SNP Profiles of SGU 54   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
2._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
3._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
4._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
5._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
6._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
7._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
8._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
9._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
10._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
11._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
12._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
13._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
14._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
15._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
16._SGU 54___
GGGGTTGGCCTTACCTACGTCTATAGAA
17._SGU 54___
GG___TT_______________ACGTCT______AA
18._SGU 54___
GG___TT_______________ACGTCT______AA
19._SGU 54___
GG___TT_______________ACGTCT______AA
20._SGU 54___
GG___TT_______________ACGTCT______AA
21._SGU 54___
GG___TT_______________ACGTCT______AA
22._SGU 54___
GG___TT_______________ACGTCT______AA
23._SGU 54___
GG___TT_______________ACGTCT______AA
24._SGU 54___
GG___TT_______________ACGTCT______AA
25._SGU 54___
GG___TT_______________ACGTCT______AA
26._SGU 54___
GG___TT_______________ACGTCT______AA
27._SGU 54___
GG___TT_______________ACGTCT______AA
28._SGU 54___
GG___TT_______________ACGTCT______AA
29._SGU 54___
GG___TT_______________ACGTCT______AA
30._SGU 54___
GG___TT_______________ACGTCT______AA
31._SGU 54___
GG___TT_______________ACGTCT______AA
32._SGU 54___
GG___TT_______________ACGTCT______AA
33._SGU 54___
GG___TT_______________CCGTCT______AC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
2._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
3._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
4._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
5._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
6._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
7._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
8._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
9._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
10._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
11._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
12._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
13._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
14._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
15._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
16._SGU 54___
CCAGGGTTAAAGAGAATTAGGGATCCAG
17._SGU 54___
CCAG___TT_________AA______GG______AG
18._SGU 54___
CCAG___TT_________AA______GG______AG
19._SGU 54___
CCAG___TT_________AA______GG______AG
20._SGU 54___
CCAG___TT_________AA______GG______AG
21._SGU 54___
CCAG___TT_________AA______GG______AG
22._SGU 54___
CCAG___TT_________AA______GG______AG
23._SGU 54___
CCAG___TT_________AA______GG______AG
24._SGU 54___
CCAG___TT_________AA______GG______AG
25._SGU 54___
CCAG___TT_________AA______GG______AG
26._SGU 54___
CCAG___TT_________AA______GG______AG
27._SGU 54___
CCAG___TT_________AA______GG______AG
28._SGU 54___
CCAG___TT_________AA______GG______AG
29._SGU 54___
CCAG___TT_________AA______GG______AG
30._SGU 54___
CCAG___TT_________AA______GG______AG
31._SGU 54___
CCAG___TT_________AA______GG______AG
32._SGU 54___
CCAG___TT_________AA______GG______AG
33._SGU 54___
CGAG___CT_________AA______GG______AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
2._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
3._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
4._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
5._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
6._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
7._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
8._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
9._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
10._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
11._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
12._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
13._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
14._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
15._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
16._SGU 54___
ACCCCTAGGTAGCCACCCGGCTAGAAAG
17._SGU 54___
___CCCT___GT___CCAC______CTAG______
18._SGU 54___
___CCCT___GT___CCAC______CTAG______
19._SGU 54___
___CCCT___GT___CCAC______CTAG______
20._SGU 54___
___CCCT___GT___CCAC______CTAG______
21._SGU 54___
___CCCT___GT___CCAC______CTAG______
22._SGU 54___
___CCCT___GT___CCAC______CTAG______
23._SGU 54___
___CCCT___GT___CCAC______CTAG______
24._SGU 54___
___CCCT___GT___CCAC______CTAG______
25._SGU 54___
___CCCT___GT___CCAC______CTAG______
26._SGU 54___
___CCCT___GT___CCAC______CTAG______
27._SGU 54___
___CCCT___GT___CCAC______CTAG______
28._SGU 54___
___CCCT___GT___CCAC______CTAG______
29._SGU 54___
___CCCT___GT___CCAC______CTAG______
30._SGU 54___
___CCCT___GT___CCAC______CTAG______
31._SGU 54___
___CCCT___GT___CCAC______CTAG______
32._SGU 54___
___CCCT___GT___CCAC______CTAG______
33._SGU 54___
___CCCT___TT___CCAC______TTAG______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
2._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
3._SGU 54___
TTCCGGGGTT___TTCCGGAACGCGCTCC
4._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
5._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
6._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
7._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
8._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
9._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
10._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
11._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
12._SGU 54___
TTCCGGGGTTTTTTCCGGAACG___CTCC
13._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
14._SGU 54___
TTCCGGGGTTTTTTCC___AACGCGCTCC
15._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
16._SGU 54___
TTCCGGGGTTTTTTCCGGAACGCGCTCC
17._SGU 54___
______GG_____________________CG___CT___
18._SGU 54___
______GG_____________________CG___CT___
19._SGU 54___
______GG_____________________CG___CT___
20._SGU 54___
______GG_____________________CG___CT___
21._SGU 54___
______GG_____________________CG___CT___
22._SGU 54___
______GG_____________________CG___CT___
23._SGU 54___
______GG_____________________CG___CT___
24._SGU 54___
______GG_____________________CG___CT___
25._SGU 54___
______GG_____________________CG___CT___
26._SGU 54___
______GG_____________________CG___CT___
27._SGU 54___
______GG_____________________CG___CT___
28._SGU 54___
______GG_____________________CG___CT___
29._SGU 54___
______GG_____________________CG___CT___
30._SGU 54___
______GG_____________________CG___CT___
31._SGU 54___
______GG_____________________CG___CT___
32._SGU 54___
______GG_____________________CG___CT___
33._SGU 54___
______GT_____________________GG___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
2._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
3._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
4._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
5._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
6._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
7._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
8._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
9._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
10._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
11._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
12._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
13._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
14._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
15._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
16._SGU 54___
AGCTGGCTAATTAACTTTCCCTAGGTAA
17._SGU 54___
___CTGG___AATTAA_________CTAG___AA
18._SGU 54___
___CTGG___AATTAA_________CTAG___AA
19._SGU 54___
___CTGG___AATTAA_________CTAG___AA
20._SGU 54___
___CTGG___AATTAA_________CTAG___AA
21._SGU 54___
___CTGG___AATTAA_________CTAG___AA
22._SGU 54___
___CTGG___AATTAA_________CTAG___AA
23._SGU 54___
___CTGG___AATTAA_________CTAG___AA
24._SGU 54___
___CTGG___AATTAA_________CTAG___AA
25._SGU 54___
___CTGG___AATTAA_________CTAG___AA
26._SGU 54___
___CTGG___AATTAA_________CTAG___AA
27._SGU 54___
___CTGG___AATTAA_________CTAG___AA
28._SGU 54___
___CTGG___AATTAA_________CTAG___AA
29._SGU 54___
___CTGG___AATTAA_________CTAG___AA
30._SGU 54___
___CTGG___AATTAA_________CTAG___AA
31._SGU 54___
___CTGG___AATTAA_________CTAG___AA
32._SGU 54___
___CTGG___AATTAA_________CTAG___AA
33._SGU 54___
___TTGG___AATTAG_________CCAA___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
2._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
3._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
4._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
5._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
6._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
7._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
8._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
9._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
10._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
11._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
12._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
13._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
14._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
15._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
16._SGU 54___
CCAGATCTTTCTCCGGCCTTCTTTACGG
17._SGU 54___
_________CT______CC______TTCT___AC___
18._SGU 54___
_________CT______CC______TTCT___AC___
19._SGU 54___
_________CT______CC______TTCT___AC___
20._SGU 54___
_________CT______CC______TTCT___AC___
21._SGU 54___
_________CT______CC______TTCT___AC___
22._SGU 54___
_________CT______CC______TTCT___AC___
23._SGU 54___
_________CT______CC______TTCT___AC___
24._SGU 54___
_________CT______CC______TTCT___AC___
25._SGU 54___
_________CT______CC______TTCT___AC___
26._SGU 54___
_________CT______CC______TTCT___AC___
27._SGU 54___
_________CT______CC______TTCT___AC___
28._SGU 54___
_________CT______CC______TTCT___AC___
29._SGU 54___
_________CT______CC______TTCT___AC___
30._SGU 54___
_________CT______CC______TTCT___AC___
31._SGU 54___
_________CT______CC______TTCT___AC___
32._SGU 54___
_________CT______CC______TTCT___AC___
33._SGU 54___
_________TT______CT______GTCC___AA___
 85 86 87 88 89 90 91 92 93 94 95    
1._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
2._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
3._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
4._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
5._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
6._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
7._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
8._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
9._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
10._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
11._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
12._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
13._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
14._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
15._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
16._SGU 54___
TTCTCTGGAGCTACAGACAGAAX_XX_XX_X
17._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
18._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
19._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
20._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
21._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
22._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
23._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
24._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
25._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
26._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
27._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
28._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
29._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
30._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
31._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
32._SGU 54___
TT___CTGGAGCT_______________X_XX_XX_X
33._SGU 54___
TT___CTCGAACT_______________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._SGU_54 GC-01-013-1-13

Location: Tree: 1
Notes: 1
 Mars, 2018

2._SGU_54 GC-01-013-1-13

Location: Tree: 2
Notes: 2
 Mars, 2018

3._SGU_54 GC-01-013-1-13

Location: Tree: 3
Notes: 3
 Mars, 2018

4._SGU_54 GC-01-013-1-13

Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

5._SGU_54 GC-01-013-1-13

Location: Tree: 5
Notes: 5
 Mars, 2018

6._SGU_54 GC-01-013-1-13

Location: Tree: 6
Notes: 6
 Mars, 2018

7._SGU_54 GC-01-013-1-13

Location: Tree: 7
Notes: 7
 Mars, 2018

8._SGU_54 GC-01-013-1-13

Location: Tree: 8
Notes: 8
 Mars, 2018

9._SGU_54 GC-01-013-1-13

Location: Tree: 9
Notes: 9
 Mars, 2018

10._SGU_54 GC-01-013-1-13

Location: Tree: 10
Notes: 10
 Mars, 2018

11._SGU_54 GC-01-013-1-13

Location: Tree: 11
Notes: 11
 Mars, 2018

12._SGU_54 GC-01-013-1-13

Location: Tree: 12
Notes: 12
 Mars, 2018

13._SGU_54 GC-01-013-1-13

Location: Tree: 13
Notes: 13
 Mars, 2018

14._SGU_54 GC-01-013-1-13

Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

15._SGU_54 GC-01-013-1-13

Location: Tree: 16
Notes: 16 > FP4
 Mars, 2018

16._SGU_54 GC-01-013-1-13

Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

17._SGU_54

Location: 1110 1
 Dapeng Zhang, 2016

18._SGU_54

Location: 1110 2
 Dapeng Zhang, 2016

19._SGU_54

Location: 1110 3
 Dapeng Zhang, 2016

20._SGU_54

Location: 1110 5
 Dapeng Zhang, 2016

21._SGU_54

Location: 1110 6
 Dapeng Zhang, 2016

22._SGU_54

Location: 1110 7
 Dapeng Zhang, 2016

23._SGU_54

Location: 1110 8
 Dapeng Zhang, 2016

24._SGU_54

Location: 1110 9
 Dapeng Zhang, 2016

25._SGU_54

Location: 1110 10
 Dapeng Zhang, 2016

26._SGU_54

Location: 1110 11
 Dapeng Zhang, 2016

27._SGU_54

Location: 1110 12
 Dapeng Zhang, 2016

28._SGU_54

Location: 1110 13
 Dapeng Zhang, 2016

29._SGU_54

Location: 1110 14 > F
 Dapeng Zhang, 2016

30._SGU_54

Location: 1110 14 > F
 Dapeng Zhang, 2016

31._SGU_54

Location: 1110 16 > F
 Dapeng Zhang, 2016

32._SGU_54

Location: 1110 4 > FP
 Dapeng Zhang, 2016

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE) Costa Rica

33._SGU_54

Location: Cabiria
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133