SNP Profiles of ICS 41 View Data

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
1._ICS 41___	CT	AC	___	___	___	CT	___	CC	TT	___	___	___	___	TT
2._ICS 41___	___	___	CG	AC	AA	___	AG	___	___	GG	AA	CC	AA	___
3._ICS 41___	___	___	___	___	___	___	___	___	___	___	TT	CC	___	___
4._ICS 41___	___	___	GG	CC	AT	___	AG	___	___	AG	GG	AC	AG	___

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
1._ICS 41___	AT	AC	___	___	___	___	CT	AG	___	GT	___	AA	___	___
2._ICS 41___	___	AC	CC	AG	AT	GG	___	___	AC	___	GG	AA	GG	GG
3._ICS 41___	___	CC	GG	CT	___	GG	___	___	AC	___	CC	AA	___	CC
4._ICS 41___	___	AC	CC	AG	AT	AA	___	___	CC	___	CG	AG	GG	AG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
1._ICS 41___	TT	AA	___	AG	AA	___	___	___	___	CC	___	___	___	___
2._ICS 41___	___	___	TT	AG	___	GG	AA	AG	AG	___	AG	AT	CG	___
3._ICS 41___	___	___	___	AG	___	GG	AA	___	___	___	___	___	CC	AG
4._ICS 41___	___	___	AT	AG	___	AG	AT	AG	AA	___	GG	AT	CG	___

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
1._ICS 41___	___	AA	___	CC	AC	___	GG	___	___	___	GG	AA	CC	CC
2._ICS 41___	GG	___	AC	___	AC	___	___	AA	AC	AG	GG	___	CC	GG
3._ICS 41___	___	___	___	___	AC	CC	___	___	GT	___	GG	___	CC	CC
4._ICS 41___	AG	___	CC	___	CC	___	___	GG	AC	AA	CC	___	CC	GG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
1._ICS 41___	___	CT	GG	CC	AG	___	CG	___	CT	GG	AG	CT	___	___
2._ICS 41___	AA	___	___	___	___	AA	___	AA	___	CC	AG	___	AA	CC
3._ICS 41___	TT	___	___	___	___	___	___	___	CT	GG	AG	___	___	___
4._ICS 41___	AG	___	___	___	___	AA	___	AG	___	AA	AG	___	AC	AC

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
1._ICS 41___	___	TT	AC	AT	CT	___	CG	___	___	___	GG	___	___	___
2._ICS 41___	AA	___	AC	___	GG	AG	CG	___	AG	CG	GG	AG	CC	GG
3._ICS 41___	TT	___	AC	___	___	___	CG	CC	TT	___	___	___	___	___
4._ICS 41___	AC	___	CC	___	CC	AG	CG	___	GG	GG	AG	AA	GG	AA

	85	86	87	88	89	90	91	92	93	94	95	96	97	98
1._ICS 41___	CG	___	___	AG	CC	TT	AA	___	CC	___	GG	___	___	___
2._ICS 41___	___	AT	GG	AG	___	___	___	AA	___	AG	GG	CC	AT	AG
3._ICS 41___	___	___	___	AG	CC	___	___	___	___	CT	___	GG	___	___
4._ICS 41___	___	AA	AG	AG	___	___	___	AG	___	AG	AA	AA	AA	GG

	99	100	101	102	103	104	105	106	107	108	109	110	111	112
1._ICS 41___	___	CC	___	CC	___	___	___	GG	AA	GT	___	GG	TT	___
2._ICS 41___	GG	___	___	___	AG	AG	AA	___	___	AC	AG	___	___	AG
3._ICS 41___	GG	___	TT	___	___	___	___	___	___	GT	___	___	___	CT
4._ICS 41___	GG	___	___	___	AA	AA	AC	___	___	AA	GG	___	___	AG

	113	114	115	116	117	118	119	120	121	122	123	124	125	126
1._ICS 41___	___	___	AG	AG	___	___	___	CG	___	___	CC	AA	___	___
2._ICS 41___	CC	AG	___	___	AG	GG	GG	CG	GG	GG	___	___	CC	CC
3._ICS 41___	___	___	___	___	___	CC	CC	CG	GG	___	___	___	___	___
4._ICS 41___	AA	GG	___	___	AA	GG	AG	CC	AG	AG	___	___	AC	AC

	127	128
1._ICS 41___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._ICS 41___	GG	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._ICS 41___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._ICS 41___	GG	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._ICS_41 RUQ 1218

Lambert Motilal, 2023

Population Assignment:

Par
0.481 Sca
0.508

2._ICS_41 RUQ 1218

Notes: Reading_Collection

3._ICS_41 RUQ 1218

Dapeng Zhang, 2014

USDA-TARS United States of America

4._ICS_41 ICS 41_Fld#_15_Plt#_1

Location: Field: 15, Tree: 1

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP25	4	TcSNP28	5	TcSNP32
6	TcSNP33	7	TcSNP42	8	TcSNP49	9	TcSNP52	10	TcSNP60
11	TcSNP75	12	TcSNP90	13	TcSNP122	14	TcSNP131	15	TcSNP143
16	TcSNP144	17	TcSNP150	18	TcSNP151	19	TcSNP154	20	TcSNP174
21	TcSNP176	22	TcSNP189	23	TcSNP193	24	TcSNP194	25	TcSNP226
26	TcSNP230	27	TcSNP240	28	TcSNP242	29	TcSNP290	30	TcSNP305
31	TcSNP316	32	TcSNP329	33	TcSNP363	34	TcSNP364	35	TcSNP372
36	TcSNP413	37	TcSNP418	38	TcSNP421	39	TcSNP429	40	TcSNP430
41	TcSNP448	42	TcSNP469	43	TcSNP497	44	TcSNP519	45	TcSNP521
46	TcSNP522	47	TcSNP529	48	TcSNP534	49	TcSNP546	50	TcSNP547
51	TcSNP560	52	TcSNP561	53	TcSNP577	54	TcSNP589	55	TcSNP591
56	TcSNP602	57	TcSNP619	58	TcSNP640	59	TcSNP642	60	TcSNP644
61	TcSNP645	62	TcSNP653	63	TcSNP660	64	TcSNP689	65	TcSNP702
66	TcSNP723	67	TcSNP731	68	TcSNP739	69	TcSNP751	70	TcSNP776
71	TcSNP799	72	TcSNP800	73	TcSNP823	74	TcSNP835	75	TcSNP836
76	TcSNP860	77	TcSNP872	78	TcSNP878	79	TcSNP891	80	TcSNP894
81	TcSNP899	82	TcSNP917	83	TcSNP929	84	TcSNP944	85	TcSNP945
86	TcSNP953	87	TcSNP994	88	TcSNP998	89	TcSNP999	90	TcSNP1010
91	TcSNP1019	92	TcSNP1034	93	TcSNP1053	94	TcSNP1060	95	TcSNP1062
96	TcSNP1063	97	TcSNP1075	98	TcSNP1096	99	TcSNP1111	100	TcSNP1112
101	TcSNP1126	102	TcSNP1144	103	TcSNP1149	104	TcSNP1156	105	TcSNP1175
106	TcSNP1205	107	TcSNP1230	108	TcSNP1253	109	TcSNP1270	110	TcSNP1275
111	TcSNP1293	112	TcSNP1309	113	TcSNP1350	114	TcSNP1383	115	TcSNP1401
116	TcSNP1404	117	TcSNP1414	118	TcSNP1439	119	TcSNP1442	120	TcSNP1458
121	TcSNP1484	122	TcSNP1520	123	TcSNP1524	124	TcSNP1527	125	Tcm001s00947643
126	Tcm003s01336581	127	Tcm003s07402719	128	Tcm006s26664133