SNP Profiles of N 38 [T38]   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_1159
TTCC_________CC___CCTT____________GG
2. _RUQ_1159
______GGCCTT___GG______GGAGACAA___
3. _RUQ_1159
______________________________CTAC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_1159
TTAC____________CCGG___TT___AA______
2. _RUQ_1159
___ACAAGGTTGG______AA___GGAAGGGG
3. _RUQ_1159
___ACTTCC___GG______AA___CCAA___CC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_1159
TTAA___GGAA____________CT____________
2. _RUQ_1159
______TTGG___GGAAAAGG___GGATGG___
3. _RUQ_1159
_________GG___GG__________________CCAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_1159
___CC___TT___AG_________CCTTACTT___
2. _RUQ_1159
AA___CC___CC___GGAAAACC___ACAAAA
3. _RUQ_1159
____________CC______TT___CC___AATTTT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_1159
TTAACCAA___CG___TTGGGGTT_________
2. _RUQ_1159
____________GG___AA___CCGG___AAAAAA
3. _RUQ_1159
_____________________TTGGGG_________TT
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_1159
TTAAAATT___GG_________AA_________CC
2. _RUQ_1159
___AA___CCAGCC___GGGGAAAAGGAG___
3. _RUQ_1159
___AA_________GGCCCC__________________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_1159
______GGTTCTAA______AA____________TT
2. _RUQ_1159
AAAAGG_________AAGGAAACAAGGGG___
3. _RUQ_1159
______GGTT_________CC___GT______GG___
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_1159
___TT_________TTAATT___GG_________GG
2. _RUQ_1159
______AAAACC______AAGG___AAAAGG___
3. _RUQ_1159
AT__________________TT______TT_________
 113 114 115 116 117 118 119 120 121 122 123 124 125  
1. _RUQ_1159
GG_________GG______CCTT____________X_X
2. _RUQ_1159
___AAAAGGCCAAAA______CCCCAAAAX_X
3. _RUQ_1159
______TTCCGGAA_____________________X_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._N_38_[T38] RUQ 1159
 Lambert Motilal, 2023
Population Assignment: 
2._N_38_[T38] RUQ 1159
Notes: Reading_Collection
 Mars, 2018
3._N_38_[T38] RUQ 1159
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP546 49TcSNP547 50TcSNP560
51TcSNP561 52TcSNP577 53TcSNP589 54TcSNP591 55TcSNP602
56TcSNP619 57TcSNP640 58TcSNP642 59TcSNP644 60TcSNP645
61TcSNP653 62TcSNP660 63TcSNP689 64TcSNP702 65TcSNP723
66TcSNP731 67TcSNP739 68TcSNP751 69TcSNP776 70TcSNP799
71TcSNP800 72TcSNP823 73TcSNP835 74TcSNP836 75TcSNP860
76TcSNP872 77TcSNP878 78TcSNP891 79TcSNP894 80TcSNP899
81TcSNP917 82TcSNP929 83TcSNP944 84TcSNP945 85TcSNP953
86TcSNP994 87TcSNP998 88TcSNP999 89TcSNP1010 90TcSNP1019
91TcSNP1034 92TcSNP1060 93TcSNP1062 94TcSNP1063 95TcSNP1075
96TcSNP1096 97TcSNP1111 98TcSNP1112 99TcSNP1126 100TcSNP1144
101TcSNP1149 102TcSNP1156 103TcSNP1175 104TcSNP1205 105TcSNP1230
106TcSNP1253 107TcSNP1270 108TcSNP1275 109TcSNP1309 110TcSNP1350
111TcSNP1383 112TcSNP1401 113TcSNP1404 114TcSNP1414 115TcSNP1439
116TcSNP1442 117TcSNP1458 118TcSNP1484 119TcSNP1520 120TcSNP1524
121TcSNP1527 122Tcm001s00947643 123Tcm003s01336581 124Tcm003s07402719 125Tcm006s26664133