SNP Profiles of NACIONAL View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	CC	GG	AG	AA	GT	TT	AA	GG	CC	CT	AG	CC
1._NA_232___	__	__	CC	__	__	__	__	TT	__	__	__	__	__	__
2._NA_232___	__	__	GG	__	__	__	__	__	__	__	__	__	__	__
3._NA_232___	__	__	GG	__	__	__	__	AA	__	__	__	__	AG	__
4._NA_232___	__	__	GG	__	__	__	__	AA	__	__	__	__	AG	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	TT	CC	AG	CG	GG	GG	TT	AT	AC	TT	TT	GG	GG
1._NA_232___	__	__	CC	AG	__	__	GG	__	__	AC	__	__	GG	GG
2._NA_232___	__	__	__	__	__	__	CC	__	__	__	__	__	__	__
3._NA_232___	__	__	__	AG	__	GG	CC	CC	__	AC	__	__	GG	CC
4._NA_232___	__	__	__	AG	__	GG	CC	CC	__	AC	__	__	GG	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	TT	CG	AA	CC	AA	CC	CC	AA	AA	GG	AA	CC	CT	AC
1._NA_232___	TT	__	__	__	__	__	CC	AA	__	GG	__	CC	__	__
2._NA_232___	__	__	__	__	__	__	CC	AA	__	GG	__	__	__	__
3._NA_232___	__	__	__	__	__	__	GG	AA	__	GG	__	CC	__	__
4._NA_232___	__	__	__	__	__	__	GG	AA	__	GG	__	CC	__	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	AC	GG	AA	CC	GG	GG	CC	CC	AA	TT	GG	CC	TT
1._NA_232___	__	__	GG	__	__	__	__	__	CC	__	__	__	__	__
2._NA_232___	__	__	__	__	__	__	__	__	CC	__	__	__	__	__
3._NA_232___	__	__	GG	__	__	__	__	__	CC	__	__	__	__	__
4._NA_232___	__	__	GG	__	__	__	__	__	CC	__	__	__	__	__

	57	58
_Input profile	AC	CT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._NA_232___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._NA_232___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._NA_232___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._NA_232___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: NA_232 RUQ_1504

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Nan
0.996

1._NA_232 RUQ_1504

identical
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._NA_232 RUQ_1504

66.7 %
6 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._NA_232 RUQ_1504

62.5 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

4._NA_232 MITC-000043

62.5 %
16 shared markers

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USDA-SHRS, United States of America

Mars, 2018

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP194	49	TcSNP189	50	TcSNP176
51	TcSNP144	52	TcSNP143	53	TcSNP131	54	TcSNP52	55	TcSNP49
56	TcSNP33	57	TcSNP19	58	TcSNP13

SNP Profiles of NACIONAL View Data

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Input profile: NA_232 RUQ_1504

1._NA_232 RUQ_1504

identical 15 shared markers

2._NA_232 RUQ_1504

66.7 % 6 shared markers

3._NA_232 RUQ_1504

62.5 % 16 shared markers

4._NA_232 MITC-000043

62.5 % 16 shared markers

identical
15 shared markers

66.7 %
6 shared markers

62.5 %
16 shared markers

62.5 %
16 shared markers