SNP Profiles of "FSC 13"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_1535
__________________________________________
2. _RUQ_1535
CTCC_________CT___ACGG____________TT
3. _RUQ_1535
______GGCCTT___GG______GGAACCAA___
4. _RUQ_1535
______________________________CTAC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_1535
___AC___CC___GG______AA___GGAG______
2. _RUQ_1535
ATAC____________CCGG___GG___AG______
3. _RUQ_1535
___CCAAGGTTGG______AA___GGAAGGGG
4. _RUQ_1535
___ACGTCC___GG______AA___CCAG___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_1535
_______________GGATCT____________CG___
2. _RUQ_1535
TTCC___AGAA____________CC____________
3. _RUQ_1535
______TTGG___GGAAAAGG___GGTTGG___
4. _RUQ_1535
_________AG___GGAT_______________CGAG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_1535
______________________________CC___AACC
2. _RUQ_1535
___AC___CTAC___AA_________CCATAACC
3. _RUQ_1535
AA___CC___CC______GGAAAAGG___AAAA
4. _RUQ_1535
____________ACCT______GG___CC___AACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_1535
AG____________________________________GT
2. _RUQ_1535
______TTAACCAG___CG___TTGGAGCT___
3. _RUQ_1535
___AA____________GG___AA___CCGG___AA
4. _RUQ_1535
___CC_____________________TTGGAG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_1535
__________________AGGGGGCT____________
2. _RUQ_1535
______TTACAATT___CC_________AG______
3. _RUQ_1535
AAAA___AA___CCGGCC___GGGGGGAAGG
4. _RUQ_1535
___TT___AC_________CCCCCT____________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_1535
_________CT_______________CG___CT______
2. _RUQ_1535
___CC______AGCTCTAA______CC___AG___
3. _RUQ_1535
GG___AAAAAA_________AA______GGAACC
4. _RUQ_1535
____________AG__________________CT___GT
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_1535
______AG___AT___________________________
2. _RUQ_1535
_________TT___CT_________GTAATT___GG
3. _RUQ_1535
AAGGAA_________AAAACC______AAGG___
4. _RUQ_1535
______AG___AT__________________TT______
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _RUQ_1535
_____________________CT___CC____________
2. _RUQ_1535
AT_________AGGG_________GG______TTAT
3. _RUQ_1535
___AAAAGG______AAAAGGCCAAAA______
4. _RUQ_1535
___TT_______________CTCTGGAG_________
 127 128 129 130           
1. _RUQ_1535
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_1535
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_1535
CCAAAAAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_1535
____________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._FSC_13 RUQ 1535
 Jocelyn De Wever et al., 2019
2._FSC_13 RUQ 1535
 Lambert Motilal, 2023
Population Assignment: 
3._FSC_13 RUQ 1535
Notes: Reading_Collection
 Mars, 2018
4._FSC_13 RUQ 1535
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1253
111TcSNP1270 112TcSNP1275 113TcSNP1293 114TcSNP1309 115TcSNP1350
116TcSNP1383 117TcSNP1401 118TcSNP1404 119TcSNP1414 120TcSNP1439
121TcSNP1442 122TcSNP1458 123TcSNP1484 124TcSNP1520 125TcSNP1524
126TcSNP1527 127Tcm001s00947643 128Tcm003s01336581 129Tcm003s07402719 130Tcm006s26664133