SNP Profiles of DOM 4   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._DOM 4___
TTCC_________CC___CCTT____________TT
2._DOM 4___
______GGCCTT___GG______GGAACCGG___
3._DOM 4___
______________________________TTCC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._DOM 4___
TTCC____________CCGG___TT___AG______
2._DOM 4___
___CCAAGGTTGG______AA___GGAGGGAG
3._DOM 4___
___CCTTCC___GG______AA___CCAG___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._DOM 4___
AA___GGAA____________CT_______________
2._DOM 4___
___ATGG___GGAAAAGG___GGATGG___AA
3._DOM 4___
______GG___GGAA_______________CCAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._DOM 4___
CC___CTACGG_________CGTTCCTT___TT
2._DOM 4___
___CC___CC___GGAAAACG___CCAAAA___
3._DOM 4___
_________CC______TT___CG___CCTTTT___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._DOM 4___
AACCAA___GG___TTGTGGTT_________TT
2._DOM 4___
_________AG___AA___ACGG___AAAAAA___
3._DOM 4___
__________________TTGTGG_________TT___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._DOM 4___
CCAATT___GG_________AG_________CC___
2._DOM 4___
CC___CCGGCC___GGGGAGAAGGGG___AA
3._DOM 4___
CC_________GGCCCC_____________________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1._DOM 4___
___AATTCCAA___CT___AA____________TT
2._DOM 4___
AAAA_________AA___GGAACCAAGGAG___
3._DOM 4___
___AATT____________CC___GG______AG___
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1._DOM 4___
___TT_________TTAACTTT___TTTT______
2._DOM 4___
______AAAACC_________AAGG______AAAA
3._DOM 4___
TT_____________________TT_________TT___
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1._DOM 4___
___GGGG_________GG______TTTT_________
2._DOM 4___
GG______AAAAAGCCAAAA______CCACAA
3._DOM 4___
____________TTCTGGAA__________________
 127              
1._DOM 4___
___X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._DOM 4___
AAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._DOM 4___
___X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._DOM_4 RUQ 544

 Lambert Motilal, 2023
Population Assignment: 

2._DOM_4 RUQ 544

Notes: Reading_Collection
 Mars, 2018

3._DOM_4 RUQ 544

 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP305 30TcSNP316
31TcSNP329 32TcSNP363 33TcSNP364 34TcSNP372 35TcSNP413
36TcSNP418 37TcSNP421 38TcSNP429 39TcSNP430 40TcSNP448
41TcSNP469 42TcSNP497 43TcSNP519 44TcSNP521 45TcSNP522
46TcSNP529 47TcSNP546 48TcSNP547 49TcSNP560 50TcSNP561
51TcSNP577 52TcSNP589 53TcSNP591 54TcSNP602 55TcSNP619
56TcSNP640 57TcSNP642 58TcSNP644 59TcSNP645 60TcSNP653
61TcSNP660 62TcSNP689 63TcSNP702 64TcSNP723 65TcSNP731
66TcSNP739 67TcSNP751 68TcSNP776 69TcSNP799 70TcSNP800
71TcSNP823 72TcSNP835 73TcSNP836 74TcSNP860 75TcSNP872
76TcSNP878 77TcSNP891 78TcSNP894 79TcSNP899 80TcSNP917
81TcSNP929 82TcSNP944 83TcSNP945 84TcSNP953 85TcSNP994
86TcSNP998 87TcSNP999 88TcSNP1010 89TcSNP1019 90TcSNP1034
91TcSNP1053 92TcSNP1060 93TcSNP1062 94TcSNP1063 95TcSNP1075
96TcSNP1096 97TcSNP1111 98TcSNP1112 99TcSNP1126 100TcSNP1144
101TcSNP1149 102TcSNP1156 103TcSNP1175 104TcSNP1205 105TcSNP1230
106TcSNP1237 107TcSNP1253 108TcSNP1270 109TcSNP1275 110TcSNP1293
111TcSNP1309 112TcSNP1350 113TcSNP1383 114TcSNP1401 115TcSNP1404
116TcSNP1414 117TcSNP1439 118TcSNP1442 119TcSNP1458 120TcSNP1484
121TcSNP1520 122TcSNP1524 123TcSNP1527 124Tcm001s00947643 125Tcm003s01336581
126Tcm003s07402719 127Tcm006s26664133