| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | TT | GT | GT | AA | GT | CT | TT | AG | CT | AA | TT | CC | AA | GG |
1._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
2._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
3._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
4._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
5._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
6._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
7._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
8._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
9._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
10._MO_20 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | __ | AA | __ |
11._RUQ_1566 | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
12._MO_20 | __ | __ | GT | __ | __ | TT | __ | AG | __ | __ | __ | __ | AA | __ |
13._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
14._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
15._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
16._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
17._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
18._GC-08-167-4-10 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
19._GC-08-167-4-10 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
20._GC-08-167-4-10 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
21._GC-08-167-4-10 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
22._GC-01-121-6-18 | __ | __ | GT | __ | __ | CT | __ | AG | __ | __ | __ | CC | AA | __ |
23._RUQ_1566 | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
24._MO_20_Fld#_171_Plt#_1 | __ | __ | AC | __ | __ | __ | __ | AG | __ | __ | __ | __ | AA | __ |
25._RUQ_1566 | __ | __ | AC | __ | __ | __ | __ | AG | __ | __ | __ | __ | AA | __ |
26._MITC-000675 | __ | __ | AC | __ | __ | __ | __ | AG | __ | __ | __ | __ | AA | __ |
27._MO_20 | __ | __ | TT | __ | __ | CC | __ | GG | __ | __ | __ | __ | AA | __ |
28._MO_20_Fld#_74_Plt#_1 | __ | __ | AA | __ | __ | __ | __ | AA | __ | __ | __ | __ | AG | __ |
29._MO_20 | __ | __ | TT | __ | __ | CC | __ | GG | __ | __ | __ | __ | GG | __ |
30._GC-01-121-6-18 | __ | __ | TT | __ | __ | CC | __ | GG | __ | __ | __ | CC | GG | __ |
| 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AG | CG | CT | AT | CC | TT | CT | AG | GG | TT | CG | AA | CG | AG |
1._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
2._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
3._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
4._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
5._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
6._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
7._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
8._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
9._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
10._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | __ | __ | __ |
11._RUQ_1566 | __ | __ | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
12._MO_20 | __ | CG | __ | __ | __ | __ | __ | __ | GG | __ | __ | AA | __ | __ |
13._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
14._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
15._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
16._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
17._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
18._GC-08-167-4-10 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
19._GC-08-167-4-10 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
20._GC-08-167-4-10 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
21._GC-08-167-4-10 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | AA | __ | __ |
22._GC-01-121-6-18 | AG | CG | CG | __ | CC | __ | __ | AG | GG | CT | __ | __ | __ | __ |
23._RUQ_1566 | __ | CG | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
24._MO_20_Fld#_171_Plt#_1 | AG | CG | CG | __ | CC | __ | __ | AG | CC | __ | __ | __ | __ | __ |
25._RUQ_1566 | AG | CG | CG | __ | CC | __ | __ | AG | CC | __ | __ | __ | __ | __ |
26._MITC-000675 | AG | CG | CG | __ | CC | __ | __ | AG | CC | __ | __ | __ | __ | __ |
27._MO_20 | __ | CC | __ | __ | __ | __ | __ | __ | GT | __ | __ | AA | __ | __ |
28._MO_20_Fld#_74_Plt#_1 | AG | CC | CC | __ | CC | __ | __ | GG | CC | __ | __ | __ | __ | __ |
29._MO_20 | __ | GG | __ | __ | __ | __ | __ | __ | GG | __ | __ | GG | __ | __ |
30._GC-01-121-6-18 | GG | GG | GG | __ | AA | __ | __ | AA | GG | CT | __ | GG | __ | __ |
| 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | TT | CT | CC | AA | CG | AG | AC | CT | AC | CC | AC | AG | AA | TT |
1._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
2._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
3._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
4._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
5._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
6._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
7._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
8._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
9._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
10._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
11._RUQ_1566 | __ | __ | CC | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ |
12._MO_20 | __ | __ | CC | __ | CG | __ | AC | __ | __ | __ | __ | __ | __ | __ |
13._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
14._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
15._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
16._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
17._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
18._GC-08-167-4-10 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
19._GC-08-167-4-10 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
20._GC-08-167-4-10 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
21._GC-08-167-4-10 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
22._GC-01-121-6-18 | __ | CT | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
23._RUQ_1566 | __ | CT | CC | __ | CG | __ | __ | __ | __ | __ | __ | __ | __ | __ |
24._MO_20_Fld#_171_Plt#_1 | __ | AG | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
25._RUQ_1566 | __ | AG | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
26._MITC-000675 | __ | AG | CC | __ | CG | __ | AC | __ | __ | __ | __ | AG | __ | __ |
27._MO_20 | __ | __ | CC | __ | GG | __ | AA | __ | __ | __ | __ | __ | __ | __ |
28._MO_20_Fld#_74_Plt#_1 | __ | AG | CC | __ | CC | __ | CC | __ | __ | __ | __ | GG | __ | __ |
29._MO_20 | __ | __ | AC | __ | CC | __ | AA | __ | __ | __ | __ | __ | __ | __ |
30._GC-01-121-6-18 | __ | CC | AC | __ | CC | __ | AA | __ | __ | __ | __ | GG | __ | __ |
| 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AG | GT | AA | CT | AC | AT | TT | GG | CC | CT | AC | CT | AA | CT |
1._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
2._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
3._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
4._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
5._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
6._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
7._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
8._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
9._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
10._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
11._RUQ_1566 | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
12._MO_20 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
13._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
14._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
15._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
16._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
17._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
18._GC-08-167-4-10 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
19._GC-08-167-4-10 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
20._GC-08-167-4-10 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
21._GC-08-167-4-10 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
22._GC-01-121-6-18 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
23._RUQ_1566 | AG | __ | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
24._MO_20_Fld#_171_Plt#_1 | AG | __ | __ | __ | AC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
25._RUQ_1566 | AG | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
26._MITC-000675 | AG | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
27._MO_20 | AA | __ | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
28._MO_20_Fld#_74_Plt#_1 | AA | __ | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ | __ | __ |
29._MO_20 | GG | __ | __ | __ | AA | __ | __ | __ | __ | __ | __ | __ | __ | __ |
30._GC-01-121-6-18 | GG | __ | __ | __ | AA | __ | __ | __ | __ | __ | __ | __ | __ | __ |
| 57 | 58 | 59 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CC | AG | AG | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
1._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
2._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
3._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
4._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
5._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
6._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
7._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
8._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
9._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
10._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
11._RUQ_1566 | __ | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
12._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
13._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
14._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
15._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
16._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
17._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
18._GC-08-167-4-10 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
19._GC-08-167-4-10 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
20._GC-08-167-4-10 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
21._GC-08-167-4-10 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
22._GC-01-121-6-18 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
23._RUQ_1566 | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
24._MO_20_Fld#_171_Plt#_1 | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
25._RUQ_1566 | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
26._MITC-000675 | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
27._MO_20 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
28._MO_20_Fld#_74_Plt#_1 | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
29._MO_20 | CG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
30._GC-01-121-6-18 | CG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
| 1 | TcSNP1293 | 2 | TcSNP1275 | 3 | TcSNP1253 | 4 | TcSNP1230 | 5 | TcSNP1205 |
| 6 | TcSNP1144 | 7 | TcSNP1112 | 8 | TcSNP1062 | 9 | TcSNP1053 | 10 | TcSNP1019 |
| 11 | TcSNP1010 | 12 | TcSNP999 | 13 | TcSNP998 | 14 | TcSNP945 | 15 | TcSNP899 |
| 16 | TcSNP872 | 17 | TcSNP836 | 18 | TcSNP835 | 19 | TcSNP823 | 20 | TcSNP800 |
| 21 | TcSNP739 | 22 | TcSNP731 | 23 | TcSNP723 | 24 | TcSNP702 | 25 | TcSNP660 |
| 26 | TcSNP645 | 27 | TcSNP644 | 28 | TcSNP642 | 29 | TcSNP640 | 30 | TcSNP602 |
| 31 | TcSNP591 | 32 | TcSNP589 | 33 | TcSNP577 | 34 | TcSNP546 | 35 | TcSNP529 |
| 36 | TcSNP522 | 37 | TcSNP519 | 38 | TcSNP421 | 39 | TcSNP363 | 40 | TcSNP329 |
| 41 | TcSNP305 | 42 | TcSNP290 | 43 | TcSNP230 | 44 | TcSNP194 | 45 | TcSNP189 |
| 46 | TcSNP176 | 47 | TcSNP144 | 48 | TcSNP143 | 49 | TcSNP131 | 50 | TcSNP52 |
| 51 | TcSNP49 | 52 | TcSNP33 | 53 | TcSNP19 | 54 | TcSNP13 | 55 | TcSNP1527 |
| 56 | TcSNP1524 | 57 | TcSNP1458 | 58 | TcSNP1404 | 59 | TcSNP1401 |