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EBC 6 /S-401    Theobroma cacao

 Colombia - ICA Palmira (1989)
? A catalogue of the cacao germplasm at ICA Palmira. F. Ocampo Rojas, ICA Palmira, Colombia.

Derivation: Expedicion Botanico Caqueta.
Location: Colombia.

Notes:  Bartley, 1998a [BAR98A]. Seedling progenies are identifed by the suffix /s2, /s3. The numbers in the suffix of the seedling material relates to the genebank/quarantine station where the seedling material was originally sent as follows:

s1,s2... in San Carlos genebank, Ecuador,

s101,s102... at Kew (and moved to Trinidad),

s201,s202... at USDA Miami quarantine station,

s301,s302... at Barbados quarantine station.


 

 Jaime A Osorio-Guarín, Jhon A Berdugo-Cely, Roberto A Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng (2020)
Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.). G3 Genes|Genomes|Genetics, Volume 10, Issue 5, Pages 1713–1725

Derivation: Botanical Expedition of Caqueta.
Location: Colombia.

 COLLECTION DETAILS

Location: R. Caqueta, Amazonas, Colombia (primary forest)
Date: 23 May 1984
Coordinates: 72.10 W, 0.33 S
Material collected: Seed
Altitude: 100 m
Notes: Isla Clemencia
Expedition Code: 85CO
   Allen, J.B., 1987

 PEDIGREE DETAILS

 Parents:
EBC 6  x Unknown   Bartley, B.G.D., 1998

 GENOME/TRANSCRIPTOME DATA LINKS

 Xavier Argout et al., 2023
 Reference
BioProject: PRJNA880462   NCBI   ENA FASTQ 
Library Source: Genomic
 
Run: SRR21562174   NCBI   ENA FASTQ 
Experiment: SRX17564405
BioSample: SAMN30841409
SampleName: EBC_6_401

 HELD IN

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List received in 1989   Reference
• Local Name: EBC 6 /S-401
   - Year of Accession: 1989
List received in 2012   Reference
• Local Name: EBC 6/s401
   - Year of Accession: 1993
List received in 2012   Reference
• Local Name: EBC 6/S401

Colombia - ICA Palmira (1989) ? A catalogue of the cacao germplasm at ICA Palmira. F. Ocampo Rojas, ICA Palmira, Colombia.
Jaime A Osorio-Guarín, Jhon A Berdugo-Cely, Roberto A Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng (2020) Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.). G3 Genes|Genomes|Genetics, Volume 10, Issue 5, Pages 1713–1725
Allen, J.B. (1987) London Cocoa Trade Amazon Project. Final Report Phase 2. Cocoa Growers' Bulletin (Cadbury Schweppes plc, Birmingham, U.K.) 39: pp. 1-94.
Bartley, B.G.D. (1998) Comments made by Dr. Bartley during his visit to Reading (19th - 31st July 1998). B.G.D. Bartley. Personal Communications.
Xavier Argout, Gaetan Droc, Olivier Fouet, Mathieu Rouard, Karine Labadie, Bénédicte Rhoné, Gaston Rey Loor & Claire Lanaud (2023) Pangenomic exploration of Theobroma cacao: New Insights into Gene Content Diversity and Selection During Domestication. bioRxiv preprint
Cote d'Ivoire - IRCC (1989) Liste des clones en collection. Unpublished Report, IRCC Bingerville, Cote d'Ivoire, Doc. No. 192. D. Clement, IRCC, Cote d'Ivoire. Personal Communication.
Philippe Lachenaud (2012) CIRAD Montpellier Clone List (Excel Spreadsheet). Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.
Philippe Lachenaud (2012) F. Guiana database, CIRAD-CP. Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.