SNP Profiles of IMC 55   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATTTCGGGAAATGGTTAAGGCCGGCCAA
1._RUQ_836B
ATTTCGGGAAATGGTTAAGGCCGGCCAA
2._RUQ_836
____CG________AA______GG____
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCCCAACGGGCCTTATAATTTTGGGGTT
1._RUQ_836B
CCCCAACGGGCCTTATAATTTTGGGGTT
2._RUQ_836
____AA__GGGGCC__AA____GGCC__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAACCAGCTCTAAATGGAACCCCAACC
1._RUQ_836B
GGAACCAGCTCTAAATGGAACCCCAACC
2._RUQ_836
__________AGAA__GG__CC______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACAGAATTAGGTAGCCACATTTGGCCTT
1._RUQ_836B
ACAGAATTAGGTAGCCACATTTGGCCTT
2._RUQ_836
__AG____AG______AC__________
 57 58             
_Input profile
CCCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_836B
CCCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_836
____X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: IMC_55 RUQ_836

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._IMC_55 RUQ_836B

identical
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._IMC_55 RUQ_836

70.6 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1062 13TcSNP1053 14TcSNP1019 15TcSNP1010
16TcSNP999 17TcSNP998 18TcSNP945 19TcSNP899 20TcSNP872
21TcSNP836 22TcSNP835 23TcSNP823 24TcSNP800 25TcSNP739
26TcSNP731 27TcSNP723 28TcSNP702 29TcSNP660 30TcSNP645
31TcSNP644 32TcSNP642 33TcSNP640 34TcSNP602 35TcSNP591
36TcSNP589 37TcSNP577 38TcSNP546 39TcSNP529 40TcSNP522
41TcSNP519 42TcSNP421 43TcSNP363 44TcSNP329 45TcSNP305
46TcSNP290 47TcSNP230 48TcSNP194 49TcSNP189 50TcSNP176
51TcSNP144 52TcSNP143 53TcSNP131 54TcSNP52 55TcSNP49
56TcSNP33 57TcSNP19 58TcSNP13