCTTAG__TT__
14._U_12_[PER]
AACCCCCC________CCTTAG__TT__
15._U_12_[PER]
AACCCCCC________CCTTAG__TT__
16._U_12_[PER]
AACCCCCC________CCTTAG__TT__
17._U_12_[PER]
AACCCCCC________CCTTAG__TT__
18._U_12_[PER]
AACCCCCC________CCTTAG__TT__
19._U_12_[PER]
__CCCCCC________CCTTAG__TT__
20._U_12_[PER]
__CCCCCC________CCTTAG__TT__
21._SCA_11
ATCCCCCC________CCTTAG__TT__
22._SCA_11
ATCCCCCC________CCTTAG__TT__
23._SCA_11
ATCCCCCC________CCTTAG__TT__
24._SCA_11
ATCCCCCC________CCTTAG__TT__
25._SCA_11
ATCCCCCC________CCTTAG__TT__
26._SCA_11
ATCCCCCC________CCTTAG__TT__
27._SCA_11
ATCCCCCC________CCTTAG__TT__
28._SCA_11
ATCCCCCC________CCTTAG__TT__
29._SCA_11
ATCCCCCC________CCTTAG__TT__
30._SCA_11
ATCCCCCC________CCTTAG__TT__
31._SCA_11
ATCCCCCC________CCTTAG__TT__
32._SCA_11
ATCCCCCC________CCTTAG__TT__
33._SCA_11
ATCCCCCC________CCTTAG__TT__
34._SCA_11
ATCCCCCC________CCTTAG__TT__
35._SCA_11
ATCCCCCC________CCTTAG__TT__
36._SCA_11
ATCCCCCC________CCTTAG__TT__
37._SCA_11
ATCCCCCC________CCTTAG__TT__
38._SCA_11
ATCCCCCC________CCTTAG__TT__
39._SCA_11
ATCCCCCC________CCTTAG__TT__
40._SCA_11
ATCCCCCC________CCTTAG__TT__
41._SCA_19
TTCCCCCC________CCTTAG__TT__
42._SCA_19
TTCCCCCC________CCTTAG__TT__
43._SCA_19
TTCCCCCC________CCTTAG__TT__
44._SCA_19
TTCCCCCC________CCTTAG__TT__
45._SCA_19
TTCCCCCC________CCTTAG__TT__
46._SCA_19
TTCCCCCC________CCTTAG__TT__
47._SCA_19
TTCCCCCC________CCTTAG__TT__
48._SCA_19
TTCCCCCC________CCTTAG__TT__
49._SCA_19
TTCCCCCC________CCTTAG__TT__
50._SCA_19
TTCCCCCC________CCTTAG__TT__
51._SCA_19
TTCCCCCC________CCTTAG__TT__
52._SCA_11
ATCCCCCC________CCTTAG______
53._SCA_11
AT__CCCC________CCTTAG__TT__
54._SCA_11
ATCCCCCC________CCTTAG__TT__
55._SCA_11
ATCCCCCC________CCTT____TT__
56._SCA_11
ATCCCCCC________CCTTAG__TT__
57._SCA_19
TTCCCCCC________CCTTAG__TT__
58._SCA_11
ATCCCCCC________CCTTAG__TT__
59._RUQ_46
____CCCC____CT__CC____TTTT__
60._RUQ_234
____CCCC____CT__CT____TTTT__
61._RUQ_46
TTCCCCCC________CCTTAG__TT__
62._SCA_6
ATCCCCCC________CCTTAG__TT__
63._SCA_19
TTCCCCCC________CCTTAG__TT__
64._MARPER_44
ATCCCC____________TTAG__TT__
65._GC-04-003-1-03
AACCCCCCAAAACTTTCTTTAGTTTTTT
66._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
67._GC-08-157-3-56
ATCCCCCCAG__TTTTCCTTAGTTTTTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGCCCCCCCCAACCGGAAAAGG
1._GC-08-184-4-27
TTCCAAGGCCCCCCCCAACCGGAAAAGG
2._GC-08-184-4-27
TTCCAAGGCCCCCCCCAACCGGAAAAGG
3._GC-08-184-4-27
TTCCAAGGCCCCCCCCAACCGGAAAAGG
4._GC-08-184-4-27
TTCCAAGGCCCCCCCCAACCGGAAAAGG
5._GC-08-185-4-28
TTCCAAGGCCCCCCCCAACCGGAAAAGG
6._GC-08-185-4-28
TTCCAAGGCCCCCCCCAACCGGAAAAGG
7._GC-08-185-4-28
TTCCAAGGCCCCCCCCAACCGGAAAAGG
8._GC-08-185-4-28
TTCCAAGGCCCCCCCCAACCGGAAAAGG
9._GC-08-185-4-28
TTCCAAGGCCCCCCCCAACCGGAAAAGG
10._U_12_[PER]
______GG____CC________AAAA__
11._U_12_[PER]
______GG____CC________AAAA__
12._U_12_[PER]
______GG____CC________AAAA__
13._U_12_[PER]
______GG____CC________AAAA__
14._U_12_[PER]
______GG____CC________AAAA__
15._U_12_[PER]
______GG____CC________AAAA__
16._U_12_[PER]
______GG____CC________AAAA__
17._U_12_[PER]
______GG____CC________AAAA__
18._U_12_[PER]
______GG____CC________AAAA__
19._U_12_[PER]
______GG____CC________AAAA__
20._U_12_[PER]
______GG____CC________AAAA__
21._SCA_11
______GG____CC________AAAA__
22._SCA_11
______GG____CC________AAAA__
23._SCA_11
______GG____CC________AAAA__
24._SCA_11
______GG____CC________AAAA__
25._SCA_11
______GG____CC________AAAA__
26._SCA_11
______GG____CC________AAAA__
27._SCA_11
______GG____CC________AAAA__
28._SCA_11
______GG____CC________AAAA__
29._SCA_11
______GG____CC________AAAA__
30._SCA_11
______GG____CC________AAAA__
31._SCA_11
______GG____CC________AAAA__
32._SCA_11
______GG____CC________AAAA__
33._SCA_11
______GG____CC________AAAA__
34._SCA_11
______GG____CC________AAAA__
35._SCA_11
______GG____CC________AAAA__
36._SCA_11
______GG____CC________AAAA__
37._SCA_11
______GG____CC________AAAA__
38._SCA_11
______GG____CC________AAAA__
39._SCA_11
______GG____CC________AAAA__
40._SCA_11
______GG____CC________AAAA__
41._SCA_19
______GG____CC________AAAA__
42._SCA_19
______GG____CC________AAAA__
43._SCA_19
______GG____CC________AAAA__
44._SCA_19
______GG____CC________AAAA__
45._SCA_19
______GG____CC________AAAA__
46._SCA_19
______GG____CC________AAAA__
47._SCA_19
______GG____CC________AAAA__
48._SCA_19
______GG____CC________AAAA__
49._SCA_19
______GG____CC________AAAA__
50._SCA_19
______GG____CC________AAAA__
51._SCA_19
______GG____CC________AAAA__
52._SCA_11
______GG____CC________AAAA__
53._SCA_11
______GG____CC________AAAA__
54._SCA_11
______GG____CC________AAAA__
55._SCA_11
______GG____CC________AAAA__
56._SCA_11
______GG____CC________AAAA__
57._SCA_19
______GG____CC________AAAA__
58._SCA_11
______GG____CC________AAAA__
59._RUQ_46
__________GG________GG__AAGG
60._RUQ_234
__________CG________GG__AAGG
61._RUQ_46
______GG____CC________AAAA__
62._SCA_6
______GG____CC________AAAA__
63._SCA_19
______GG____CC________AAAA__
64._MARPER_44
______GGCC__CC________AA____
65._GC-04-003-1-03
TTAAAAGGCGCCCCCCAACCGGAAAAGG
66._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
67._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
1._GC-08-184-4-27
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
2._GC-08-184-4-27
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
3._GC-08-184-4-27
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
4._GC-08-184-4-27
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
5._GC-08-185-4-28
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
6._GC-08-185-4-28
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
7._GC-08-185-4-28
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
8._GC-08-185-4-28
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
9._GC-08-185-4-28
CCTTTTTTGGCGCCAAGGTTTTGGCCGG
10._U_12_[PER]
CCTT______CG__AAGG____GG____
11._U_12_[PER]
CCTT______CG__AAGG____GG____
12._U_12_[PER]
CCTT______CG__AAGG____GG____
13._U_12_[PER]
CCTT______CG__AAGG____GG____
14._U_12_[PER]
CCTT______CG__AAGG____GG____
15._U_12_[PER]
CCTT______CG__AAGG____GG____
16._U_12_[PER]
CCTT______CG__AAGG____GG____
17._U_12_[PER]
CCTT______CG__AAGG____GG____
18._U_12_[PER]
CCTT______CG__AAGG____GG____
19._U_12_[PER]
CCTT______CG__AAGG____GG____
20._U_12_[PER]
CCTT______CG__AAGG____GG____
21._SCA_11
CCTT______CG__AAGG____AG____
22._SCA_11
CCTT______CG__AAGG____AG____
23._SCA_11
CCTT______CG__AAGG____AG____
24._SCA_11
CCTT______CG__AAGG____AG____
25._SCA_11
CCTT______CG__AAGG____AG____
26._SCA_11
CCTT______CG__AAGG____AG____
27._SCA_11
CCTT______CG__AAGG____AG____
28._SCA_11
CCTT______CG__AAGG____AG____
29._SCA_11
CCTT______CG__AAGG____AG____
30._SCA_11
CCTT______CG__AAGG____AG____
31._SCA_11
CCTT______CG__AAGG____AG____
32._SCA_11
CCTT______CG__AAGG____AG____
33._SCA_11
CCTT______CG__AAGG____AG____
34._SCA_11
CCTT______CG__AAGG____AG____
35._SCA_11
CCTT______CG__AAGG____AG____
36._SCA_11
CCTT______CG__AAGG____AG____
37._SCA_11
CCTT______CG__AAGG____AG____
38._SCA_11
CCTT______CG__AAGG____AG____
39._SCA_11
CCTT______CG__AAGG____AG____
40._SCA_11
CCTT______CG__AAGG____AG____
41._SCA_19
CCTT______CC__AAGG____AG____
42._SCA_19
CCTT______CC__AAGG____AG____
43._SCA_19
CCTT______CC__AAGG____AG____
44._SCA_19
CCTT______CC__AAGG____AG____
45._SCA_19
CCTT______CC__AAGG____AG____
46._SCA_19
CCTT______CC__AAGG____AG____
47._SCA_19
CCTT______CC__AAGG____AG____
48._SCA_19
CCTT______CC__AAGG____AG____
49._SCA_19
CCTT______CC__AAGG____AG____
50._SCA_19
CCTT______CC__AAGG____AG____
51._SCA_19
CCTT______CC__AAGG____AG____
52._SCA_11
CCTT______CG__AAGG____AG____
53._SCA_11
CCTT______CG__AAGG____AG____
54._SCA_11
CCTT______CG__AAGG____AG____
55._SCA_11
CCTT______CG__AAGG____AG____
56._SCA_11
__TT______CG__AAGG____AG____
57._SCA_19
CCTT______CC__AAGG____AG____
58._SCA_11
__TT______CG__AAGG____AG____
59._RUQ_46
CC______GGCCCCAAGG____AGCC__
60._RUQ_234
CC______GGCGCCAAGG____AGCC__
61._RUQ_46
CCTT______CC__AAGG____AG____
62._SCA_6
CCTT______CG__AAGG____AG____
63._SCA_19
CCTT______CC__AAGG____AG____
64._MARPER_44
__TT______CG__AAGG____AG____
65._GC-04-003-1-03
CCTTTT__AGGGCCAAGG__TTAACCGG
66._GC-01-117-6-14
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
67._GC-08-157-3-56
CCTTTTTTGGCGCCAAGGTTTTAGCCGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGGTTTTGGAAAACCCCGGAGGGTTCC
1._GC-08-184-4-27
CCGGTTTTGGAAAACCCCGGAGGGTTCC
2._GC-08-184-4-27
CCGGTTTTGGAAAACCCCGGAGGGTTCC
3._GC-08-184-4-27
CCGGTTTTGGAAAACCCCGGAGGGTTCC
4._GC-08-184-4-27
CCGGTTTTGGAAAACCCCGGAGGGTTCC
5._GC-08-185-4-28
CCGGTTTTGGAAAACCCCGGAGGGTTCC
6._GC-08-185-4-28
CCGGTTTTGGAAAACCCCGGAGGGTTCC
7._GC-08-185-4-28
CCGGTTTTGGAAAACCCCGGAGGGTTCC
8._GC-08-185-4-28
CCGGTTTTGGAAAACCCCGGAGGGTTCC
9._GC-08-185-4-28
CCGGTTTTGGAAAACCCCGGAGGGTTCC
10._U_12_[PER]
______TT________________TTCC
11._U_12_[PER]
______TT________________TTCC
12._U_12_[PER]
______TT________________TTCC
13._U_12_[PER]
______TT________________TTCC
14._U_12_[PER]
______TT________________TTCC
15._U_12_[PER]
______TT________________TTCC
16._U_12_[PER]
______TT________________TTCC
17._U_12_[PER]
______TT________________TTCC
18._U_12_[PER]
______TT________________TTCC
19._U_12_[PER]
______TT________________TTCC
20._U_12_[PER]
______TT________________TTCC
21._SCA_11
______TT________________TTCC
22._SCA_11
______TT________________TTCC
23._SCA_11
______TT________________TTCC
24._SCA_11
______TT________________TTCC
25._SCA_11
______TT________________TTCC
26._SCA_11
______TT________________TTCC
27._SCA_11
______TT________________TTCC
28._SCA_11
______TT________________TTCC
29._SCA_11
______TT________________TTCC
30._SCA_11
______TT________________TTCC
31._SCA_11
______TT________________TTCC
32._SCA_11
______TT________________TTCC
33._SCA_11
______TT________________TTCC
34._SCA_11
______TT________________TTCC
35._SCA_11
______TT________________TTCC
36._SCA_11
______TT________________TTCC
37._SCA_11
______TT________________TTCC
38._SCA_11
______TT________________TTCC
39._SCA_11
______TT________________TTCC
40._SCA_11
______TT________________TTCC
41._SCA_19
______TT________________TTCC
42._SCA_19
______TT________________TTCC
43._SCA_19
______TT________________TTCC
44._SCA_19
______TT________________TTCC
45._SCA_19
______TT________________TTCC
46._SCA_19
______TT________________TTCC
47._SCA_19
______TT________________TTCC
48._SCA_19
______TT________________TTCC
49._SCA_19
______TT________________TTCC
50._SCA_19
______TT________________TTCC
51._SCA_19
______TT________________TTCC
52._SCA_11
______TT________________TTCC
53._SCA_11
______TT________________TTCC
54._SCA_11
______TT________________TTCC
55._SCA_11
______TT________________TTCC
56._SCA_11
______TT________________TTCC
57._SCA_19
______TT________________TTCC
58._SCA_11
______TT________________TTCC
59._RUQ_46
__GGTT____AA____________TT__
60._RUQ_234
__GGTT____AA____________TT__
61._RUQ_46
______TT________________TTCC
62._SCA_6
______TT________________TTCC
63._SCA_19
______TT________________TTCC
64._MARPER_44
______TT__________________CC
65._GC-04-003-1-03
CGGTTTTTGGAAAACC__GGAGGGTTCC
66._GC-01-117-6-14
CCGGTTTTGGAGAACCCCAAAAGGTTCC
67._GC-08-157-3-56
CCGGTTTTGGAGAACCCCAAAAGGTTCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGCCCCTTCCGGGGACAAGGGGAACC
1._GC-08-184-4-27
TTGGCCCCTTCCGGGGACAAGGGGAACC
2._GC-08-184-4-27
TTGGCCCCTTCCGGGGACAAGGGGAACC
3._GC-08-184-4-27
TTGGCCCCTTCCGGGGACAAGGGGAACC
4._GC-08-184-4-27
TTGGCCCCTTCCGGGGACAAGGGGAACC
5._GC-08-185-4-28
TTGGCCCCTTCCGGGGACAAGGGGAACC
6._GC-08-185-4-28
TTGGCCCCTTCCGGGGACAAGGGGAACC
7._GC-08-185-4-28
TTGGCCCCTTCCGGGGACAAGGGGAACC
8._GC-08-185-4-28
TTGGCCCCTTCCGGGGACAAGGGGAACC
9._GC-08-185-4-28
TTGGCCCCTTCCGGGGACAAGGGGAACC
10._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
11._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
12._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
13._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
14._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
15._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
16._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
17._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
18._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
19._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
20._U_12_[PER]
____CC__TTCCGG__ACAAGGGG____
21._SCA_11
____CC__TTCCCG__AAAAGGGG____
22._SCA_11
____CC__TTCCCG__AAAAGGGG____
23._SCA_11
____CC__TTCCCG__AAAAGGGG____
24._SCA_11
____CC__TTCCCG__AAAAGGGG____
25._SCA_11
____CC__TTCCCG__AAAAGGGG____
26._SCA_11
____CC__TTCCCG__AAAAGGGG____
27._SCA_11
____CC__TTCCCG__AAAAGGGG____
28._SCA_11
____CC__TTCCCG__AAAAGGGG____
29._SCA_11
____CC__TTCCCG__AAAAGGGG____
30._SCA_11
____CC__TTCCCG__AAAAGGGG____
31._SCA_11
____CC__TTCCCG__AAAAGGGG____
32._SCA_11
____CC__TTCCCG__AAAAGGGG____
33._SCA_11
____CC__TTCCCG__AAAAGGGG____
34._SCA_11
____CC__TTCCCG__AAAAGGGG____
35._SCA_11
____CC__TTCCCG__AAAAGGGG____
36._SCA_11
____CC__TTCCCG__AAAAGGGG____
37._SCA_11
____CC__TTCCCG__AAAAGGGG____
38._SCA_11
____CC__TTCCCG__AAAAGGGG____
39._SCA_11
____CC__TTCCCG__AAAAGGGG____
40._SCA_11
____CC__TTCCCG__AAAAGGGG____
41._SCA_19
____CC__TTCCCG__ACAAGGGG____
42._SCA_19
____CC__TTCCCG__ACAAGGGG____
43._SCA_19
____CC__TTCCCG__ACAAGGGG____
44._SCA_19
____CC__TTCCCG__ACAAGGGG____
45._SCA_19
____CC__TTCCCG__ACAAGGGG____
46._SCA_19
____CC__TTCCCG__ACAAGGGG____
47._SCA_19
____CC__TTCCCG__ACAAGGGG____
48._SCA_19
____CC__TTCCCG__ACAAGGGG____
49._SCA_19
____CC__TTCCCG__ACAAGGGG____
50._SCA_19
____CC__TTCCCG__ACAAGGGG____
51._SCA_19
____CC__TTCCCG__ACAAGGGG____
52._SCA_11
____CC__TTCCCG__AAAAGGGG____
53._SCA_11
____CC__TTCCCG__AAAAGGGG____
54._SCA_11
____CC__TTCCCG__AAAA__GG____
55._SCA_11
____CC__TTCCCG__AAAAGGGG____
56._SCA_11
____CC__TTCCCG__AAAAGGGG____
57._SCA_19
____CC__TTCCCG__ACAA__GG____
58._SCA_11
____CC__TTCCCG__AAAAGGGG____
59._RUQ_46
TTGGCCCCTTCC__GGCCAAGGGGAA__
60._RUQ_234
TT__CCCCCTCC__GGCCAAGGGGAA__
61._RUQ_46
____CC__TTCCCG__ACAAGGGG____
62._SCA_6
____CC__TTCCCC__ACAAGGGG____
63._SCA_19
____CC__TTCCCG__ACAAGGGG____
64._MARPER_44
________TT________AA__GG____
65._GC-04-003-1-03
TTGGCGCCTTCCGGGGAAAAGGGGAACC
66._GC-01-117-6-14
TT__CCCCTTCCCGGGAAAAGGGGAACT
67._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAACTCCGGCCCCACCCCCAACCTTCC
1._GC-08-184-4-27
CCAACTCCGGCCCCACCCCCAACCTTCC
2._GC-08-184-4-27
CCAACTCCGGCCCCACCCCCAACCTTCC
3._GC-08-184-4-27
CCAACTCCGGCCCCACCCCCAACCTTCC
4._GC-08-184-4-27
CCAACTCCGGCCCCACCCCCAACCTTCC
5._GC-08-185-4-28
CCAACTCCGGCCCCACCCCCAACCTTCC
6._GC-08-185-4-28
CCAACTCCGGCCCCACCCCCAACCTTCC
7._GC-08-185-4-28
CCAACTCCGGCCCCACCCCCAACCTTCC
8._GC-08-185-4-28
CCAACTCCGGCCCCACCCCCAACCTTCC
9._GC-08-185-4-28
CCAACTCCGGCCCCACCCCCAACCTTCC
10._U_12_[PER]
__AACT________ACCC______TTCC
11._U_12_[PER]
__AACT________ACCC______TTCC
12._U_12_[PER]
__AACT________ACCC______TTCC
13._U_12_[PER]
__AACT________ACCC______TTCC
14._U_12_[PER]
__AACT________ACCC______TTCC
15._U_12_[PER]
__AACT________ACCC______TTCC
16._U_12_[PER]
__AACT________ACCC______TTCC
17._U_12_[PER]
__AACT________ACCC______TTCC
18._U_12_[PER]
__AACT________ACCC______TTCC
19._U_12_[PER]
__AACT________ACCC______TTCC
20._U_12_[PER]
__AACT________ACCC______TTCC
21._SCA_11
__AACT________AACC______TTCC
22._SCA_11
__AACT________AACC______TTCC
23._SCA_11
__AACT________AACC______TTCC
24._SCA_11
__AACT________AACC______TTCC
25._SCA_11
__AACT________AACC______TTCC
26._SCA_11
__AACT________AACC______TTCC
27._SCA_11
__AACT________AACC______TTCC
28._SCA_11
__AACT________AACC______TTCC
29._SCA_11
__AACT________AACC______TTCC
30._SCA_11
__AACT________AACC______TTCC
31._SCA_11
__AACT________AACC______TTCC
32._SCA_11
__AACT________AACC______TTCC
33._SCA_11
__AACT________AACC______TTCC
34._SCA_11
__AACT________AACC______TTCC
35._SCA_11
__AACT________AACC______TTCC
36._SCA_11
__AACT________AACC______TTCC
37._SCA_11
__AACT________AACC______TTCC
38._SCA_11
__AACT________AACC______TTCC
39._SCA_11
__AACT________AACC______TTCC
40._SCA_11
__AACT________AACC______TTCC
41._SCA_19
__AACT________AACC______TTCC
42._SCA_19
__AACT________AACC______TTCC
43._SCA_19
__AACT________AACC______TTCC
44._SCA_19
__AACT________AACC______TTCC
45._SCA_19
__AACT________AACC______TTCC
46._SCA_19
__AACT________AACC______TTCC
47._SCA_19
__AACT________AACC______TTCC
48._SCA_19
__AACT________AACC______TTCC
49._SCA_19
__AACT________AACC______TTCC
50._SCA_19
__AACT________AACC______TTCC
51._SCA_19
__AACT________AACC______TTCC
52._SCA_11
__AACT________AACC______TTCC
53._SCA_11
__AACT________AACC______TTCC
54._SCA_11
__AACT________AACC______TTCC
55._SCA_11
__AACT________AACC______TTCC
56._SCA_11
__AACT________AACC______TTCC
57._SCA_19
__AACT________AACC______TTCC
58._SCA_11
__AA__________AACC______TTCC
59._RUQ_46
______________AACC____CCTT__
60._RUQ_234
______________AACC____CCTT__
61._RUQ_46
__AGCT________AACC______TTCC
62._SCA_6
__AGCT________AACC______TTCC
63._SCA_19
__AGCT________AACC______TTCC
64._MARPER_44
__AG__________AACC______TTCC
65._GC-04-003-1-03
CCAATTCCGGCCCCAACCCCAACCTTCT
66._GC-01-117-6-14
CCAACTCCGGCCCCAACCCCAACCTTCC
67._GC-08-157-3-56
CCAACTCCGGCCCCAACCCCAACCTTCC
 85 86 87 88 89 90 91 92       
_Input profile
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
1._GC-08-184-4-27
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
2._GC-08-184-4-27
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
3._GC-08-184-4-27
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
4._GC-08-184-4-27
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
5._GC-08-185-4-28
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
6._GC-08-185-4-28
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
7._GC-08-185-4-28
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
8._GC-08-185-4-28
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
9._GC-08-185-4-28
CCCCGGCCCTCCTTGGX_XX_XX_XX_XX_XX_X
10._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
11._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
12._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
13._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
14._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
15._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
16._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
17._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
18._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
19._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
20._U_12_[PER]
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
21._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
22._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
23._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
24._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
25._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
26._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
27._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
28._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
29._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
30._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
31._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
32._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
33._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
34._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
35._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
36._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
37._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
38._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
39._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
40._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
41._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
42._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
43._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
44._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
45._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
46._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
47._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
48._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
49._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
50._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
51._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
52._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
53._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
54._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
55._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
56._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
57._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
58._SCA_11
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
59._RUQ_46
____GGCCCT______X_XX_XX_XX_XX_XX_X
60._RUQ_234
____GGCCCT______X_XX_XX_XX_XX_XX_X
61._RUQ_46
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
62._SCA_6
CC__GG__TTCC____X_XX_XX_XX_XX_XX_X
63._SCA_19
CC__GG__CTCC____X_XX_XX_XX_XX_XX_X
64._MARPER_44
____GG__TT______X_XX_XX_XX_XX_XX_X
65._GC-04-003-1-03
CCCCGGCCTTCCTTGGX_XX_XX_XX_XX_XX_X
66._GC-01-117-6-14
CCCCGGCCTTCCTTGGX_XX_XX_XX_XX_XX_X
67._GC-08-157-3-56
CCCCGGCCTTCCTTGGX_XX_XX_XX_XX_XX_X

Input profile: U_12_[PER] GC-08-184-4-27

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

1._U_12_[PER] GC-08-184-4-27

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._U_12_[PER] GC-08-184-4-27

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

3._U_12_[PER] GC-08-184-4-27

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

4._U_12_[PER] GC-08-184-4-27

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

5._U_12_[PER] GC-08-185-4-28

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._U_12_[PER] GC-08-185-4-28

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._U_12_[PER] GC-08-185-4-28

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

8._U_12_[PER] GC-08-185-4-28

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._U_12_[PER] GC-08-185-4-28

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

10._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8427 1
 Dapeng Zhang, 2016

11._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8427 2
 Dapeng Zhang, 2016

12._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8427 4
 Dapeng Zhang, 2016

13._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8427 5
 Dapeng Zhang, 2016

14._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8427 7
 Dapeng Zhang, 2016

15._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8428 2
 Dapeng Zhang, 2016

16._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8428 3
 Dapeng Zhang, 2016

17._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8428 4
 Dapeng Zhang, 2016

18._U_12_[PER]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8428 5
 Dapeng Zhang, 2016

19._U_12_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8428 7
 Dapeng Zhang, 2016

20._U_12_[PER]

identical
38 shared markers

Universidad Nacional Agraria de la Selva (UNAS), Peru
 Dapeng Zhang, 2016

21._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 13
 Dapeng Zhang, 2016

22._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 1 > FP
 Dapeng Zhang, 2016

23._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 10 > F
 Dapeng Zhang, 2016

24._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 2 > FP
 Dapeng Zhang, 2016

25._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 3 > FP
 Dapeng Zhang, 2016

26._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 3
 Dapeng Zhang, 2016

27._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 4
 Dapeng Zhang, 2016

28._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 5
 Dapeng Zhang, 2016

29._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 6
 Dapeng Zhang, 2016

30._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 8
 Dapeng Zhang, 2016

31._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 9
 Dapeng Zhang, 2016

32._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 10
 Dapeng Zhang, 2016

33._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 11
 Dapeng Zhang, 2016

34._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 14
 Dapeng Zhang, 2016

35._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 19
 Dapeng Zhang, 2016

36._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 20
 Dapeng Zhang, 2016

37._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 23
 Dapeng Zhang, 2016

38._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 24
 Dapeng Zhang, 2016

39._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 25
 Dapeng Zhang, 2016

40._SCA_11

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 26
 Dapeng Zhang, 2016

41._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 1
 Dapeng Zhang, 2016

42._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 2
 Dapeng Zhang, 2016

43._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 5
 Dapeng Zhang, 2016

44._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 7
 Dapeng Zhang, 2016

45._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 10
 Dapeng Zhang, 2016

46._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 13
 Dapeng Zhang, 2016

47._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 14
 Dapeng Zhang, 2016

48._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 15
 Dapeng Zhang, 2016

49._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 12 > F
 Dapeng Zhang, 2016

50._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 4 > FP
 Dapeng Zhang, 2016

51._SCA_19

92.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 6 > FP
 Dapeng Zhang, 2016

52._SCA_11

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1614 9
 Dapeng Zhang, 2016

53._SCA_11

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 1
 Dapeng Zhang, 2016

54._SCA_11

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 2
 Dapeng Zhang, 2016

55._SCA_11

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 15
 Dapeng Zhang, 2016

56._SCA_11

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 18
 Dapeng Zhang, 2016

57._SCA_19

92.1 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3104 11
 Dapeng Zhang, 2016

58._SCA_11

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8356 13
 Dapeng Zhang, 2016

59._SCA_19 RUQ_46

91.5 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

60._SCA_6 RUQ_234

91.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

61._SCA_19 RUQ_46

91 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

62._SCA_6

91 %
39 shared markers

Indonesian Coffee and Cocoa Research Institute (ICCRI), Indonesia
Location: KW 268 I-022
 Dapeng Zhang, 2016

63._SCA_19

91 %
39 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 748
 Dapeng Zhang, 2016

64._MARPER_44

90.7 %
27 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER
 Dapeng Zhang, 2014

65._U_18_[PER] GC-04-003-1-03

90.4 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP2
 Mars, 2018

66._SCA_11 GC-01-117-6-14

90.1 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

67._SCA_11 GC-08-157-3-56

90.1 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 26
Notes: 26
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1414
91TcSNP154 92TcSNP240