SNP Profiles of IMC 20 View Data

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
1._IMC 20___	CT	___	___	___	TT	___	CC	GG	___	___	___	___	TT	AA
2._IMC 20___	___	GG	CC	TT	___	GG	___	___	GG	AA	CC	AA	___	___
3._IMC 20___	___	___	___	___	___	___	___	___	___	TT	CC	___	___	___
4._IMC 20___	___	GG	CC	TT	___	GG	___	___	GG	AA	CC	AA	___	___

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
1._IMC 20___	AC	___	___	___	___	CT	GG	___	GG	___	AG	___	___	TT
2._IMC 20___	AC	AC	AG	AT	GG	___	___	AC	___	CG	AG	GG	AG	___
3._IMC 20___	AC	GT	CT	___	___	___	___	AC	___	CG	AG	___	CT	___
4._IMC 20___	AC	AC	AG	AT	GG	___	___	AC	___	CG	AG	GG	AG	___

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
1._IMC 20___	AA	___	GG	AA	___	___	___	___	CC	___	___	___	___	___
2._IMC 20___	___	TT	GG	___	GG	AA	AG	AG	___	GG	AT	GG	___	AG
3._IMC 20___	___	___	GG	___	GG	AA	___	___	___	___	___	CC	AA	___
4._IMC 20___	___	TT	GG	___	GG	AA	AG	AG	___	GG	AT	GG	___	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
1._IMC 20___	AA	___	CC	AC	___	AA	___	___	___	GG	AT	AC	CT	___
2._IMC 20___	___	AA	___	AC	___	___	AG	CC	GG	CG	___	AC	AG	GG
3._IMC 20___	___	___	___	AC	CC	___	___	GG	___	CG	___	AC	CT	CC
4._IMC 20___	___	AA	___	AC	___	___	AG	CC	GG	CG	___	AC	AG	GG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
1._IMC 20___	TT	AG	CC	AA	___	CG	___	TT	GG	GG	CC	___	___	___
2._IMC 20___	___	___	___	___	AA	___	AA	___	CC	GG	___	AA	AC	AA
3._IMC 20___	___	___	___	___	___	___	___	TT	GG	GG	___	___	___	TT
4._IMC 20___	___	___	___	___	AA	___	AA	___	CC	GG	___	AA	AC	AA

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
1._IMC 20___	TT	CC	AA	TT	___	CC	___	___	___	GG	___	___	___	CG
2._IMC 20___	___	CC	___	CG	GG	GG	___	GG	GG	GG	GG	GG	GG	___
3._IMC 20___	___	CC	___	___	___	CC	CC	CC	___	___	___	___	___	___
4._IMC 20___	___	CC	___	CG	GG	GG	___	GG	GG	GG	GG	GG	GG	___

	85	86	87	88	89	90	91	92	93	94	95	96	97	98
1._IMC 20___	___	___	AA	CC	CC	AA	___	CC	___	GG	___	___	___	___
2._IMC 20___	AT	AA	AA	___	___	___	AA	___	AG	GG	CC	AA	GG	GG
3._IMC 20___	___	___	AA	CC	___	___	___	___	CT	___	GG	___	___	GG
4._IMC 20___	AT	AA	AA	___	___	___	AA	___	AG	GG	CC	AA	GG	GG

	99	100	101	102	103	104	105	106	107	108	109	110	111	112
1._IMC 20___	CT	___	CC	___	___	___	GT	AA	GT	___	GT	AT	___	___
2._IMC 20___	___	___	___	AA	GG	CC	___	___	AA	AA	___	___	AG	CC
3._IMC 20___	___	TT	___	___	___	___	___	___	GT	___	___	___	CT	___
4._IMC 20___	___	___	___	AA	GG	CC	___	___	AA	AA	___	___	AG	CC

	113	114	115	116	117	118	119	120	121	122	123	124	125	126
1._IMC 20___	___	AG	GG	___	___	___	GG	___	___	TT	AT	___	___	___
2._IMC 20___	GG	___	___	AG	GG	AA	CC	AG	GG	___	___	AC	AA	AA
3._IMC 20___	___	___	___	___	CC	TT	GG	AG	___	___	___	___	___	___
4._IMC 20___	GG	___	___	AG	GG	AA	CC	AG	GG	___	___	AC	AA	AA

	127
1._IMC 20___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._IMC 20___	AC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._IMC 20___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._IMC 20___	AC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._IMC_20 RUQ 985

Lambert Motilal, 2023

Population Assignment:

2._IMC_20 RUQ 985

Notes: Reading_Collection

3._IMC_20 RUQ 985

Dapeng Zhang, 2014

USDA-SHRS United States of America

4._IMC_20 MITC-000417

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP25	3	TcSNP28	4	TcSNP32	5	TcSNP33
6	TcSNP42	7	TcSNP49	8	TcSNP52	9	TcSNP60	10	TcSNP75
11	TcSNP90	12	TcSNP122	13	TcSNP131	14	TcSNP143	15	TcSNP144
16	TcSNP150	17	TcSNP151	18	TcSNP154	19	TcSNP174	20	TcSNP176
21	TcSNP189	22	TcSNP193	23	TcSNP194	24	TcSNP226	25	TcSNP230
26	TcSNP240	27	TcSNP242	28	TcSNP290	29	TcSNP305	30	TcSNP316
31	TcSNP329	32	TcSNP363	33	TcSNP364	34	TcSNP372	35	TcSNP413
36	TcSNP418	37	TcSNP421	38	TcSNP429	39	TcSNP430	40	TcSNP448
41	TcSNP469	42	TcSNP497	43	TcSNP519	44	TcSNP521	45	TcSNP522
46	TcSNP529	47	TcSNP534	48	TcSNP546	49	TcSNP547	50	TcSNP560
51	TcSNP561	52	TcSNP577	53	TcSNP589	54	TcSNP591	55	TcSNP602
56	TcSNP619	57	TcSNP640	58	TcSNP642	59	TcSNP644	60	TcSNP645
61	TcSNP653	62	TcSNP660	63	TcSNP689	64	TcSNP702	65	TcSNP723
66	TcSNP731	67	TcSNP739	68	TcSNP751	69	TcSNP776	70	TcSNP799
71	TcSNP800	72	TcSNP823	73	TcSNP835	74	TcSNP836	75	TcSNP860
76	TcSNP872	77	TcSNP878	78	TcSNP891	79	TcSNP894	80	TcSNP899
81	TcSNP917	82	TcSNP929	83	TcSNP944	84	TcSNP945	85	TcSNP953
86	TcSNP994	87	TcSNP998	88	TcSNP999	89	TcSNP1010	90	TcSNP1019
91	TcSNP1034	92	TcSNP1053	93	TcSNP1060	94	TcSNP1062	95	TcSNP1063
96	TcSNP1075	97	TcSNP1096	98	TcSNP1111	99	TcSNP1112	100	TcSNP1126
101	TcSNP1144	102	TcSNP1149	103	TcSNP1156	104	TcSNP1175	105	TcSNP1205
106	TcSNP1230	107	TcSNP1253	108	TcSNP1270	109	TcSNP1275	110	TcSNP1293
111	TcSNP1309	112	TcSNP1350	113	TcSNP1383	114	TcSNP1401	115	TcSNP1404
116	TcSNP1414	117	TcSNP1439	118	TcSNP1442	119	TcSNP1458	120	TcSNP1484
121	TcSNP1520	122	TcSNP1524	123	TcSNP1527	124	Tcm001s00947643	125	Tcm003s01336581
126	Tcm003s07402719	127	Tcm006s26664133