SNP Profiles of APA 4   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCTTTTAACCGGCCCCGGCCGGTTAACC
1._APA_4___
GGTTTTAACC____CCCCGG______CC
2._APA_4___
GG________________GG______CC
3._APA_4___
CCAA__AAGG__GGGG__CCGGAA__GG
4._APA_4___
CCAA__AAGG__GGGG__CCGGAA__GG
 15 16 17 18 19 20 21 22 23 24 25 26   
_Input profile
AACCCCTTAAGGAAGGAAGGCCCCX_XX_X
1._APA_4___
AACCCC__AAGGAACCAAGGCCCCX_XX_X
2._APA_4___
AACC________AA________CCX_XX_X
3._APA_4___
AACCGGAAAAGGAAGGAAGGGGCCX_XX_X
4._APA_4___
AACCGGAAAAGGAAGGAAGGGGCCX_XX_X

Input profile: APA_4 APA4

 
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Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

1._APA_4 RUQ_843

80 %
20 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._APA_4 RUQ_843

71.4 %
7 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.631 Nan
0.142 Par
0.196

3._APA_4 RUQ_843

59.1 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._APA_4 APA_4_Fld#_26_Plt#_1

59.1 %
22 shared markers

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USDA-TARS, United States of America
Location: Field: 26, Tree: 1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1458 2TcSNP1439 3TcSNP1126 4TcSNP1111 5TcSNP1060
6TcSNP1041 7TcSNP994 8TcSNP891 9TcSNP878 10TcSNP872
11TcSNP860 12TcSNP751 13TcSNP606 14TcSNP602 15TcSNP591
16TcSNP577 17TcSNP448 18TcSNP413 19TcSNP372 20TcSNP364
21TcSNP230 22TcSNP226 23TcSNP193 24TcSNP174 25TcSNP151
26TcSNP144