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M 7 [IDN]    Theobroma cacao

 McMahon, Peter J, A Iswanto, Agung W Susilo, E Sulistyowati, A Wahab, M Imron, & A Purwantara (2009)
On-Farm Selection for Quality and Resistance to Pest/Diseases of Cocoa in Sulawesi: (I) Performance of Selections against Cocoa Pod Borer, Conopomorpha Cramerella. International Journal of Pest Management 55 (4): 325–37

Location: Farm, Maluku, Indonesia.

Notes:  Selections made as part of Mars-ACIAR project (2001-2006) using farmer-participatory methodology to select and test promising cocoa genotypes on farms in Sulawesi, Indonesia. Selected for CPB resistance.
 

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Synonyms: M07 [IDN]

 Parents:
Interpopulation hybrid x Unknown
 - With NA 226 in pedigree
 - likelihood-based parentage analysis using 15 SSR markers and 153 international reference types
   Dinarti, D et al., 2015

 GENOME/TRANSCRIPTOME DATA LINKS

 Cornejo, O.E. et al., 2018
 Reference
BioProject: PRJNA486011   NCBI   ENA FASTQ 
Project: PRJEB28591   EVA (project)   EVA (analysis) 
Library Source: Genomic
 
Run: SRR7774261   NCBI   ENA FASTQ 
Experiment: SRX4629563
BioSample: SAMN09934491
SampleName: M07
SampleSource: Indonesia (gDNA USDA)

McMahon, Peter J, A Iswanto, Agung W Susilo, E Sulistyowati, A Wahab, M Imron, & A Purwantara (2009) On-Farm Selection for Quality and Resistance to Pest/Diseases of Cocoa in Sulawesi: (I) Performance of Selections against Cocoa Pod Borer, Conopomorpha Cramerella. International Journal of Pest Management 55 (4): 325–37
Dinarti, D, Agung W Susilo, Lyndel W Meinhardt, K Ji, Lambert A Motilal, S Mischke, & Dapeng Zhang (2015) Genetic Diversity and Parentage in Farmer Selections of Cacao from Southern Sulawesi, Indonesia Revealed by Microsatellite Markers. Breeding Science 65 (5): 438–46
Cornejo, O.E., Muh-Ching Yee, Victor Dominguez, Mary Andrews, Alexandra Sockell, Erika Strandberg, Donald Livingstone III, Conrad Stack, Alberto Romero, Pathmanathan Umaharan, Stefan Royaert, Nilesh R. Tawari, Pauline Ng, Osman Gutierrez, Wilbert Phillips, Keithanne Mockaitis, Carlos D. Bustamante & Juan C. Motamayor (2018) Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process. Commun Biol 1, 167