SNP Profiles of GU 123 /V   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CGCCTTGGCCCCCCCCGGCCGGGGAACC
1._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
2._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
3._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
4._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
5._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
6._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
7._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
8._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
9._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
10._GU_133_/C___
CGCCTTGGCCCCCCCCCCGG__GGAACC
11._GU_133_/C___
CG________________GG______CC
12._GU_133_/C___
CGCCTTGGCC____CCCCGG______CC
13._GU_133_/C___
CG______CC__CCCC__GG________
14._GU_133_/C___
CG______CC__CCCC__GG________
15._GU_133_/C___
CG______CC__CCCC__GG________
16._GU_133_/C___
CG______CC__CCCC__GG________
17._GU_133_/C___
CG______CC__CCCC__GG________
18._GU_133_/C___
CG______CC__CCCC__GG________
19._GU_133_/C___
CG______CC__CCCC__GG________
20._GU_133_/C___
CG______CC__CCCC__GG________
21._GU_133_/C___
CG______CC__CCCC__GG________
22._GU_133_/C___
CG______CC__CCCC__GG________
23._GU_133_/C___
CG______CC__CCCC__GG________
24._GU_133_/C___
CG______CC__CC____GG________
25._GU_133_/C___
CGCCTTGGCCCCCC__CCGGAA__AACC
26._GU_133_/C___
CGGG__GGGG__GGGG__CCGGCC__GG
27._GU_133_/C___
CGGG__GGGG__GGGG__CCGGCC__GG
 15 16 17 18 19 20 21 22 23 24 25 26   
_Input profile
ACCCCCTTAAGGGGGGAAGGTTAAX_XX_X
1._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
2._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
3._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
4._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
5._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
6._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
7._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
8._GU_133_/C___
ACCCCCTTAAGGGGCCAAGGTTAAX_XX_X
9._GU_133_/C___
ACCCCCTTAAGGGGCC__GGTTAAX_XX_X
10._GU_133_/C___
ACCCCCTTAAGG__CCAAGGTTAAX_XX_X
11._GU_133_/C___
ACCC________GG________AAX_XX_X
12._GU_133_/C___
ACCCCC__AAGGGGCCAAGGTTAAX_XX_X
13._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
14._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
15._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
16._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
17._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
18._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
19._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
20._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
21._GU_133_/C___
ACCC____AA__GGCCAA__TTAAX_XX_X
22._GU_133_/C___
ACCC____AA____CCAA__TTAAX_XX_X
23._GU_133_/C___
ACCC____AA__GGCC____TTAAX_XX_X
24._GU_133_/C___
ACCC____AA____CCAA__TTAAX_XX_X
25._GU_133_/C___
ACCCCC__AAGG__CCAAGGTTAAX_XX_X
26._GU_133_/C___
ACCCGGAAAAGGGGGGAAGGAAAAX_XX_X
27._GU_133_/C___
ACCCGGAAAAGGGGGGAAGGAAAAX_XX_X

Input profile: GU_133_/C RUQ_190

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

1._GU_133_/C GC-08-164-4-07

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._GU_133_/C GC-08-164-4-07

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._GU_133_/C GC-01-116-6-13

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP2
 Mars, 2018

4._GU_133_/C GC-01-116-6-13

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

5._GU_133_/C GC-01-116-6-13

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._GU_133_/C GC-08-164-4-07

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

7._GU_133_/C GC-08-164-4-07

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

8._GU_133_/C GC-08-164-4-07

88 %
25 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

9._GU_133_/C GC-08-164-4-07

87.5 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._GU_133_/C GC-01-116-6-13

87.5 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

11._GU_133_/C RUQ_190

85.7 %
7 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.998

12._GU_133_/C RUQ_190

85 %
20 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

13._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1613 2
 Dapeng Zhang, 2016

14._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1613 3 > FP
 Dapeng Zhang, 2016

15._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1613 9 > FP
 Dapeng Zhang, 2016

16._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 1
 Dapeng Zhang, 2016

17._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 2
 Dapeng Zhang, 2016

18._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 8
 Dapeng Zhang, 2016

19._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 10
 Dapeng Zhang, 2016

20._GU_133_/C

84.6 %
13 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 11
 Dapeng Zhang, 2016

21._GU_133_/C RUQ_190

84.6 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

22._GU_133_/C

83.3 %
12 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1613 1 > FP
 Dapeng Zhang, 2016

23._GU_133_/C

83.3 %
12 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8407 3
 Dapeng Zhang, 2016

24._GU_133_/C

81.8 %
11 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1613 10 > F
 Dapeng Zhang, 2016

25._GU_133_/C GC-01-116-6-13

81.8 %
22 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP3
 Mars, 2018

26._GU_133_/C GC-01-116-6-13

59.1 %
22 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._GU_133_/C MITC-000670

59.1 %
22 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144