SNP Profiles of BE 8 View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CT	GG	GG	GG	TT	TT	TT	CT	AA	TT	TT	TT	AA
1._MAR_9___	__	__	GG	__	__	__	__	TT	__	__	__	__	__	__
2._MAR_9___	__	__	GG	__	__	__	__	__	__	__	__	__	__	AA
3._MAR_9___	__	__	CC	__	__	__	__	AA	__	__	__	__	__	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	CC	TT	AA	CC	GG	GG	TT	AA	AA	TT	TT	GG
1._MAR_9___	__	__	__	TT	AA	__	__	GG	__	__	AA	__	__	GG
2._MAR_9___	__	__	__	__	AA	__	__	__	TT	__	__	__	__	__
3._MAR_9___	__	__	__	__	AA	__	GG	CC	CC	__	AA	__	__	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	TT	GG	AA	CC	AA	TT	CC	AA	TT	GG	GG	TT	CC
1._MAR_9___	GG	TT	__	__	__	__	__	CC	AA	__	GG	__	__	__
2._MAR_9___	GG	__	__	AA	__	__	__	__	__	__	GG	__	__	__
3._MAR_9___	CC	__	__	__	__	__	__	GG	AA	__	GG	__	__	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	TT	TT	CC
1._MAR_9___	__	__	GG	__	__	AA	__	__	__	CC	__	__	__	__
2._MAR_9___	__	__	__	__	__	AA	__	__	__	__	__	__	__	__
3._MAR_9___	__	__	GG	__	__	AA	__	__	__	CC	__	__	__	__

	57	58	59
_Input profile	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._MAR_9___	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._MAR_9___	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._MAR_9___	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: MAR_9 RUQ_557

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

1._MAR_9 RUQ_557

identical
15 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._MAR_9

identical
8 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B220 T3

Dapeng Zhang, 2014

3._MAR_9 RUQ_557

62.5 %
16 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1237	10	TcSNP1230
11	TcSNP1205	12	TcSNP1144	13	TcSNP1112	14	TcSNP1062	15	TcSNP1053
16	TcSNP1019	17	TcSNP1010	18	TcSNP999	19	TcSNP998	20	TcSNP945
21	TcSNP899	22	TcSNP872	23	TcSNP836	24	TcSNP835	25	TcSNP823
26	TcSNP800	27	TcSNP739	28	TcSNP731	29	TcSNP723	30	TcSNP702
31	TcSNP660	32	TcSNP645	33	TcSNP644	34	TcSNP642	35	TcSNP640
36	TcSNP602	37	TcSNP591	38	TcSNP589	39	TcSNP577	40	TcSNP546
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49	57	TcSNP33	58	TcSNP19	59	TcSNP13