SNP Profiles of NA 399 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	TT	CG	GG	GG	TT	TT	TT	AA	GT	TT	TT	AA	CT
1._NA_399___	__	__	CG	__	__	__	__	TT	__	__	__	__	__	__
2._NA_399___	__	__	CC	__	__	__	__	AA	__	__	__	__	AA	__
3._NA_399___	__	__	GG	__	__	__	__	__	__	__	__	__	__	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AT	CT	CT	AA	CG	AG	CC	TT	AA	CC	TT	CT	GG	GG
1._NA_399___	__	__	__	AA	__	__	CC	__	__	CC	__	__	GG	GG
2._NA_399___	__	__	__	AA	__	AG	GG	CC	__	CC	__	__	GG	CC
3._NA_399___	__	__	__	__	__	__	CG	__	__	__	__	__	__	__

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	TT	CG	AG	CG	AA	TT	CC	AC	AT	CC	AG	CC	CT	CT
1._NA_399___	TT	__	__	__	__	__	CC	AA	__	CC	__	CC	__	__
2._NA_399___	__	__	__	__	__	__	GG	AC	__	CC	__	CC	__	__
3._NA_399___	__	__	__	__	__	__	CC	AC	__	GG	__	__	__	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AC	GG	AA	TT	GG	TT	AG	CT	CC	AT	TT	TT	AC	CC
1._NA_399___	__	GG	__	__	GG	__	__	__	CC	__	__	__	__	__
2._NA_399___	__	GG	__	__	GG	__	__	__	CC	__	__	__	__	__
3._NA_399___	__	__	__	__	AG	__	__	__	CC	__	__	__	__	__

	57	58
_Input profile	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._NA_399___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._NA_399___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._NA_399___	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: NA_399 RUQ_1572

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.696 Cri
0.299

1._NA_399 RUQ_1572

96.7 %
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._NA_399 RUQ_1572

67.6 %
17 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

3._NA_399 RUQ_1572

64.3 %
7 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP421	43	TcSNP363	44	TcSNP329	45	TcSNP305
46	TcSNP290	47	TcSNP230	48	TcSNP194	49	TcSNP189	50	TcSNP176
51	TcSNP144	52	TcSNP143	53	TcSNP131	54	TcSNP52	55	TcSNP49
56	TcSNP33	57	TcSNP19	58	TcSNP13