SNP Profiles of SC 1 [UNK]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATCTCGGGGGTTGGGTCTACGTCTTTAA
1._SC_1_[UNK]___
____CG________GT____________
2._SC_1_[UNK]___
____CC________AA__________AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCATTTCTAACGGGGGTTAACCCTCTAG
1._SC_1_[UNK]___
______CCAA____GG____CC____AG
2._SC_1_[UNK]___
________AA__GGCCCC__CC____AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GTCTCGAGCGAGTTCTCCATCGAGACCT
1._SC_1_[UNK]___
GTCT__________CTCC__GG__CC__
2._SC_1_[UNK]___
AC____________AGCC__CG__CC__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACCCACACTTAGGGAGCTACATGTTTCC
1._SC_1_[UNK]___
__________AG______AC________
2._SC_1_[UNK]___
__________AG______AC________
 57 58 59            
_Input profile
CTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._SC_1_[UNK]___
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._SC_1_[UNK]___
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: SC_1_[UNK] RUQ_41

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._SC_1_[UNK] RUQ_41

90 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._SC_1_[UNK] RUQ_41

62.5 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP305 47TcSNP290 48TcSNP230 49TcSNP194 50TcSNP189
51TcSNP176 52TcSNP144 53TcSNP143 54TcSNP131 55TcSNP52
56TcSNP49 57TcSNP33 58TcSNP19 59TcSNP13