SNP Profiles of GU 171/C View Data

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_Input profile	TT	AA	TT	AA	TT	GG	GG	AA	GG	TT	AA	TT	CC	TT
1._RUQ_195	__	__	__	__	__	GG	__	__	__	TT	__	__	__	__
2._RUQ_195	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
3._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
4._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
5._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
6._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
7._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
8._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
9._GU_171_/C	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
10._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
11._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
12._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
13._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
14._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
15._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
16._GC-01-094-5-11	__	__	__	__	__	GG	__	__	__	TT	__	__	CC	__
17._GC-01-94-5-11	__	__	__	__	__	CC	__	__	__	AA	__	__	__	__
18._GC-01-94-5-11	__	__	__	__	__	CC	__	__	__	AA	__	__	__	__
19._RUQ_195	__	__	__	__	__	CC	__	__	__	AA	__	__	__	__

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_Input profile	GG	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA
1._RUQ_195	__	__	__	CC	AA	__	GG	GG	__	__	AA	__	__	AA
2._RUQ_195	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
3._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
4._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
5._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
6._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
7._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
8._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
9._GU_171_/C	GG	__	__	__	AA	__	__	GG	__	__	__	__	__	__
10._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
11._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
12._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
13._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
14._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
15._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
16._GC-01-094-5-11	GG	__	__	CC	AA	__	GG	GG	GG	__	AA	__	__	AA
17._GC-01-94-5-11	GG	__	__	__	AA	__	GG	CC	CC	__	AA	__	__	AA
18._GC-01-94-5-11	GG	__	__	__	AA	__	GG	CC	CC	__	AA	__	__	AA
19._RUQ_195	GG	__	__	__	AA	__	GG	CC	CC	__	AA	__	__	AA

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_Input profile	GG	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AA	CT	CC
1._RUQ_195	GG	CC	__	__	__	__	__	CC	CC	__	CC	__	__	__
2._RUQ_195	GG	__	__	AA	__	__	__	__	CC	__	CC	__	__	__
3._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
4._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
5._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
6._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
7._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
8._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
9._GU_171_/C	GG	__	__	GG	__	__	__	__	CC	__	CC	__	__	__
10._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
11._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
12._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
13._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
14._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
15._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
16._GC-01-094-5-11	GG	CC	__	GG	__	__	__	CC	CC	__	CC	__	__	__
17._GC-01-94-5-11	CC	__	__	__	__	__	__	GG	CC	__	CC	__	__	__
18._GC-01-94-5-11	CC	__	__	__	__	__	__	GG	CC	__	CC	__	__	__
19._RUQ_195	CC	__	__	__	__	__	__	GG	CC	__	CC	__	__	__

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_Input profile	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
1._RUQ_195	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
2._RUQ_195	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
3._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
4._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
5._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
6._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
7._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
8._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
9._GU_171_/C	__	__	__	__	__	GG	__	__	__	AA	__	__	__	__
10._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
11._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
12._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
13._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
14._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
15._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
16._GC-01-094-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
17._GC-01-94-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
18._GC-01-94-5-11	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__
19._RUQ_195	__	__	GG	__	__	GG	__	__	__	AA	__	__	__	__

Input profile: GU_171_/C RUQ_195

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.996

1._GU_171_/C RUQ_195

identical
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._GU_171_/C RUQ_195

identical
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._GU_171_/C

91.7 %
12 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1511 2 > FP

Dapeng Zhang, 2016

4._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 7

Dapeng Zhang, 2016

5._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 9

Dapeng Zhang, 2016

6._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 12

Dapeng Zhang, 2016

7._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 14

Dapeng Zhang, 2016

8._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 1 > FP

Dapeng Zhang, 2016

9._GU_171_/C

91.7 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1511 10 > F

Dapeng Zhang, 2016

10._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

11._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

12._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

13._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

14._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

15._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP3

16._GU_171_/C GC-01-094-5-11

90 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

17._GU_171_/C GC-01-94-5-11

68.8 %
16 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 5, Rep: 11, Tree: 7

Notes: MCCS_Structure_refs_above_0.9membership

18._GU_171_/C GC-01-94-5-11

68.8 %
16 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1

Notes: Brazil_Selections_Poss_grandparent

19._GU_171_/C RUQ_195

68.8 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP33	2	TcSNP19	3	TcSNP13	4	TcSNP1527	5	TcSNP1524
6	TcSNP1458	7	TcSNP1404	8	TcSNP1401	9	TcSNP1275	10	TcSNP1253
11	TcSNP1230	12	TcSNP1205	13	TcSNP1144	14	TcSNP1112	15	TcSNP1062
16	TcSNP1019	17	TcSNP1010	18	TcSNP999	19	TcSNP998	20	TcSNP945
21	TcSNP899	22	TcSNP872	23	TcSNP836	24	TcSNP835	25	TcSNP823
26	TcSNP800	27	TcSNP739	28	TcSNP731	29	TcSNP723	30	TcSNP702
31	TcSNP660	32	TcSNP645	33	TcSNP644	34	TcSNP642	35	TcSNP640
36	TcSNP602	37	TcSNP591	38	TcSNP589	39	TcSNP577	40	TcSNP546
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49