SNP Profiles of "SCA 9"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _SCA9
__________________________________________
2. _RUQ_1064
__________________________________________
3. _RUQ_1064
CTCC_________TT___CCGG____________GG
4. _RUQ_1064
______GGCCAT___GG______GGAACCAA___
5. _RUQ_1064
______________________________TTCC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _SCA9
___CC___CT__________________GGAG______
2. _RUQ_1064
___AC___CC___GG______AA___CGAG______
3. _RUQ_1064
ATAC____________TTAG___GG___AG______
4. _RUQ_1064
___ACCCGGATGG______AA___CGAGGGAG
5. _RUQ_1064
___ACGGCC___GG______AA___CGAG___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _SCA9
_______________AGAACC____________CC___
2. _RUQ_1064
_______________GGATCT____________CC___
3. _RUQ_1064
CTAA___GGAA____________CC____________
4. _RUQ_1064
______TTGG___GGATAGGG___GGAAGG___
5. _RUQ_1064
_________GG___GGAT_______________CCAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _SCA9
______________________________CG___CCCT
2. _RUQ_1064
______________________________GG___AACC
3. _RUQ_1064
___AC___CCCC___AA_________GGATAACC
4. _RUQ_1064
AA___AA___CC______AACCGGGG___AAGG
5. _RUQ_1064
____________CCCC______GG___GG___AACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _SCA9
GG____________________________________TT
2. _RUQ_1064
AA____________________________________TT
3. _RUQ_1064
______TTAGCCAA___CC___TTGGGGCT___
4. _RUQ_1064
___AG____________AA___AA___CCGG___AA
5. _RUQ_1064
___CT_____________________TTGGGG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _SCA9
__________________AAGGCGCT____________
2. _RUQ_1064
__________________GGGGGGCT____________
3. _RUQ_1064
______TTACTTTT___CC_________GG______
4. _RUQ_1064
ACAA___AC___CCGGGG___AGGGGGAGGG
5. _RUQ_1064
___TT___AC_________CCCCTT____________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _SCA9
_________CT_______________CC___CT______
2. _RUQ_1064
_________CT_______________CG___CC______
3. _RUQ_1064
___CC______AGCCCCAA______CC___AG___
4. _RUQ_1064
GG___AAAGAG_________AA______GGAGCC
5. _RUQ_1064
____________AGCC_______________CC___GG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _SCA9
______AG___AT___________________________
2. _RUQ_1064
______GG___TT___________________________
3. _RUQ_1064
_________TT___CC_________GGAATT___GG
4. _RUQ_1064
AAGGGG_________AAAAAC______AAAA___
5. _RUQ_1064
______GG___TT__________________TT______
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _SCA9
__________________CT___GG_______________
2. _RUQ_1064
__________________CC___GG_______________
3. _RUQ_1064
AT______AGGG_________CC______TTAA___
4. _RUQ_1064
___AGGG______AAGGAAGGAAGG______CC
5. _RUQ_1064
___CT____________CCTTCCAA____________
 127 128 129            
1. _SCA9
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_1064
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_1064
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_1064
ACAAAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5. _RUQ_1064
_________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

Center for Forestry Research and Technology Transfer Vietnam

1._SCA_9
 Jocelyn De Wever et al., 2019

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

2._SCA_9 RUQ 1064
 Jocelyn De Wever et al., 2019
3._SCA_9 RUQ 1064
 Lambert Motilal, 2023
4._SCA_9 RUQ 1064
Notes: Reading_Collection
 Mars, 2018
5._SCA_9 RUQ 1064
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1253
111TcSNP1270 112TcSNP1275 113TcSNP1293 114TcSNP1309 115TcSNP1383
116TcSNP1401 117TcSNP1404 118TcSNP1414 119TcSNP1439 120TcSNP1442
121TcSNP1458 122TcSNP1484 123TcSNP1520 124TcSNP1524 125TcSNP1527
126Tcm001s00947643 127Tcm003s01336581 128Tcm003s07402719 129Tcm006s26664133