SNP Profiles of IFC 5 [CIV]   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._IFC 5 [CIV]___
__________________________________________
2._IFC 5 [CIV]___
TTCC_________CC___CCGG____________GG
3._IFC 5 [CIV]___
______GGCCTT___GG______GGAGACAG___
4._IFC 5 [CIV]___
______________________________CTAC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._IFC 5 [CIV]___
___AC___CC___GG______AC___GGAA______
2._IFC 5 [CIV]___
ATAC____________CTGG___TT___AA______
3._IFC 5 [CIV]___
___ACACGGATGG______AC___GGAAGGGG
4._IFC 5 [CIV]___
___ACGTCC___GG______AC___CCAA___CC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._IFC 5 [CIV]___
_______________AGAACT____________CG___
2._IFC 5 [CIV]___
TTAA___AGAC____________CC____________
3._IFC 5 [CIV]___
______TTAG___AGAAAGGG___GGTTCG___
4._IFC 5 [CIV]___
_________AG___AGAA_______________CGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._IFC 5 [CIV]___
______________________________CC___ACCT
2._IFC 5 [CIV]___
___CC___CTAC___AG_________CCATACCT
3._IFC 5 [CIV]___
AA___CC___CC______GGAAAACC___ACAG
4._IFC 5 [CIV]___
____________CCCT______TT___CC___AACT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._IFC 5 [CIV]___
AA____________________________________GT
2._IFC 5 [CIV]___
______CTAACGAA___GG___TTGTGGCT___
3._IFC 5 [CIV]___
___AA____________AG___AA___ACGG___AC
4._IFC 5 [CIV]___
___TT_____________________TTGTGG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._IFC 5 [CIV]___
__________________AGCCGGCC____________
2._IFC 5 [CIV]___
______TTAAAATT___GG_________AG______
3._IFC 5 [CIV]___
AAAA___AA___CCAGCC___GGGGAGAAGG
4._IFC 5 [CIV]___
___TT___AA_________GGCCCC____________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1._IFC 5 [CIV]___
_________TT_______________CC___CT______
2._IFC 5 [CIV]___
___CC______GGTTCTAA______CC___AA___
3._IFC 5 [CIV]___
GG___AAAAGG_________AA______AGAACC
4._IFC 5 [CIV]___
____________GGTT_______________CT___GG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1._IFC 5 [CIV]___
______GG___TT___________________________
2._IFC 5 [CIV]___
_________TT___TT_________GTAACTTT___
3._IFC 5 [CIV]___
AAGGGG_________AAAACC_________AAGG
4._IFC 5 [CIV]___
______GG___TT_____________________TT___
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1._IFC 5 [CIV]___
________________________CT___CC_________
2._IFC 5 [CIV]___
GTTT_________GGGG_________GG______CT
3._IFC 5 [CIV]___
______AAAAGG______AAAGGGCCAAAA___
4._IFC 5 [CIV]___
______TT_______________CTCCGGAA______
 127 128 129 130 131          
1._IFC 5 [CIV]___
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X
2._IFC 5 [CIV]___
AT____________X_XX_XX_XX_XX_XX_XX_XX_XX_X
3._IFC 5 [CIV]___
___CCACAGAAX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._IFC 5 [CIV]___
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

Center for Forestry Research and Technology Transfer Vietnam

1._IFC_5_[CIV]

 Jocelyn De Wever et al., 2019

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

2._IFC_5_[CIV] RUQ 848

 Lambert Motilal, 2023
Population Assignment: 

3._IFC_5_[CIV] RUQ 848

Notes: Reading_Collection
 Mars, 2018

4._IFC_5_[CIV] RUQ 848

 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1237
111TcSNP1253 112TcSNP1270 113TcSNP1275 114TcSNP1293 115TcSNP1309
116TcSNP1350 117TcSNP1383 118TcSNP1401 119TcSNP1404 120TcSNP1414
121TcSNP1439 122TcSNP1442 123TcSNP1458 124TcSNP1484 125TcSNP1520
126TcSNP1524 127TcSNP1527 128Tcm001s00947643 129Tcm003s01336581 130Tcm003s07402719
131Tcm006s26664133