SNP Profiles of "EET 397 [ECU]"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
2. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
3. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
4. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
5. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
6. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
7. _GC-08-274-8-46
______CGGTAA___AG______CCTTACCT___
8. _8846_1
______CG___AA___________________________
9. _8846_2
______CG___AA___________________________
10. _8846_4
______CG___AA___________________________
11. _8846_5
______CG___AA___________________________
12. _8846_6
______CG___AA___________________________
13. _8846_7
______CG___AA___________________________
14. _8846_9
______CG___AA___________________________
15. _RUQ_759
CTAA_________CT___CCTT____________TT
16. _RUQ_759
CTAA_________CT___CCTT____________TT
17. _RUQ_759
______CGACAA___AG______GGAAACAG___
18. _RUQ_759
______________________________TT_________
19. _RUQ_759
______CG___AA___________________________
20. _6B_F456_T11
______CG___AA___________________________
21. _EET_397_[ECU]_Fld#_117_Plt#_2
______CGACAA___AG______GGAAACAG___
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
2. _GC-08-274-8-46
___ACGGTTATGG______CC___CC___GGCT
3. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
4. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
5. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
6. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
7. _GC-08-274-8-46
___ACGGTTATGG______CC___CCAAGGCT
8. _8846_1
___ACGGTT____________CC___CCAA___CT
9. _8846_2
___ACGGTT____________CC___CC______CT
10. _8846_4
___ACGGTT____________CC___CCAA___CT
11. _8846_5
___ACGGTT____________CC___CCAA___CT
12. _8846_6
___ACGGTT____________CC___CCAA___CT
13. _8846_7
___ACGGTT____________CC___CCAA___CT
14. _8846_9
___ACGGTT____________CC___CCAA___CT
15. _RUQ_759
AAAC____________TTAA___GG___AA______
16. _RUQ_759
AAAC____________TTAA___GG___AA______
17. _RUQ_759
___ACCCAAATGG______CC___GGAAGGAG
18. _RUQ_759
___CCGG______GG______CC___CCAA___CT
19. _RUQ_759
___ACGGTT____________CC___CCAA___CT
20. _6B_F456_T11
___ACGGTT____________CC______AA___CT
21. _EET_397_[ECU]_Fld#_117_Plt#_2
___ACCCAAATGG______CC___GGAAGGAG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
2. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
3. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
4. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
5. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
6. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
7. _GC-08-274-8-46
______ATGG___GGATCCAA___GGAACGAG
8. _8846_1
__________________AT_________GG______AG
9. _8846_2
__________________AT_________GG______AG
10. _8846_4
__________________AT_________GG______AG
11. _8846_5
__________________AT_________GG______AG
12. _8846_6
__________________AT_________GG______AG
13. _8846_7
__________________AT_________GG______AG
14. _8846_9
__________________AT_________GG______AG
15. _RUQ_759
CTAA___GGAC____________CC____________
16. _RUQ_759
CTAA___GGAC____________CC____________
17. _RUQ_759
______ATGG___GGATGGAA___GGAACG___
18. _RUQ_759
_________GG______TT_______________CCAG
19. _RUQ_759
__________________AT_________GG______AG
20. _6B_F456_T11
__________________AT_________AG______AG
21. _EET_397_[ECU]_Fld#_117_Plt#_2
______ATGG___GGATGGAA___GGAACG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
2. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
3. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
4. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
5. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
6. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
7. _GC-08-274-8-46
______AC___AACC___AAGGGGCG___CCCT
8. _8846_1
____________AACC______GG___CG___CC___
9. _8846_2
____________AACC______GG___CG___CC___
10. _8846_4
____________AACC______GG___CG___CC___
11. _8846_5
____________AACC______GG___CG___CC___
12. _8846_6
____________AACC______GG___CG___CC___
13. _8846_7
____________AACC______GG___CG___CC___
14. _8846_9
____________AACC______GG___CG___CC___
15. _RUQ_759
___AC___CCAA___AG_________CGAACCCT
16. _RUQ_759
___AC___CCAA___AG_________CGAACCCT
17. _RUQ_759
GG___AC___AA______AACCGGCG___CCAG
18. _RUQ_759
____________AACC______GG___CG______CT
19. _RUQ_759
____________AACC______GG___CG___CC___
20. _6B_F456_T11
____________AACC______GG___CG___CC___
21. _EET_397_[ECU]_Fld#_117_Plt#_2
GG___AC___AA______AACCGGCG___CCAG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-08-274-8-46
AGTT_________AAAA___AGTTTTGGAA___
2. _GC-08-274-8-46
AGTT_________AAAA___AGTTTTGGAA___
3. _GC-08-274-8-46
AGTT_________AAAA___AGTTTTGGAA___
4. _GC-08-274-8-46
AGTT_________AAAA______TTTTGGAA___
5. _GC-08-274-8-46
AGTT_________AAAA______TTTTGGAA___
6. _GC-08-274-8-46
AGTT_________AAAA___AGTTTTGGAA___
7. _GC-08-274-8-46
AGTT_________AAAA______TTTTGGAA___
8. _8846_1
___TT_________AA_______________GG______
9. _8846_2
___TT_________AA_______________GG______
10. _8846_4
___TT_________AA_______________GG______
11. _8846_5
___TT_________AA_______________GG______
12. _8846_6
___TT_________AA_______________GG______
13. _8846_7
___TT_________AA_______________GG______
14. _8846_9
___TT_________AA_______________GG______
15. _RUQ_759
______TTAGCCAG___CG______TTGGAACC
16. _RUQ_759
______TTAGCCAG___CG______TTGGAACC
17. _RUQ_759
___AA____________AA___AA______CCAA___
18. _RUQ_759
___TT___________________________GGAA___
19. _RUQ_759
___TT_________AG_______________GG______
20. _6B_F456_T11
___TT_________AG_______________GG______
21. _EET_397_[ECU]_Fld#_117_Plt#_2
___AA____________AA___AA______CCAA___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
2. _GC-08-274-8-46
___GTTT___CC___CCAACGGGCTCGAGCT
3. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
4. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
5. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
6. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
7. _GC-08-274-8-46
TTGTTT___CC___CCAACGGGCTCGAGCT
8. _8846_1
________________________CG___CT______CT
9. _8846_2
________________________CG___CT______CT
10. _8846_4
________________________CG___CT______CT
11. _8846_5
________________________CG___CT______CT
12. _8846_6
________________________CG___CT______CT
13. _8846_7
________________________CG___CT______CT
14. _8846_9
________________________CG___CT______CT
15. _RUQ_759
_________TTCCATCT___CG_________AG___
16. _RUQ_759
_________TTCCATCT___CG_________AG___
17. _RUQ_759
AAACAA___CC___GGAGCG___AGCGAGAG
18. _RUQ_759
______TT___CC_________CGGGCT_________
19. _RUQ_759
________________________CG___CT______CT
20. _6B_F456_T11
________________________CG___CT______CT
21. _EET_397_[ECU]_Fld#_117_Plt#_2
AAACAA___CC___GGAGCG___AGCGAGAG
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
2. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
3. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
4. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
5. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
6. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
7. _GC-08-274-8-46
CGCT___ATCTAACC______TTCC___CCGG
8. _8846_1
CG______ATCTAA__________________CCGG
9. _8846_2
CG______ATCTAA__________________CCGG
10. _8846_4
CG______ATCTAA__________________CCGG
11. _8846_5
CG______ATCTAA__________________CCGG
12. _8846_6
CG______ATCTAA__________________CCGG
13. _8846_7
CG______ATCTAA__________________CCGG
14. _8846_9
CG______ATCTAA__________________CCGG
15. _RUQ_759
______CG______AACCCTAA______CC___GG
16. _RUQ_759
______CG______AACCCTAA______CC___GG
17. _RUQ_759
CGAG___ATAGAA_________AA______GGGG
18. _RUQ_759
_______________AACC_______________CC___
19. _RUQ_759
CG______ATCTAA__________________CCGG
20. _6B_F456_T11
CG______ATCTAA__________________CCGG
21. _EET_397_[ECU]_Fld#_117_Plt#_2
CGAG___ATAGAA_________AA______GGGG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
2. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
3. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
4. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
5. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
6. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
7. _GC-08-274-8-46
GTATTTGG___ATCCCCCTCTTT______CC
8. _8846_1
___AT____________CC______CT____________
9. _8846_2
___AT____________CC______CT____________
10. _8846_4
___AT____________CC______CT____________
11. _8846_5
___AT____________CC______CT____________
12. _8846_6
___AT____________CC______CT____________
13. _8846_7
___AT____________CC______CT____________
14. _8846_9
___AT____________CC______CT____________
15. _RUQ_759
____________CT___CC____________GGAA___
16. _RUQ_759
____________CT___CC____________GGAA___
17. _RUQ_759
ACATAAGG_________GGAG___AA_________
18. _RUQ_759
_________GG___AT________________________
19. _RUQ_759
___AT____________CC______CT____________
20. _6B_F456_T11
___AT____________CC______CT____________
21. _EET_397_[ECU]_Fld#_117_Plt#_2
ACATAAGG_________GGAG___AA_________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
2. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
3. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
4. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
5. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
6. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
7. _GC-08-274-8-46
GGCT______TTCCAG______CCCCTTCCGG
8. _8846_1
GGCT_________CC_________CC___TTCCGG
9. _8846_2
GGCT_________CC_________CC___TTCCGG
10. _8846_4
GGCT_________CC_________CC___TTCCGG
11. _8846_5
GGCT_________CC_________CC___TTCCGG
12. _8846_6
GGCT_________CC_________CC___TTCCGG
13. _8846_7
GGCT_________CC_________CC___TTCCGG
14. _8846_9
GGCT_________CC_________CC___TTCCGG
15. _RUQ_759
GG___GGTT____________AG_________CC___
16. _RUQ_759
GG___GGTT_________AAAG_________CC___
17. _RUQ_759
CCAG______AGCCAG______GGGGAAGGGG
18. _RUQ_759
GG_________CT_______________CCTTCCGG
19. _RUQ_759
GGCT_________CC_________CC___TTCCGG
20. _6B_F456_T11
GGCT_________CC_________CC___TTCCGG
21. _EET_397_[ECU]_Fld#_117_Plt#_2
CCAG______AGCCAG______GGGGAAGGGG
 127 128 129 130 131 132 133 134       
1. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
2. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
3. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
4. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
5. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
6. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
7. _GC-08-274-8-46
CC______ACAGCCGGCCX_XX_XX_XX_XX_XX_X
8. _8846_1
CC_____________________X_XX_XX_XX_XX_XX_X
9. _8846_2
CC_____________________X_XX_XX_XX_XX_XX_X
10. _8846_4
CC_____________________X_XX_XX_XX_XX_XX_X
11. _8846_5
CC_____________________X_XX_XX_XX_XX_XX_X
12. _8846_6
CC_____________________X_XX_XX_XX_XX_XX_X
13. _8846_7
CC_____________________X_XX_XX_XX_XX_XX_X
14. _8846_9
CC_____________________X_XX_XX_XX_XX_XX_X
15. _RUQ_759
___CTAA_______________X_XX_XX_XX_XX_XX_X
16. _RUQ_759
___CTAA_______________X_XX_XX_XX_XX_XX_X
17. _RUQ_759
GG______AC___CCGGCCX_XX_XX_XX_XX_XX_X
18. _RUQ_759
________________________X_XX_XX_XX_XX_XX_X
19. _RUQ_759
CC_____________________X_XX_XX_XX_XX_XX_X
20. _6B_F456_T11
CC_____________________X_XX_XX_XX_XX_XX_X
21. _EET_397_[ECU]_Fld#_117_Plt#_2
GG______AC___CCGGCCX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 1
Notes: 1
 Mars, 2018
2._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 2
Notes: 2
 Mars, 2018
3._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 4
Notes: 4
 Mars, 2018
4._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 5
Notes: 5
 Mars, 2018
5._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 6
Notes: 6
 Mars, 2018
6._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 7
Notes: 7
 Mars, 2018
7._EET_397_[ECU] GC-08-274-8-46
Location: Tree: 9
Notes: 9
 Mars, 2018
8._EET_397_[ECU]
Location: 8846 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
9._EET_397_[ECU]
Location: 8846 2
 Dapeng Zhang, 2016
10._EET_397_[ECU]
Location: 8846 4
 Dapeng Zhang, 2016
11._EET_397_[ECU]
Location: 8846 5
 Dapeng Zhang, 2016
12._EET_397_[ECU]
Location: 8846 6
 Dapeng Zhang, 2016
13._EET_397_[ECU]
Location: 8846 7
 Dapeng Zhang, 2016
14._EET_397_[ECU]
Location: 8846 9
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

15._EET_397_[ECU] RUQ 759
 Lambert Motilal, 2023
16._EET_397_[ECU] RUQ 759
 Lambert Motilal, 2023
17._EET_397_[ECU] RUQ 759
Notes: Reading_Collection
 Mars, 2018
18._EET_397_[ECU] RUQ 759
 Dapeng Zhang, 2014
19._EET_397_[ECU] RUQ 759
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

20._EET_397_[ECU]
Location: 6B F456 T11
 Dapeng Zhang, 2016

USDA-TARS United States of America

21._EET_397_[ECU] EET 397 [ECU]_Fld#_117_Plt#_2
Location: Field: 117, Tree: 2
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129TcSNP1527 130Tcm001s00947643
131Tcm002s20575712 132Tcm003s01336581 133Tcm003s07402719 134Tcm006s26664133