SNP Profiles of GU 123 /V   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
GGCCTTGGCCCCCCCCGGCCGGGGAACC
1._GU_114_/P___
________CC__CCCC__GG________
2._GU_114_/P___
CC______CC__CCCC__GG________
3._GU_114_/P___
CCCCTTGGCC____CCCCGG______CC
4._GU_114_/P___
CC______CC__CCCC__GG________
5._GU_114_/P___
CC______CC__CCCC__GG________
6._GU_114_/P___
CC______CC__CCCC__GG________
7._GU_114_/P___
CC______CC__CCCC__GG________
8._GU_114_/P___
CC______CC__CCCC__GG________
9._GU_114_/P___
CC______CC__CCCC__GG________
10._GU_114_/P___
CC______CC__CCCC__GG________
11._GU_114_/P___
CC________________GG______CC
12._GU_114_/P___
GGGG__GGGG__GGGG__CCGGCC__GG
 15 16 17 18 19 20 21 22 23 24 25 26   
_Input profile
CCCCCCTTAAGGGGGGAAGGTTAAX_XX_X
1._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
2._GU_114_/P___
CCCC____AA__GG__AA__TTAAX_XX_X
3._GU_114_/P___
CCCCCC__AAGGGGCCAAGGTTAAX_XX_X
4._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
5._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
6._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
7._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
8._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
9._GU_114_/P___
CCCC____AA__GGCCAA__TTAAX_XX_X
10._GU_114_/P___
CCCC____AA__GGCCAA____AAX_XX_X
11._GU_114_/P___
CCCC________GG________AAX_XX_X
12._GU_114_/P___
CCCCGGAAAAGGGGGGAAGGAAAAX_XX_X

Input profile: GU_114_/P RUQ_813

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

1._GU_114_/P

83.3 %
12 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 12
 Dapeng Zhang, 2016

2._GU_114_/P

83.3 %
12 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X3 Y18
 Dapeng Zhang, 2016

3._GU_114_/P RUQ_813

80 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

4._GU_114_/P

76.9 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 1
 Dapeng Zhang, 2016

5._GU_114_/P

76.9 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 9
 Dapeng Zhang, 2016

6._GU_114_/P

76.9 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 7
 Dapeng Zhang, 2016

7._GU_114_/P

76.9 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 5
 Dapeng Zhang, 2016

8._GU_114_/P

76.9 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 3
 Dapeng Zhang, 2016

9._GU_114_/P RUQ_813

76.9 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

10._GU_114_/P

75 %
12 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8413 2
 Dapeng Zhang, 2016

11._GU_114_/P RUQ_813

71.4 %
7 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

12._GU_114_/P RUQ_813

59.1 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144