SNP Profiles of GU 123 /V View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	GG	GG	AA	TT	GG	TT	AA	CC	TT	GG	CC	AA
1._RUQ_187	__	__	GG	__	__	__	__	TT	__	__	__	__	__	__
2._RUQ_1068	__	__	GG	__	__	__	__	TT	__	__	__	__	__	__
3._RUQ_187	AA	TT	GG	GG	AA	TT	GG	TT	AA	CC	TT	GG	CC	AA
4._RUQ_1068	__	__	CC	__	__	__	__	AA	__	__	__	GG	__	__
5._MITC-000597	__	__	CC	__	__	__	__	AA	__	__	__	GG	__	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG	CC	CC	AA
1._RUQ_187	CC	__	__	GG	__	__	AA	__	__	AA	GG	CC	__	__
2._RUQ_1068	CC	__	__	GG	__	__	AA	__	__	AA	GG	CC	__	__
3._RUQ_187	CC	CC	GG	GG	CC	AA	AA	TT	CC	AA	GG	CC	CC	AA
4._RUQ_1068	__	__	GG	CC	CC	__	AA	__	__	AA	CC	__	__	__
5._MITC-000597	__	__	GG	CC	CC	__	AA	__	__	AA	CC	__	__	__

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	GG	CC	CC	CC	AA	CC	AG	AA	TT	CC	TT	GG	AA
1._RUQ_187	__	__	__	CC	CC	__	CC	__	AA	__	__	__	GG	__
2._RUQ_1068	__	__	__	CC	CC	__	CC	__	AA	__	__	__	GG	__
3._RUQ_187	CC	GG	CT	CC	CC	AT	CC	AG	AA	CC	AC	TT	GG	AA
4._RUQ_1068	__	__	__	GG	CC	__	CC	__	AA	__	__	__	GG	__
5._MITC-000597	__	__	__	GG	CC	__	CC	__	AA	__	__	__	GG	__

	43	44	45	46	47	48	49	50	51	52	53	54	55
_Input profile	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	CC	TT	X_X
1._RUQ_187	__	GG	__	__	__	AA	__	__	__	__	__	__	__	X_X
2._RUQ_1068	__	GG	__	__	__	AA	__	__	__	__	__	__	__	X_X
3._RUQ_187	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC	TT	CC	TT	X_X
4._RUQ_1068	__	GG	__	__	__	AA	__	__	__	__	__	__	__	X_X
5._MITC-000597	__	GG	__	__	__	AA	__	__	__	__	__	__	__	X_X

Input profile: GU_123_/V RUQ_1068

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

GU
0.997

1._GU_123_/V RUQ_187

identical
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._GU_123_/V RUQ_1068

identical
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._GU_123_/V RUQ_187

94.5 %
55 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

GU
0.998

4._GU_123_/V RUQ_1068

68.8 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

5._GU_123_/V MITC-000597

68.8 %
16 shared markers

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USDA-SHRS, United States of America

Mars, 2018

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1144
11	TcSNP1112	12	TcSNP1062	13	TcSNP1053	14	TcSNP1019	15	TcSNP999
16	TcSNP945	17	TcSNP899	18	TcSNP872	19	TcSNP836	20	TcSNP835
21	TcSNP823	22	TcSNP800	23	TcSNP739	24	TcSNP731	25	TcSNP723
26	TcSNP702	27	TcSNP660	28	TcSNP645	29	TcSNP644	30	TcSNP642
31	TcSNP640	32	TcSNP602	33	TcSNP591	34	TcSNP589	35	TcSNP577
36	TcSNP546	37	TcSNP529	38	TcSNP522	39	TcSNP519	40	TcSNP421
41	TcSNP329	42	TcSNP305	43	TcSNP290	44	TcSNP230	45	TcSNP194
46	TcSNP189	47	TcSNP176	48	TcSNP144	49	TcSNP143	50	TcSNP131
51	TcSNP52	52	TcSNP49	53	TcSNP33	54	TcSNP19	55	TcSNP13

SNP Profiles of GU 123 /V View Data

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Input profile: GU_123_/V RUQ_1068

1._GU_123_/V RUQ_187

identical 15 shared markers

2._GU_123_/V RUQ_1068

identical 15 shared markers

3._GU_123_/V RUQ_187

94.5 % 55 shared markers

4._GU_123_/V RUQ_1068

68.8 % 16 shared markers

5._GU_123_/V MITC-000597

68.8 % 16 shared markers

identical
15 shared markers

identical
15 shared markers

94.5 %
55 shared markers

68.8 %
16 shared markers

68.8 %
16 shared markers